Protein–RNA interactions for Protein: P38878

LNP1, Endoplasmic reticulum junction formation protein lunapark, yeastyeast

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LNP1P38878 NSR1YGR159C 1245 nt17.28■□□□□ 0.36
LNP1P38878 YML009W-BYML009W-B 477 nt17.28■□□□□ 0.36
LNP1P38878 NOP1YDL014W 984 nt16.77■□□□□ 0.28
LNP1P38878 MDJ1YFL016C 1536 nt15.45■□□□□ 0.06
LNP1P38878 YKL036CYKL036C 393 nt15.3■□□□□ 0.04
LNP1P38878 SRX1YKL086W 384 nt14.6□□□□□ -0.07
LNP1P38878 Q0297Q0297 156 nt14.57□□□□□ -0.08
LNP1P38878 YJL027CYJL027C 417 nt14.3□□□□□ -0.12
LNP1P38878 YCR051WYCR051W 669 nt13.89□□□□□ -0.19
LNP1P38878 SCS3YGL126W 1143 nt13.87□□□□□ -0.19
LNP1P38878 SSA3YBL075C 1950 nt13.86□□□□□ -0.19
LNP1P38878 DBP2YNL112W 1641 nt13.56□□□□□ -0.24
LNP1P38878 TRN1tP(UGG)A 72 nt13.26□□□□□ -0.29
LNP1P38878 SUF9tP(UGG)F 72 nt13.26□□□□□ -0.29
LNP1P38878 SUF8tP(UGG)H 72 nt13.26□□□□□ -0.29
LNP1P38878 tP(UGG)LtP(UGG)L 72 nt13.26□□□□□ -0.29
LNP1P38878 SUF7tP(UGG)M 72 nt13.26□□□□□ -0.29
LNP1P38878 tP(UGG)N1tP(UGG)N1 72 nt13.26□□□□□ -0.29
LNP1P38878 tP(UGG)N2tP(UGG)N2 72 nt13.26□□□□□ -0.29
LNP1P38878 tP(UGG)O1tP(UGG)O1 72 nt13.26□□□□□ -0.29
LNP1P38878 SUF11tP(UGG)O2 72 nt13.26□□□□□ -0.29
LNP1P38878 YOL085CYOL085C 342 nt13.23□□□□□ -0.29
LNP1P38878 YBR190WYBR190W 312 nt13.23□□□□□ -0.29
LNP1P38878 CCC1YLR220W 969 nt13.19□□□□□ -0.3
LNP1P38878 RPP1BYDL130W 321 nt13.09□□□□□ -0.31
LNP1P38878 PKP1YIL042C 1185 nt13.06□□□□□ -0.32
LNP1P38878 RTC3YHR087W 336 nt12.98□□□□□ -0.33
LNP1P38878 RVS167YDR388W 1449 nt12.85□□□□□ -0.35
LNP1P38878 SCJ1YMR214W 1134 nt12.62□□□□□ -0.39
LNP1P38878 tP(UGG)O3tP(UGG)O3 72 nt12.52□□□□□ -0.41
LNP1P38878 PET122YER153C 765 nt12.51□□□□□ -0.41
LNP1P38878 PUT4YOR348C 1884 nt12.46□□□□□ -0.41
LNP1P38878 ATS1YAL020C 1002 nt12.46□□□□□ -0.41
LNP1P38878 SCR1SCR1 522 nt12.41□□□□□ -0.42
LNP1P38878 SHR5YOL110W 714 nt12.31□□□□□ -0.44
LNP1P38878 RRN5YLR141W 1092 nt12.14□□□□□ -0.47
LNP1P38878 YDJ1YNL064C 1230 nt12.11□□□□□ -0.47
LNP1P38878 URN1YPR152C 1398 nt12.06□□□□□ -0.48
LNP1P38878 POA1YBR022W 534 nt12.06□□□□□ -0.48
LNP1P38878 ARE1YCR048W 1833 nt12.04□□□□□ -0.48
LNP1P38878 Q0182Q0182 405 nt12.03□□□□□ -0.48
LNP1P38878 DEP1YAL013W 1218 nt12.02□□□□□ -0.49
LNP1P38878 YHR049C-AYHR049C-A 297 nt11.93□□□□□ -0.5
LNP1P38878 BSC6YOL137W 1494 nt11.92□□□□□ -0.5
LNP1P38878 RPN10YHR200W 807 nt11.9□□□□□ -0.5
LNP1P38878 OPI9YLR338W 858 nt11.9□□□□□ -0.5
LNP1P38878 YER088W-BYER088W-B 147 nt11.89□□□□□ -0.51
LNP1P38878 SAH1YER043C 1350 nt11.89□□□□□ -0.51
LNP1P38878 GAR1YHR089C 618 nt11.88□□□□□ -0.51
LNP1P38878 RSB1YOR049C 1065 nt11.88□□□□□ -0.51
LNP1P38878 YNL208WYNL208W 600 nt11.82□□□□□ -0.52
LNP1P38878 PAC11YDR488C 1602 nt11.8□□□□□ -0.52
LNP1P38878 SPT5YML010W 3192 nt11.75□□□□□ -0.53
LNP1P38878 NVJ2YPR091C 2313 nt11.74□□□□□ -0.53
LNP1P38878 SSA4YER103W 1929 nt11.73□□□□□ -0.53
LNP1P38878 BUD23YCR047C 828 nt11.63□□□□□ -0.55
LNP1P38878 PUN1YLR414C 792 nt11.58□□□□□ -0.56
LNP1P38878 FPS1YLL043W 2010 nt11.57□□□□□ -0.56
LNP1P38878 YJR018WYJR018W 363 nt11.51□□□□□ -0.57
LNP1P38878 PST2YDR032C 597 nt11.49□□□□□ -0.57
LNP1P38878 TIR1YER011W 765 nt11.49□□□□□ -0.57
LNP1P38878 MOT3YMR070W 1473 nt11.49□□□□□ -0.57
LNP1P38878 PTC2YER089C 1395 nt11.44□□□□□ -0.58
LNP1P38878 BDF1YLR399C 2061 nt11.4□□□□□ -0.58
LNP1P38878 NAB2YGL122C 1578 nt11.37□□□□□ -0.59
LNP1P38878 SSA1YAL005C 1929 nt11.34□□□□□ -0.59
LNP1P38878 RPP2BYDR382W 333 nt11.28□□□□□ -0.6
LNP1P38878 MEP2YNL142W 1500 nt11.25□□□□□ -0.61
LNP1P38878 YJL225CYJL225C 5277 nt11.23□□□□□ -0.61
LNP1P38878 TAT1YBR069C 1860 nt11.21□□□□□ -0.61
LNP1P38878 YJR120WYJR120W 351 nt11.19□□□□□ -0.62
LNP1P38878 YKL097CYKL097C 411 nt11.19□□□□□ -0.62
LNP1P38878 FPR4YLR449W 1179 nt11.16□□□□□ -0.62
LNP1P38878 DAL1YIR027C 1383 nt11.15□□□□□ -0.63
LNP1P38878 INM2YDR287W 879 nt11.13□□□□□ -0.63
LNP1P38878 FIS1YIL065C 468 nt11.1□□□□□ -0.63
LNP1P38878 SRB2YHR041C 633 nt11.05□□□□□ -0.64
LNP1P38878 DCW1YKL046C 1350 nt11.04□□□□□ -0.64
LNP1P38878 PHO4YFR034C 939 nt11.03□□□□□ -0.64
LNP1P38878 SHU1YHL006C 453 nt10.99□□□□□ -0.65
LNP1P38878 YBL100CYBL100C 315 nt10.99□□□□□ -0.65
LNP1P38878 YPS1YLR120C 1710 nt10.98□□□□□ -0.65
LNP1P38878 BDH2YAL061W 1254 nt10.98□□□□□ -0.65
LNP1P38878 RDN37-1RDN37-1 5354 nt10.97□□□□□ -0.65
LNP1P38878 RDN37-2RDN37-2 5354 nt10.97□□□□□ -0.65
LNP1P38878 YHR165W-AYHR165W-A 312 nt10.96□□□□□ -0.65
LNP1P38878 WWM1YFL010C 636 nt10.94□□□□□ -0.66
LNP1P38878 YMR090WYMR090W 684 nt10.94□□□□□ -0.66
LNP1P38878 EMI2YDR516C 1503 nt10.9□□□□□ -0.66
LNP1P38878 YBR220CYBR220C 1683 nt10.9□□□□□ -0.66
LNP1P38878 YAL037C-BYAL037C-B 975 nt10.88□□□□□ -0.67
LNP1P38878 YGR021WYGR021W 873 nt10.87□□□□□ -0.67
LNP1P38878 UME6YDR207C 2511 nt10.85□□□□□ -0.67
LNP1P38878 TRM9YML014W 840 nt10.84□□□□□ -0.67
LNP1P38878 FUN26YAL022C 1554 nt10.84□□□□□ -0.67
LNP1P38878 YDR095CYDR095C 411 nt10.81□□□□□ -0.68
LNP1P38878 LSM3YLR438C-A 270 nt10.81□□□□□ -0.68
LNP1P38878 YFL021C-AYFL021C-A 855 nt10.78□□□□□ -0.68
LNP1P38878 HOM6YJR139C 1080 nt10.77□□□□□ -0.69
LNP1P38878 ALF1YNL148C 765 nt10.77□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms