RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Camk2n2Q78WH7 79 aa10.91□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Prr15lQ8JZM2 100 aa10.91□□□□□ -0.66
Col5a1-201ENSMUST00000028280 CrygcQ61597 174 aa10.91□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Erdr1J3QMM0 206 aa10.91□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Gm17577J3QNF7 156 aa10.91□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Gm10735Q3US96 136 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Kiaa1549Q68FD9 1940 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Trav13n-2A0A0G2JF93 110 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Psmb8P28063 276 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Rnf144bQ8BKD6 301 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv1-19A0A0A6YWX0 117 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Trav12d-3A0A075B6A4 115 aa10.9□□□□□ -0.66
Col5a1-201ENSMUST00000028280 Ighv5-8A0A075B676 92 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Gata3P23772 443 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Fam110aQ8R184 296 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 OdaphJ3QNT8 126 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Cfap126Q6P8X9 189 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Zc2hc1aQ8BJH1 324 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Tfpi2O35536 230 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 CenpwQ3URR0 86 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Ighv3-6P18531 116 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Wfdc10Q3V2J9 124 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Zmat4Q8BZ94 229 aa10.89□□□□□ -0.67
Col5a1-201ENSMUST00000028280 1700010B08RikQ9DAI7 102 aa10.88□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Ighv1-77A0A0G2JGS9 117 aa10.88□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav13n-1A0A0G2JEU8 110 aa10.88□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Rpl39lQ9CQD0 51 aa10.88□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Abca2P41234 2434 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Rpl39P62892 51 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Pkd1l2Q7TN88 2461 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav13d-4A0A0G2JFX3 110 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 7420426K07RikQ3UX66 186 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Q99M08 65 aa10.87□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Mlst8Q9DCJ1 326 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Rnf152Q8BG47 203 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 H2al1kJ3QP08 105 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Vopp1Q8R1C3 172 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav13-2A0A075B649 110 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 1500011B03RikQ3TTH7 73 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Odf1Q61999 247 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Gm17521F6QAC8 156 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Ighv3-1A0A075B5S6 116 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trbv13-1A0A0B4J1P8 112 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Fstl3Q9EQC7 256 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Defb13Q8R2I4 64 aa10.86□□□□□ -0.67
Col5a1-201ENSMUST00000028280 4933414I15RikQ9D4D5 133 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Ebi3O35228 228 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Gm12253Q5NC48 229 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav9n-2A0A0G2JDP3 113 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Tnfrsf13bQ9ET35 249 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav13d-1A0A075B606 110 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Obox8V9GWY9 217 aa10.85□□□□□ -0.67
Col5a1-201ENSMUST00000028280 LoxP28301 411 aa10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Igkv8-21A0A140T8P7 120 aa10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Atox1O08997 68 aaKnown RBP10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 P84750 121 aa10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav9-2A0A075B647 113 aa10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Trav9-4A0A0B4J1K2 113 aa10.84□□□□□ -0.67
Col5a1-201ENSMUST00000028280 Gm42674D3YUT9 64 aa10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Loxl1P97873 607 aa10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P01745 121 aa10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Rnf138Q9CQE0 245 aaKnown RBP10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Znf672Q99LH4 468 aa10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm12689Q8BQU9 117 aa10.83□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm9970F6ZED4 185 aa10.82□□□□□ -0.68
Col5a1-201ENSMUST00000028280 3110082J24RikF6Z6Z2 108 aa10.82□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Trav13-1A0A075B644 110 aa10.82□□□□□ -0.68
Col5a1-201ENSMUST00000028280 EnhoQ8K1D8 76 aa10.82□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Ccdc179J3QM76 67 aa10.82□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm10337F7DEP7 55 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Tmem223Q9CQE2 199 aaKnown RBP10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Lypd6Q8BPP5 171 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 NpyP57774 97 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Cfc1P97766 202 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm37988J3QM41 62 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P01753 117 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Ighv1-52A0A0A6YXC3 117 aa10.81□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Reg3bP35230 175 aa10.8□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Igkv1-117A0A140T8M0 119 aa10.8□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P01630 113 aa10.8□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P01750 117 aa10.8□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Ighv1-12A0A0A6YXJ9 117 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm10401E9Q3K6 71 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 B230359F08RikA0A0B4J1K3 109 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Wisp3D3Z5L9 354 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Trav13-4-dv7A0A075B6C2 110 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Hoxb4P10284 250 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Fancd2osQ9D4K4 178 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 4930470P17RikQ9D542 155 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Cox7bP56393 80 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Q08AU9 97 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Ccl24Q9JKC0 119 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Igf2rQ07113 2483 aaKnown RBP10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Tm2d1Q99MB3 208 aa10.79□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P06320 134 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Timm17bQ9Z0V7 172 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P04940 107 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 P04941 107 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Fam19a4Q7TPG5 135 aa10.78□□□□□ -0.68
Col5a1-201ENSMUST00000028280 Gm6034E9Q101 117 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 124.7 ms