RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeastyeast

Gene CMD1, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMD1YBR109C FAP1P53971 965 aa14.52□□□□□ -0.09
CMD1YBR109C MTC1P47018 478 aaKnown RBP14.29□□□□□ -0.12
CMD1YBR109C PRY3P47033 881 aa13.71□□□□□ -0.21
CMD1YBR109C AAD16Q02895 342 aa13□□□□□ -0.33
CMD1YBR109C YCK3P39962 524 aa12.93□□□□□ -0.34
CMD1YBR109C PRI1P10363 409 aa12.9□□□□□ -0.34
CMD1YBR109C HAA1Q12753 694 aaKnown RBP12.83□□□□□ -0.36
CMD1YBR109C ISW2Q08773 1120 aa12.17□□□□□ -0.46
CMD1YBR109C RPG1P38249 964 aaKnown RBP12.07□□□□□ -0.48
CMD1YBR109C TSR3Q12094 313 aaKnown RBP12.07□□□□□ -0.48
CMD1YBR109C DRS1P32892 752 aaKnown RBP11.77□□□□□ -0.53
CMD1YBR109C MRPL32P25348 183 aa11.63□□□□□ -0.55
CMD1YBR109C YGL015CP33199 130 aa11.59□□□□□ -0.55
CMD1YBR109C BUD31P25337 157 aaPredicted RBP11.32□□□□□ -0.6
CMD1YBR109C RSE1Q04693 1361 aaKnown RBP10.96□□□□□ -0.65
CMD1YBR109C DIP2Q12220 943 aaPredicted RBP10.88□□□□□ -0.67
CMD1YBR109C REB1P21538 810 aa10.79□□□□□ -0.68
CMD1YBR109C CDC27P38042 758 aa10.77□□□□□ -0.69
CMD1YBR109C UBP10P53874 792 aaPredicted RBP10.72□□□□□ -0.69
CMD1YBR109C RPL17AP05740 184 aaKnown RBP10.7□□□□□ -0.7
CMD1YBR109C RPL17BP46990 184 aaKnown RBP10.7□□□□□ -0.7
CMD1YBR109C MAP2P38174 421 aaKnown RBP10.61□□□□□ -0.71
CMD1YBR109C SIS1P25294 352 aaKnown RBP10.59□□□□□ -0.71
CMD1YBR109C UBP9P39967 754 aa10.4□□□□□ -0.74
CMD1YBR109C YKR023WP36119 530 aaKnown RBP10.38□□□□□ -0.75
CMD1YBR109C TIF4632P39936 914 aaKnown RBP10.27□□□□□ -0.77
CMD1YBR109C TGL3P40308 642 aa10.26□□□□□ -0.77
CMD1YBR109C TFC8Q12308 588 aa10.17□□□□□ -0.78
CMD1YBR109C SPT21P35209 758 aa10.16□□□□□ -0.78
CMD1YBR109C HOP09932 586 aa10.14□□□□□ -0.79
CMD1YBR109C DCD1P06773 312 aa10.12□□□□□ -0.79
CMD1YBR109C SLX5P32828 619 aaKnown RBP10.11□□□□□ -0.79
CMD1YBR109C SCY1P53009 804 aa10.11□□□□□ -0.79
CMD1YBR109C AVT3P36062 692 aa10.08□□□□□ -0.8
CMD1YBR109C BCH2P36122 765 aa9.77□□□□□ -0.85
CMD1YBR109C YBL029C-AQ3E756 94 aa9.7□□□□□ -0.86
CMD1YBR109C MST1P07236 462 aa9.67□□□□□ -0.86
CMD1YBR109C VNX1P42839 908 aa9.55□□□□□ -0.88
CMD1YBR109C YOR238WQ08634 303 aa9.52□□□□□ -0.89
CMD1YBR109C RIM101P33400 625 aa9.47□□□□□ -0.89
CMD1YBR109C AIR2Q12476 344 aaKnown RBP9.45□□□□□ -0.9
CMD1YBR109C SPP1Q03012 353 aa9.44□□□□□ -0.9
CMD1YBR109C BDF1P35817 686 aa9.42□□□□□ -0.9
CMD1YBR109C EPS1P40557 701 aa9.42□□□□□ -0.9
CMD1YBR109C YJL171CP46992 396 aa9.42□□□□□ -0.9
CMD1YBR109C NSR1P27476 414 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
CMD1YBR109C FKH1P40466 484 aa9.38□□□□□ -0.91
CMD1YBR109C WSC3Q12215 556 aa9.29□□□□□ -0.92
