Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Igkv1-117A0A140T8M0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Igkv1-117A0A140T8M0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Igkv1-117A0A140T8M0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv1-117A0A140T8M0 Psd-208ENSMUST00000224556 2034 ntBASIC21.49■■□□□ 1.03
Igkv1-117A0A140T8M0 Gm25239-201ENSMUST00000174915 86 ntBASIC21.32■■□□□ 1
Igkv1-117A0A140T8M0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv1-117A0A140T8M0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv1-117A0A140T8M0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv1-117A0A140T8M0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Igkv1-117A0A140T8M0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Igkv1-117A0A140T8M0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Igkv1-117A0A140T8M0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igkv1-117A0A140T8M0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv1-117A0A140T8M0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv1-117A0A140T8M0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv1-117A0A140T8M0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Igkv1-117A0A140T8M0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Igkv1-117A0A140T8M0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.88■□□□□ 0.77
Igkv1-117A0A140T8M0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv1-117A0A140T8M0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Igkv1-117A0A140T8M0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Igkv1-117A0A140T8M0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Igkv1-117A0A140T8M0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Igkv1-117A0A140T8M0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Igkv1-117A0A140T8M0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.5■□□□□ 0.71
Igkv1-117A0A140T8M0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Gm15042-201ENSMUST00000120212 883 ntBASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv1-117A0A140T8M0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv1-117A0A140T8M0 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.39■□□□□ 0.69
Igkv1-117A0A140T8M0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv1-117A0A140T8M0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv1-117A0A140T8M0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv1-117A0A140T8M0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv1-117A0A140T8M0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv1-117A0A140T8M0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv1-117A0A140T8M0 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.2■□□□□ 0.66
Igkv1-117A0A140T8M0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.19■□□□□ 0.66
Igkv1-117A0A140T8M0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv1-117A0A140T8M0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.17■□□□□ 0.66
Igkv1-117A0A140T8M0 Gm15045-201ENSMUST00000117359 883 ntBASIC19.15■□□□□ 0.66
Igkv1-117A0A140T8M0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv1-117A0A140T8M0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Igkv1-117A0A140T8M0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Igkv1-117A0A140T8M0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Igkv1-117A0A140T8M0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Igkv1-117A0A140T8M0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Igkv1-117A0A140T8M0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Igkv1-117A0A140T8M0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Igkv1-117A0A140T8M0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv1-117A0A140T8M0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv1-117A0A140T8M0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.85■□□□□ 0.61
Igkv1-117A0A140T8M0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv1-117A0A140T8M0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv1-117A0A140T8M0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Igkv1-117A0A140T8M0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Igkv1-117A0A140T8M0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Igkv1-117A0A140T8M0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Igkv1-117A0A140T8M0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Igkv1-117A0A140T8M0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Igkv1-117A0A140T8M0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Igkv1-117A0A140T8M0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv1-117A0A140T8M0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Igkv1-117A0A140T8M0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Igkv1-117A0A140T8M0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Igkv1-117A0A140T8M0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Igkv1-117A0A140T8M0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igkv1-117A0A140T8M0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv1-117A0A140T8M0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.52■□□□□ 0.56
Igkv1-117A0A140T8M0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Igkv1-117A0A140T8M0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igkv1-117A0A140T8M0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv1-117A0A140T8M0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Igkv1-117A0A140T8M0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv1-117A0A140T8M0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Igkv1-117A0A140T8M0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv1-117A0A140T8M0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.34■□□□□ 0.53
Igkv1-117A0A140T8M0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-117A0A140T8M0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv1-117A0A140T8M0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv1-117A0A140T8M0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Igkv1-117A0A140T8M0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Igkv1-117A0A140T8M0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv1-117A0A140T8M0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Igkv1-117A0A140T8M0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv1-117A0A140T8M0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-117A0A140T8M0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv1-117A0A140T8M0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.17■□□□□ 0.5
Igkv1-117A0A140T8M0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Igkv1-117A0A140T8M0 Gm24109-201ENSMUST00000175489 103 ntBASIC18.15■□□□□ 0.5
Igkv1-117A0A140T8M0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Igkv1-117A0A140T8M0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Igkv1-117A0A140T8M0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv1-117A0A140T8M0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv1-117A0A140T8M0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv1-117A0A140T8M0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv1-117A0A140T8M0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms