Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2al1kJ3QP08 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2al1kJ3QP08 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
H2al1kJ3QP08 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
H2al1kJ3QP08 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2al1kJ3QP08 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2al1kJ3QP08 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2al1kJ3QP08 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2al1kJ3QP08 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2al1kJ3QP08 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2al1kJ3QP08 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
H2al1kJ3QP08 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2al1kJ3QP08 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2al1kJ3QP08 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2al1kJ3QP08 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2al1kJ3QP08 Psd-208ENSMUST00000224556 2034 ntBASIC17.67■□□□□ 0.42
H2al1kJ3QP08 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2al1kJ3QP08 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2al1kJ3QP08 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.56■□□□□ 0.4
H2al1kJ3QP08 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2al1kJ3QP08 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2al1kJ3QP08 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2al1kJ3QP08 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2al1kJ3QP08 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H2al1kJ3QP08 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H2al1kJ3QP08 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2al1kJ3QP08 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H2al1kJ3QP08 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.28■□□□□ 0.36
H2al1kJ3QP08 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2al1kJ3QP08 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.25■□□□□ 0.35
H2al1kJ3QP08 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2al1kJ3QP08 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
H2al1kJ3QP08 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2al1kJ3QP08 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2al1kJ3QP08 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2al1kJ3QP08 Zxda-201ENSMUST00000117281 2621 ntBASIC16.96■□□□□ 0.3
H2al1kJ3QP08 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2al1kJ3QP08 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2al1kJ3QP08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2al1kJ3QP08 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.81■□□□□ 0.28
H2al1kJ3QP08 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2al1kJ3QP08 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
H2al1kJ3QP08 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2al1kJ3QP08 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2al1kJ3QP08 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2al1kJ3QP08 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.62■□□□□ 0.25
H2al1kJ3QP08 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2al1kJ3QP08 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2al1kJ3QP08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H2al1kJ3QP08 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2al1kJ3QP08 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2al1kJ3QP08 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2al1kJ3QP08 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2al1kJ3QP08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2al1kJ3QP08 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2al1kJ3QP08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2al1kJ3QP08 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H2al1kJ3QP08 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2al1kJ3QP08 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2al1kJ3QP08 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2al1kJ3QP08 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2al1kJ3QP08 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
H2al1kJ3QP08 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2al1kJ3QP08 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2al1kJ3QP08 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2al1kJ3QP08 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2al1kJ3QP08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2al1kJ3QP08 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2al1kJ3QP08 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2al1kJ3QP08 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
H2al1kJ3QP08 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2al1kJ3QP08 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2al1kJ3QP08 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2al1kJ3QP08 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2al1kJ3QP08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2al1kJ3QP08 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
H2al1kJ3QP08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
H2al1kJ3QP08 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2al1kJ3QP08 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2al1kJ3QP08 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2al1kJ3QP08 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
H2al1kJ3QP08 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2al1kJ3QP08 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2al1kJ3QP08 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
H2al1kJ3QP08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2al1kJ3QP08 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2al1kJ3QP08 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2al1kJ3QP08 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2al1kJ3QP08 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2al1kJ3QP08 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms