Protein–RNA interactions for Protein: P38784

VMA22, Vacuolar ATPase assembly protein VMA22, yeastyeast

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA22P38784 NSR1YGR159C 1245 nt17.07■□□□□ 0.32
VMA22P38784 YML009W-BYML009W-B 477 nt16.28■□□□□ 0.2
VMA22P38784 MDJ1YFL016C 1536 nt16.07■□□□□ 0.16
VMA22P38784 NOP1YDL014W 984 nt15.42■□□□□ 0.06
VMA22P38784 SSA3YBL075C 1950 nt15.06■□□□□ 0
VMA22P38784 YJL027CYJL027C 417 nt14.69□□□□□ -0.06
VMA22P38784 YBR190WYBR190W 312 nt13.96□□□□□ -0.17
VMA22P38784 DBP2YNL112W 1641 nt13.9□□□□□ -0.18
VMA22P38784 YKL036CYKL036C 393 nt13.65□□□□□ -0.22
VMA22P38784 RTC3YHR087W 336 nt13.52□□□□□ -0.25
VMA22P38784 SRX1YKL086W 384 nt13.52□□□□□ -0.25
VMA22P38784 PUT4YOR348C 1884 nt13.48□□□□□ -0.25
VMA22P38784 Q0297Q0297 156 nt13.25□□□□□ -0.29
VMA22P38784 SPT5YML010W 3192 nt13.15□□□□□ -0.3
VMA22P38784 SSA4YER103W 1929 nt13.07□□□□□ -0.32
VMA22P38784 ARE1YCR048W 1833 nt12.93□□□□□ -0.34
VMA22P38784 POA1YBR022W 534 nt12.92□□□□□ -0.34
VMA22P38784 BSC6YOL137W 1494 nt12.85□□□□□ -0.35
VMA22P38784 TRN1tP(UGG)A 72 nt12.83□□□□□ -0.36
VMA22P38784 SUF9tP(UGG)F 72 nt12.83□□□□□ -0.36
VMA22P38784 SUF8tP(UGG)H 72 nt12.83□□□□□ -0.36
VMA22P38784 tP(UGG)LtP(UGG)L 72 nt12.83□□□□□ -0.36
VMA22P38784 SUF7tP(UGG)M 72 nt12.83□□□□□ -0.36
VMA22P38784 tP(UGG)N1tP(UGG)N1 72 nt12.83□□□□□ -0.36
VMA22P38784 tP(UGG)N2tP(UGG)N2 72 nt12.83□□□□□ -0.36
VMA22P38784 tP(UGG)O1tP(UGG)O1 72 nt12.83□□□□□ -0.36
VMA22P38784 SUF11tP(UGG)O2 72 nt12.83□□□□□ -0.36
VMA22P38784 BDF1YLR399C 2061 nt12.74□□□□□ -0.37
VMA22P38784 YHR049C-AYHR049C-A 297 nt12.72□□□□□ -0.37
VMA22P38784 RVS167YDR388W 1449 nt12.71□□□□□ -0.37
VMA22P38784 YCR051WYCR051W 669 nt12.69□□□□□ -0.38
VMA22P38784 CCC1YLR220W 969 nt12.6□□□□□ -0.39
VMA22P38784 PAC11YDR488C 1602 nt12.57□□□□□ -0.4
VMA22P38784 SAH1YER043C 1350 nt12.56□□□□□ -0.4
VMA22P38784 SCJ1YMR214W 1134 nt12.56□□□□□ -0.4
VMA22P38784 TAT1YBR069C 1860 nt12.54□□□□□ -0.4
VMA22P38784 URN1YPR152C 1398 nt12.47□□□□□ -0.41
VMA22P38784 OPI9YLR338W 858 nt12.4□□□□□ -0.42
VMA22P38784 NVJ2YPR091C 2313 nt12.37□□□□□ -0.43
VMA22P38784 SCS3YGL126W 1143 nt12.33□□□□□ -0.44
VMA22P38784 BUD23YCR047C 828 nt12.29□□□□□ -0.44
VMA22P38784 MEP2YNL142W 1500 nt12.18□□□□□ -0.46
VMA22P38784 SHR5YOL110W 714 nt12.1□□□□□ -0.47
VMA22P38784 DEP1YAL013W 1218 nt12.05□□□□□ -0.48
VMA22P38784 PTC2YER089C 1395 nt12.03□□□□□ -0.48
VMA22P38784 NAB2YGL122C 1578 nt12.01□□□□□ -0.49
VMA22P38784 PUN1YLR414C 792 nt12□□□□□ -0.49
VMA22P38784 DCW1YKL046C 1350 nt11.97□□□□□ -0.49
VMA22P38784 YBR220CYBR220C 1683 nt11.93□□□□□ -0.5
VMA22P38784 RPN10YHR200W 807 nt11.9□□□□□ -0.5
VMA22P38784 RPP1BYDL130W 321 nt11.87□□□□□ -0.51
VMA22P38784 FPS1YLL043W 2010 nt11.81□□□□□ -0.52
VMA22P38784 FIS1YIL065C 468 nt11.8□□□□□ -0.52
VMA22P38784 YOL085CYOL085C 342 nt11.8□□□□□ -0.52
VMA22P38784 tP(UGG)O3tP(UGG)O3 72 nt11.79□□□□□ -0.52
VMA22P38784 YNL208WYNL208W 600 nt11.77□□□□□ -0.53
VMA22P38784 EMI2YDR516C 1503 nt11.76□□□□□ -0.53
VMA22P38784 PCH2YBR186W 1695 nt11.74□□□□□ -0.53
VMA22P38784 GUT2YIL155C 1950 nt11.73□□□□□ -0.53
VMA22P38784 YPS1YLR120C 1710 nt11.72□□□□□ -0.53
VMA22P38784 YJR018WYJR018W 363 nt11.72□□□□□ -0.53
VMA22P38784 YMR090WYMR090W 684 nt11.69□□□□□ -0.54
VMA22P38784 DAL1YIR027C 1383 nt11.67□□□□□ -0.54
VMA22P38784 SDH1YKL148C 1923 nt11.66□□□□□ -0.54
VMA22P38784 SSA1YAL005C 1929 nt11.62□□□□□ -0.55
VMA22P38784 YDL221WYDL221W 552 nt11.6□□□□□ -0.55
VMA22P38784 SEC11YIR022W 504 nt11.6□□□□□ -0.55
VMA22P38784 PIB2YGL023C 1908 nt11.59□□□□□ -0.55
VMA22P38784 YHR165W-AYHR165W-A 312 nt11.58□□□□□ -0.56
VMA22P38784 PHO4YFR034C 939 nt11.57□□□□□ -0.56
VMA22P38784 PKP1YIL042C 1185 nt11.56□□□□□ -0.56
VMA22P38784 FPR4YLR449W 1179 nt11.54□□□□□ -0.56
VMA22P38784 UME6YDR207C 2511 nt11.51□□□□□ -0.57
VMA22P38784 YDR095CYDR095C 411 nt11.49□□□□□ -0.57
VMA22P38784 PET122YER153C 765 nt11.47□□□□□ -0.57
VMA22P38784 CAC2YML102W 1407 nt11.45□□□□□ -0.58
VMA22P38784 YJR120WYJR120W 351 nt11.44□□□□□ -0.58
VMA22P38784 YDJ1YNL064C 1230 nt11.43□□□□□ -0.58
VMA22P38784 INM2YDR287W 879 nt11.42□□□□□ -0.58
VMA22P38784 SCC4YER147C 1875 nt11.42□□□□□ -0.58
VMA22P38784 PTP1YDL230W 1008 nt11.38□□□□□ -0.59
VMA22P38784 RTF1YGL244W 1677 nt11.33□□□□□ -0.6
VMA22P38784 IRC15YPL017C 1500 nt11.3□□□□□ -0.6
VMA22P38784 YSC84YHR016C 1407 nt11.28□□□□□ -0.6
VMA22P38784 GAR1YHR089C 618 nt11.28□□□□□ -0.6
VMA22P38784 RPP2AYOL039W 321 nt11.24□□□□□ -0.61
VMA22P38784 PTK1YKL198C 1989 nt11.23□□□□□ -0.61
VMA22P38784 YHL050CYHL050C 2094 nt11.23□□□□□ -0.61
VMA22P38784 GIS3YLR094C 1509 nt11.22□□□□□ -0.61
VMA22P38784 BOR1YNL275W 1731 nt11.22□□□□□ -0.61
VMA22P38784 RPP2BYDR382W 333 nt11.17□□□□□ -0.62
VMA22P38784 BOP3YNL042W 1191 nt11.15□□□□□ -0.62
VMA22P38784 YBL100CYBL100C 315 nt11.15□□□□□ -0.62
VMA22P38784 YJL225CYJL225C 5277 nt11.09□□□□□ -0.63
VMA22P38784 ATS1YAL020C 1002 nt11.04□□□□□ -0.64
VMA22P38784 SCR1SCR1 522 nt11.04□□□□□ -0.64
VMA22P38784 MCH5YOR306C 1566 nt11.03□□□□□ -0.64
VMA22P38784 RRT12YCR045C 1476 nt11.03□□□□□ -0.64
VMA22P38784 RRN5YLR141W 1092 nt11.02□□□□□ -0.65
VMA22P38784 FUN26YAL022C 1554 nt11.01□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms