Protein–RNA interactions for Protein: Q07468

VAM6, Vacuolar morphogenesis protein 6, yeastyeast

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAM6Q07468 YML009W-BYML009W-B 477 nt20.07■□□□□ 0.8
VAM6Q07468 NSR1YGR159C 1245 nt20.02■□□□□ 0.8
VAM6Q07468 NOP1YDL014W 984 nt19.43■□□□□ 0.7
VAM6Q07468 MDJ1YFL016C 1536 nt17.93■□□□□ 0.46
VAM6Q07468 YKL036CYKL036C 393 nt17.82■□□□□ 0.44
VAM6Q07468 SRX1YKL086W 384 nt16.98■□□□□ 0.31
VAM6Q07468 Q0297Q0297 156 nt16.97■□□□□ 0.31
VAM6Q07468 YJL027CYJL027C 417 nt16.62■□□□□ 0.25
VAM6Q07468 SCS3YGL126W 1143 nt16.17■□□□□ 0.18
VAM6Q07468 YCR051WYCR051W 669 nt16.11■□□□□ 0.17
VAM6Q07468 DBP2YNL112W 1641 nt15.8■□□□□ 0.12
VAM6Q07468 TRN1tP(UGG)A 72 nt15.45■□□□□ 0.06
VAM6Q07468 SUF9tP(UGG)F 72 nt15.45■□□□□ 0.06
VAM6Q07468 SUF8tP(UGG)H 72 nt15.45■□□□□ 0.06
VAM6Q07468 tP(UGG)LtP(UGG)L 72 nt15.45■□□□□ 0.06
VAM6Q07468 SUF7tP(UGG)M 72 nt15.45■□□□□ 0.06
VAM6Q07468 tP(UGG)N1tP(UGG)N1 72 nt15.45■□□□□ 0.06
VAM6Q07468 tP(UGG)N2tP(UGG)N2 72 nt15.45■□□□□ 0.06
VAM6Q07468 tP(UGG)O1tP(UGG)O1 72 nt15.45■□□□□ 0.06
VAM6Q07468 SUF11tP(UGG)O2 72 nt15.45■□□□□ 0.06
VAM6Q07468 YOL085CYOL085C 342 nt15.45■□□□□ 0.06
VAM6Q07468 YBR190WYBR190W 312 nt15.29■□□□□ 0.04
VAM6Q07468 SSA3YBL075C 1950 nt15.29■□□□□ 0.04
VAM6Q07468 CCC1YLR220W 969 nt15.28■□□□□ 0.04
VAM6Q07468 PKP1YIL042C 1185 nt15.24■□□□□ 0.03
VAM6Q07468 RPP1BYDL130W 321 nt15.23■□□□□ 0.03
VAM6Q07468 RTC3YHR087W 336 nt14.96□□□□□ -0.01
VAM6Q07468 RVS167YDR388W 1449 nt14.82□□□□□ -0.04
VAM6Q07468 SCJ1YMR214W 1134 nt14.75□□□□□ -0.05
VAM6Q07468 PET122YER153C 765 nt14.58□□□□□ -0.08
VAM6Q07468 tP(UGG)O3tP(UGG)O3 72 nt14.56□□□□□ -0.08
VAM6Q07468 ATS1YAL020C 1002 nt14.42□□□□□ -0.1
VAM6Q07468 SCR1SCR1 522 nt14.37□□□□□ -0.11
VAM6Q07468 SHR5YOL110W 714 nt14.27□□□□□ -0.13
VAM6Q07468 RRN5YLR141W 1092 nt14.14□□□□□ -0.15
VAM6Q07468 YDJ1YNL064C 1230 nt14.08□□□□□ -0.16
VAM6Q07468 PUT4YOR348C 1884 nt13.99□□□□□ -0.17
VAM6Q07468 URN1YPR152C 1398 nt13.96□□□□□ -0.18
VAM6Q07468 DEP1YAL013W 1218 nt13.92□□□□□ -0.18
VAM6Q07468 YER088W-BYER088W-B 147 nt13.86□□□□□ -0.19
VAM6Q07468 RSB1YOR049C 1065 nt13.81□□□□□ -0.2
VAM6Q07468 GAR1YHR089C 618 nt13.8□□□□□ -0.2
VAM6Q07468 OPI9YLR338W 858 nt13.78□□□□□ -0.2
VAM6Q07468 SAH1YER043C 1350 nt13.73□□□□□ -0.21
VAM6Q07468 RPN10YHR200W 807 nt13.71□□□□□ -0.21
VAM6Q07468 ARE1YCR048W 1833 nt13.71□□□□□ -0.22
VAM6Q07468 YNL208WYNL208W 600 nt13.67□□□□□ -0.22
VAM6Q07468 YHR049C-AYHR049C-A 297 nt13.53□□□□□ -0.24
VAM6Q07468 POA1YBR022W 534 nt13.53□□□□□ -0.24
VAM6Q07468 PUN1YLR414C 792 nt13.38□□□□□ -0.27
VAM6Q07468 PST2YDR032C 597 nt13.37□□□□□ -0.27
VAM6Q07468 TIR1YER011W 765 nt13.34□□□□□ -0.27
VAM6Q07468 YJR018WYJR018W 363 nt13.3□□□□□ -0.28
VAM6Q07468 BSC6YOL137W 1494 nt13.28□□□□□ -0.28
VAM6Q07468 PTC2YER089C 1395 nt13.24□□□□□ -0.29
VAM6Q07468 SSA1YAL005C 1929 nt13.21□□□□□ -0.29
VAM6Q07468 BUD23YCR047C 828 nt13.21□□□□□ -0.29
VAM6Q07468 SSA4YER103W 1929 nt13.1□□□□□ -0.31
VAM6Q07468 YJR120WYJR120W 351 nt13.1□□□□□ -0.31
VAM6Q07468 NAB2YGL122C 1578 nt13.07□□□□□ -0.32
VAM6Q07468 RPP2BYDR382W 333 nt12.99□□□□□ -0.33
VAM6Q07468 SRB2YHR041C 633 nt12.99□□□□□ -0.33
VAM6Q07468 SPT5YML010W 3192 nt12.97□□□□□ -0.33
VAM6Q07468 FIS1YIL065C 468 nt12.91□□□□□ -0.34
VAM6Q07468 PAC11YDR488C 1602 nt12.91□□□□□ -0.34
VAM6Q07468 DAL1YIR027C 1383 nt12.89□□□□□ -0.35
VAM6Q07468 SHU1YHL006C 453 nt12.87□□□□□ -0.35
VAM6Q07468 FPR4YLR449W 1179 nt12.85□□□□□ -0.35
VAM6Q07468 INM2YDR287W 879 nt12.83□□□□□ -0.36
VAM6Q07468 YKL097CYKL097C 411 nt12.78□□□□□ -0.36
VAM6Q07468 PHO4YFR034C 939 nt12.77□□□□□ -0.37
VAM6Q07468 BDF1YLR399C 2061 nt12.74□□□□□ -0.37
VAM6Q07468 WWM1YFL010C 636 nt12.74□□□□□ -0.37
VAM6Q07468 BDH2YAL061W 1254 nt12.72□□□□□ -0.37
VAM6Q07468 NVJ2YPR091C 2313 nt12.71□□□□□ -0.37
VAM6Q07468 YAL037C-BYAL037C-B 975 nt12.71□□□□□ -0.37
VAM6Q07468 YBL100CYBL100C 315 nt12.71□□□□□ -0.37
VAM6Q07468 YGR021WYGR021W 873 nt12.61□□□□□ -0.39
VAM6Q07468 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
VAM6Q07468 YPS1YLR120C 1710 nt12.56□□□□□ -0.4
VAM6Q07468 FUN26YAL022C 1554 nt12.56□□□□□ -0.4
VAM6Q07468 TAT1YBR069C 1860 nt12.54□□□□□ -0.4
VAM6Q07468 Q0182Q0182 405 nt12.53□□□□□ -0.4
VAM6Q07468 YFL021C-AYFL021C-A 855 nt12.52□□□□□ -0.41
VAM6Q07468 MNP1YGL068W 585 nt12.52□□□□□ -0.41
VAM6Q07468 LSM3YLR438C-A 270 nt12.52□□□□□ -0.41
VAM6Q07468 TRM9YML014W 840 nt12.49□□□□□ -0.41
VAM6Q07468 YDR095CYDR095C 411 nt12.47□□□□□ -0.41
VAM6Q07468 MEP2YNL142W 1500 nt12.47□□□□□ -0.41
VAM6Q07468 YHR165W-AYHR165W-A 312 nt12.43□□□□□ -0.42
VAM6Q07468 RKM5YLR137W 1104 nt12.39□□□□□ -0.43
VAM6Q07468 ALF1YNL148C 765 nt12.39□□□□□ -0.43
VAM6Q07468 CCT6YDR188W 1641 nt12.38□□□□□ -0.43
VAM6Q07468 FPS1YLL043W 2010 nt12.31□□□□□ -0.44
VAM6Q07468 YOR139CYOR139C 393 nt12.3□□□□□ -0.44
VAM6Q07468 DCW1YKL046C 1350 nt12.29□□□□□ -0.44
VAM6Q07468 SUF2tP(AGG)C 72 nt12.28□□□□□ -0.44
VAM6Q07468 SUF10tP(AGG)N 72 nt12.28□□□□□ -0.44
VAM6Q07468 YOL037CYOL037C 354 nt12.24□□□□□ -0.45
VAM6Q07468 RPP2AYOL039W 321 nt12.23□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 8.2 ms