CMD1YBR109C TIF11P38912 153 aaKnown RBP9.27□□□□□ -0.93
CMD1YBR109C YAP5P40574 245 aa9.24□□□□□ -0.93
CMD1YBR109C BMT6Q12291 365 aa9.18□□□□□ -0.94
CMD1YBR109C LDB19Q12502 818 aa9.13□□□□□ -0.95
CMD1YBR109C GTT3P39996 337 aa9.08□□□□□ -0.96
CMD1YBR109C OXP1P28273 1286 aa9.07□□□□□ -0.96
CMD1YBR109C BFR2Q06631 534 aaKnown RBP9.07□□□□□ -0.96
CMD1YBR109C IOC2Q12072 812 aa9.06□□□□□ -0.96
CMD1YBR109C ULI1P43604 169 aa9.04□□□□□ -0.96
CMD1YBR109C PTP3P40048 928 aa8.99□□□□□ -0.97
CMD1YBR109C BBC1P47068 1157 aa8.99□□□□□ -0.97
CMD1YBR109C YIL055CP40523 627 aaKnown RBP8.94□□□□□ -0.98
CMD1YBR109C AI2P03876 854 aa8.87□□□□□ -0.99
CMD1YBR109C MSB4Q12317 492 aa8.86□□□□□ -0.99
CMD1YBR109C EAP1P36041 632 aaKnown RBP8.83□□□□□ -1
CMD1YBR109C RSM7P47150 247 aa8.83□□□□□ -1
CMD1YBR109C RTG1P32607 177 aa8.82□□□□□ -1
CMD1YBR109C NCR1Q12200 1170 aa8.8□□□□□ -1
CMD1YBR109C PIB1Q06651 286 aa8.76□□□□□ -1.01
CMD1YBR109C SEC61P32915 480 aa8.72□□□□□ -1.01
CMD1YBR109C TRP5P00931 707 aaKnown RBP8.71□□□□□ -1.02
CMD1YBR109C BCK2P33306 851 aa8.71□□□□□ -1.02
CMD1YBR109C YNL035CP53962 389 aaKnown RBP8.7□□□□□ -1.02
CMD1YBR109C YOL036WQ08206 761 aa8.68□□□□□ -1.02
CMD1YBR109C SET4P42948 560 aa8.65□□□□□ -1.02
CMD1YBR109C RGA2Q06407 1009 aa8.6□□□□□ -1.03
CMD1YBR109C CHL1P22516 861 aaPredicted RBP8.57□□□□□ -1.04
CMD1YBR109C TFG1P41895 735 aaPredicted RBP8.57□□□□□ -1.04
CMD1YBR109C YAH1Q12184 172 aaKnown RBP8.56□□□□□ -1.04
CMD1YBR109C SAP30P38429 201 aa8.54□□□□□ -1.04
CMD1YBR109C PRE3P38624 215 aa8.48□□□□□ -1.05
CMD1YBR109C PSD2P53037 1138 aaKnown RBP8.47□□□□□ -1.05
CMD1YBR109C YDL129WQ07555 291 aa8.47□□□□□ -1.05
CMD1YBR109C MRM1P25270 412 aa8.46□□□□□ -1.06
CMD1YBR109C DAN4P47179 1161 aa8.46□□□□□ -1.06
CMD1YBR109C JIP4Q03361 876 aa8.44□□□□□ -1.06
CMD1YBR109C SAM3Q08986 587 aa8.44□□□□□ -1.06
CMD1YBR109C XDJ1P39102 459 aa8.42□□□□□ -1.06
CMD1YBR109C VMA1P17255 1071 aaKnown RBP8.41□□□□□ -1.06
CMD1YBR109C YMR1P47147 688 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06 RIP-Chip
CMD1YBR109C DBP1P24784 617 aaKnown RBP8.39□□□□□ -1.07
CMD1YBR109C YLR271WQ06152 274 aa8.39□□□□□ -1.07
CMD1YBR109C TFA1P36100 482 aa8.35□□□□□ -1.07
CMD1YBR109C ABP1P15891 592 aaKnown RBP8.33□□□□□ -1.08
CMD1YBR109C VRP1P37370 817 aa8.33□□□□□ -1.08
CMD1YBR109C VPS29P38759 282 aa8.32□□□□□ -1.08
CMD1YBR109C DPS1P04802 557 aaKnown RBP8.31□□□□□ -1.08
CMD1YBR109C YFR006WP43590 535 aa8.31□□□□□ -1.08
CMD1YBR109C RGA1P39083 1007 aa8.29□□□□□ -1.08
CMD1YBR109C STS1P38637 319 aa8.27□□□□□ -1.09
CMD1YBR109C HTA1P04911 132 aaKnown RBP8.24□□□□□ -1.09
CMD1YBR109C HTA2P04912 132 aa8.24□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms