Protein–RNA interactions for Protein: P39994

YEL020C, Putative 2-hydroxyacyl-CoA lyase, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEL020CP39994 NSR1YGR159C 1245 nt19.12■□□□□ 0.65
YEL020CP39994 YML009W-BYML009W-B 477 nt19.02■□□□□ 0.64
YEL020CP39994 NOP1YDL014W 984 nt18.3■□□□□ 0.52
YEL020CP39994 MDJ1YFL016C 1536 nt17.33■□□□□ 0.37
YEL020CP39994 YKL036CYKL036C 393 nt16.91■□□□□ 0.3
YEL020CP39994 SRX1YKL086W 384 nt16.04■□□□□ 0.16
YEL020CP39994 Q0297Q0297 156 nt15.98■□□□□ 0.15
YEL020CP39994 YJL027CYJL027C 417 nt15.9■□□□□ 0.14
YEL020CP39994 SCS3YGL126W 1143 nt15.46■□□□□ 0.07
YEL020CP39994 DBP2YNL112W 1641 nt15.24■□□□□ 0.03
YEL020CP39994 YCR051WYCR051W 669 nt15.19■□□□□ 0.02
YEL020CP39994 YBR190WYBR190W 312 nt14.79□□□□□ -0.04
YEL020CP39994 TRN1tP(UGG)A 72 nt14.71□□□□□ -0.05
YEL020CP39994 SUF9tP(UGG)F 72 nt14.71□□□□□ -0.05
YEL020CP39994 SUF8tP(UGG)H 72 nt14.71□□□□□ -0.05
YEL020CP39994 tP(UGG)LtP(UGG)L 72 nt14.71□□□□□ -0.05
YEL020CP39994 SUF7tP(UGG)M 72 nt14.71□□□□□ -0.05
YEL020CP39994 tP(UGG)N1tP(UGG)N1 72 nt14.71□□□□□ -0.05
YEL020CP39994 tP(UGG)N2tP(UGG)N2 72 nt14.71□□□□□ -0.05
YEL020CP39994 tP(UGG)O1tP(UGG)O1 72 nt14.71□□□□□ -0.05
YEL020CP39994 SUF11tP(UGG)O2 72 nt14.71□□□□□ -0.05
YEL020CP39994 YOL085CYOL085C 342 nt14.59□□□□□ -0.07
YEL020CP39994 CCC1YLR220W 969 nt14.54□□□□□ -0.08
YEL020CP39994 RTC3YHR087W 336 nt14.44□□□□□ -0.1
YEL020CP39994 RPP1BYDL130W 321 nt14.33□□□□□ -0.12
YEL020CP39994 PKP1YIL042C 1185 nt14.32□□□□□ -0.12
YEL020CP39994 SCJ1YMR214W 1134 nt14.21□□□□□ -0.13
YEL020CP39994 SSA3YBL075C 1950 nt14.19□□□□□ -0.14
YEL020CP39994 RVS167YDR388W 1449 nt14.14□□□□□ -0.15
YEL020CP39994 ATS1YAL020C 1002 nt13.95□□□□□ -0.18
YEL020CP39994 tP(UGG)O3tP(UGG)O3 72 nt13.8□□□□□ -0.2
YEL020CP39994 PET122YER153C 765 nt13.78□□□□□ -0.2
YEL020CP39994 PUT4YOR348C 1884 nt13.71□□□□□ -0.21
YEL020CP39994 SHR5YOL110W 714 nt13.62□□□□□ -0.23
YEL020CP39994 SCR1SCR1 522 nt13.58□□□□□ -0.24
YEL020CP39994 URN1YPR152C 1398 nt13.44□□□□□ -0.26
YEL020CP39994 DEP1YAL013W 1218 nt13.38□□□□□ -0.27
YEL020CP39994 ARE1YCR048W 1833 nt13.38□□□□□ -0.27
YEL020CP39994 YDJ1YNL064C 1230 nt13.34□□□□□ -0.27
YEL020CP39994 RRN5YLR141W 1092 nt13.33□□□□□ -0.28
YEL020CP39994 SAH1YER043C 1350 nt13.32□□□□□ -0.28
YEL020CP39994 OPI9YLR338W 858 nt13.3□□□□□ -0.28
YEL020CP39994 POA1YBR022W 534 nt13.24□□□□□ -0.29
YEL020CP39994 YHR049C-AYHR049C-A 297 nt13.2□□□□□ -0.3
YEL020CP39994 GAR1YHR089C 618 nt13.11□□□□□ -0.31
YEL020CP39994 RPN10YHR200W 807 nt13.09□□□□□ -0.31
YEL020CP39994 YNL208WYNL208W 600 nt13.08□□□□□ -0.32
YEL020CP39994 YER088W-BYER088W-B 147 nt13.07□□□□□ -0.32
YEL020CP39994 BSC6YOL137W 1494 nt13.03□□□□□ -0.32
YEL020CP39994 RSB1YOR049C 1065 nt13.02□□□□□ -0.33
YEL020CP39994 PUN1YLR414C 792 nt12.88□□□□□ -0.35
YEL020CP39994 PST2YDR032C 597 nt12.85□□□□□ -0.35
YEL020CP39994 BUD23YCR047C 828 nt12.84□□□□□ -0.35
YEL020CP39994 SPT5YML010W 3192 nt12.84□□□□□ -0.35
YEL020CP39994 PTC2YER089C 1395 nt12.81□□□□□ -0.36
YEL020CP39994 YJR018WYJR018W 363 nt12.79□□□□□ -0.36
YEL020CP39994 TIR1YER011W 765 nt12.67□□□□□ -0.38
YEL020CP39994 SSA4YER103W 1929 nt12.66□□□□□ -0.38
YEL020CP39994 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
YEL020CP39994 YJR120WYJR120W 351 nt12.63□□□□□ -0.39
YEL020CP39994 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
YEL020CP39994 YKL097CYKL097C 411 nt12.55□□□□□ -0.4
YEL020CP39994 FIS1YIL065C 468 nt12.52□□□□□ -0.41
YEL020CP39994 SRB2YHR041C 633 nt12.45□□□□□ -0.42
YEL020CP39994 DAL1YIR027C 1383 nt12.44□□□□□ -0.42
YEL020CP39994 FPR4YLR449W 1179 nt12.41□□□□□ -0.42
YEL020CP39994 RPP2BYDR382W 333 nt12.4□□□□□ -0.42
YEL020CP39994 PHO4YFR034C 939 nt12.35□□□□□ -0.43
YEL020CP39994 INM2YDR287W 879 nt12.33□□□□□ -0.44
YEL020CP39994 BDF1YLR399C 2061 nt12.24□□□□□ -0.45
YEL020CP39994 MEP2YNL142W 1500 nt12.24□□□□□ -0.45
YEL020CP39994 SHU1YHL006C 453 nt12.22□□□□□ -0.45
YEL020CP39994 YPS1YLR120C 1710 nt12.21□□□□□ -0.45
YEL020CP39994 YBL100CYBL100C 315 nt12.21□□□□□ -0.45
YEL020CP39994 BDH2YAL061W 1254 nt12.15□□□□□ -0.46
YEL020CP39994 YDR095CYDR095C 411 nt12.1□□□□□ -0.47
YEL020CP39994 WWM1YFL010C 636 nt12.1□□□□□ -0.47
YEL020CP39994 DCW1YKL046C 1350 nt12.09□□□□□ -0.47
YEL020CP39994 YHR165W-AYHR165W-A 312 nt12.07□□□□□ -0.48
YEL020CP39994 FUN26YAL022C 1554 nt12.06□□□□□ -0.48
YEL020CP39994 TAT1YBR069C 1860 nt12.04□□□□□ -0.48
YEL020CP39994 YAL037C-BYAL037C-B 975 nt11.94□□□□□ -0.5
YEL020CP39994 TRM9YML014W 840 nt11.94□□□□□ -0.5
YEL020CP39994 LSM3YLR438C-A 270 nt11.91□□□□□ -0.5
YEL020CP39994 ALF1YNL148C 765 nt11.91□□□□□ -0.5
YEL020CP39994 PTP1YDL230W 1008 nt11.9□□□□□ -0.5
YEL020CP39994 EMI2YDR516C 1503 nt11.88□□□□□ -0.51
YEL020CP39994 HOM6YJR139C 1080 nt11.88□□□□□ -0.51
YEL020CP39994 YOR139CYOR139C 393 nt11.88□□□□□ -0.51
YEL020CP39994 CCT6YDR188W 1641 nt11.87□□□□□ -0.51
YEL020CP39994 YGR021WYGR021W 873 nt11.87□□□□□ -0.51
YEL020CP39994 YFL021C-AYFL021C-A 855 nt11.86□□□□□ -0.51
YEL020CP39994 CAC2YML102W 1407 nt11.86□□□□□ -0.51
YEL020CP39994 NPL3YDR432W 1245 nt11.85□□□□□ -0.51
YEL020CP39994 YBR220CYBR220C 1683 nt11.84□□□□□ -0.51
YEL020CP39994 RPP2AYOL039W 321 nt11.84□□□□□ -0.51
YEL020CP39994 MNP1YGL068W 585 nt11.81□□□□□ -0.52
YEL020CP39994 YDL221WYDL221W 552 nt11.78□□□□□ -0.52
YEL020CP39994 SIS1YNL007C 1059 nt11.78□□□□□ -0.52
YEL020CP39994 YMR090WYMR090W 684 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms