RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	YIL177C	P40434	1758 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	YJL225C	P40889	1758 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	AAC1	P04710	309 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	WHI2	P12611	486 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	STE12	P13574	688 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	YEL043W	P32618	956 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	MFT1	P33441	392 aa	Known RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	RFT1	P38206	574 aa	Predicted RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	IFA38	P38286	347 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	TDP1	P38319	544 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	ARO9	P38840	513 aa	Predicted RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	CAJ1	P39101	391 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	CIN4	P39110	191 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	FAF1	P40546	346 aa	Predicted RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	YPT11	P48559	417 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	RRT6	P53117	311 aa	Predicted RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	TAM41	P53230	385 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	CPR8	P53728	308 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	SUB1	P54000	292 aa	Known RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	YPL108W	Q02872	168 aa	Predicted RBP	3.59	□□□□□ -1.83
CMD1	YBR109C	RRI2	Q12348	645 aa		3.59	□□□□□ -1.83
CMD1	YBR109C	DUR1,2	P32528	1835 aa	Known RBP	3.58	□□□□□ -1.84
CMD1	YBR109C	PET122	P10355	254 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	RNR3	P21672	869 aa	Known RBP	3.58	□□□□□ -1.84
CMD1	YBR109C	RDS1	P25611	832 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	SSH4	P32343	579 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	TMT1	P32643	299 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	YML119W	Q03208	357 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	CSR1	Q06705	408 aa	Known RBP	3.58	□□□□□ -1.84
CMD1	YBR109C	YDL121C	Q07541	149 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	SUT2	Q12286	268 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	NBL1	Q3E7Y6	73 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	YER175W-A	Q8TGU4	54 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	SAC3	P46674	1301 aa		3.58	□□□□□ -1.84
CMD1	YBR109C	FRS2	P15625	503 aa	Known RBP	3.57	□□□□□ -1.84
CMD1	YBR109C	AMD2	P22580	549 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	NFU1	P32860	256 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	MRPL36	P36531	177 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	MAL33	P38157	468 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	VPS8	P39702	1274 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	NOC2	P39744	710 aa	Known RBP	3.57	□□□□□ -1.84
CMD1	YBR109C	YER130C	P39959	443 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	YEL020C	P39994	560 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	FYV8	P46949	817 aa	Known RBP	3.57	□□□□□ -1.84
CMD1	YBR109C	RTC4	P53850	401 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	ZDS2	P54786	942 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	ARG7	Q04728	441 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	GFD1	Q04839	188 aa	Known RBP	3.57	□□□□□ -1.84
CMD1	YBR109C	VID22	Q05934	901 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	SPN1	Q06505	410 aa	Predicted RBP	3.57	□□□□□ -1.84
CMD1	YBR109C	CRT10	Q08226	957 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	PCL8	Q08966	492 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	NKP1	Q12493	238 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	PCD1	Q12524	340 aa		3.57	□□□□□ -1.84
CMD1	YBR109C	HSP82	P02829	709 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	RPL7A	P05737	244 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	SNF1	P06782	633 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	GPA1	P08539	472 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	RNA1	P11745	407 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
CMD1	YBR109C	PET123	P17558	318 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	MDM10	P18409	493 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	PMA2	P19657	947 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	CLB1	P24868	471 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	URK1	P27515	501 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	DEP1	P31385	405 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	IMP2'	P32351	346 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	GDA1	P32621	518 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	RRN3	P36070	627 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	LNP1	P38878	278 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	VID27	P40157	782 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	RAD26	P40352	1085 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	YFL015C	P43578	164 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	MAL13	P53338	473 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	VPS75	P53853	264 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	ALF1	P53904	254 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	ADE16	P54113	591 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	UBP16	Q02863	499 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	COG4	Q06096	861 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	DIB1	Q06819	143 aa	Predicted RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	VAM6	Q07468	1049 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	TRM8	Q12009	286 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	TAH18	Q12181	623 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	RPL7B	Q12213	244 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	COX17	Q12287	69 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	CEX1	Q12453	761 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	YBR255C-A	Q3E776	120 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	PNO1	Q99216	274 aa	Known RBP	3.56	□□□□□ -1.84
CMD1	YBR109C	Q0010	Q9ZZX9	128 aa		3.56	□□□□□ -1.84
CMD1	YBR109C	SSK22	P25390	1331 aa	Predicted RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	RPN13	O13563	156 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	CHO2	P05374	869 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	GUK1	P15454	187 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	KGD2	P19262	463 aa	Predicted RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	PDE1	P22434	369 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	SAT4	P25333	603 aa	Known RBP	3.55	□□□□□ -1.84
CMD1	YBR109C	GSY2	P27472	705 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	RAD16	P31244	790 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	YMC1	P32331	307 aa		3.55	□□□□□ -1.84
CMD1	YBR109C	SAC6	P32599	642 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms