Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Igkv1-117A0A140T8M0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC21,97■■□□□ 1,11
Igkv1-117A0A140T8M0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21,86■■□□□ 1,09
Igkv1-117A0A140T8M0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
Igkv1-117A0A140T8M0 Psd-208ENSMUST00000224556 2034 ntBASIC21,49■■□□□ 1,03
Igkv1-117A0A140T8M0 Gm25239-201ENSMUST00000174915 86 ntBASIC21,32■■□□□ 1
Igkv1-117A0A140T8M0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Igkv1-117A0A140T8M0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Igkv1-117A0A140T8M0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20,65■□□□□ 0,9
Igkv1-117A0A140T8M0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Igkv1-117A0A140T8M0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20,41■□□□□ 0,86
Igkv1-117A0A140T8M0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20,39■□□□□ 0,86
Igkv1-117A0A140T8M0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,3■□□□□ 0,84
Igkv1-117A0A140T8M0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20,26■□□□□ 0,83
Igkv1-117A0A140T8M0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,22■□□□□ 0,83
Igkv1-117A0A140T8M0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Igkv1-117A0A140T8M0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20,07■□□□□ 0,8
Igkv1-117A0A140T8M0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC19,95■□□□□ 0,78
Igkv1-117A0A140T8M0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19,88■□□□□ 0,77
Igkv1-117A0A140T8M0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19,75■□□□□ 0,75
Igkv1-117A0A140T8M0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19,75■□□□□ 0,75
Igkv1-117A0A140T8M0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Igkv1-117A0A140T8M0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Igkv1-117A0A140T8M0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Igkv1-117A0A140T8M0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Igkv1-117A0A140T8M0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19,5■□□□□ 0,71
Igkv1-117A0A140T8M0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,43■□□□□ 0,7
Igkv1-117A0A140T8M0 Gm15042-201ENSMUST00000120212 883 ntBASIC19,43■□□□□ 0,7
Igkv1-117A0A140T8M0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19,43■□□□□ 0,7
Igkv1-117A0A140T8M0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19,39■□□□□ 0,69
Igkv1-117A0A140T8M0 Gm42596-201ENSMUST00000196305 1958 ntBASIC19,39■□□□□ 0,69
Igkv1-117A0A140T8M0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19,34■□□□□ 0,69
Igkv1-117A0A140T8M0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Igkv1-117A0A140T8M0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,28■□□□□ 0,68
Igkv1-117A0A140T8M0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19,27■□□□□ 0,67
Igkv1-117A0A140T8M0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19,26■□□□□ 0,67
Igkv1-117A0A140T8M0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19,25■□□□□ 0,67
Igkv1-117A0A140T8M0 Gm10524-201ENSMUST00000181931 1893 ntBASIC19,2■□□□□ 0,66
Igkv1-117A0A140T8M0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19,19■□□□□ 0,66
Igkv1-117A0A140T8M0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv1-117A0A140T8M0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19,17■□□□□ 0,66
Igkv1-117A0A140T8M0 Gm15045-201ENSMUST00000117359 883 ntBASIC19,15■□□□□ 0,66
Igkv1-117A0A140T8M0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19,14■□□□□ 0,65
Igkv1-117A0A140T8M0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,12■□□□□ 0,65
Igkv1-117A0A140T8M0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19,11■□□□□ 0,65
Igkv1-117A0A140T8M0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19,1■□□□□ 0,65
Igkv1-117A0A140T8M0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19,05■□□□□ 0,64
Igkv1-117A0A140T8M0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19,03■□□□□ 0,64
Igkv1-117A0A140T8M0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19,01■□□□□ 0,63
Igkv1-117A0A140T8M0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18,99■□□□□ 0,63
Igkv1-117A0A140T8M0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC18,91■□□□□ 0,62
Igkv1-117A0A140T8M0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18,87■□□□□ 0,61
Igkv1-117A0A140T8M0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18,85■□□□□ 0,61
Igkv1-117A0A140T8M0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Igkv1-117A0A140T8M0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Igkv1-117A0A140T8M0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv1-117A0A140T8M0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18,74■□□□□ 0,59
Igkv1-117A0A140T8M0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18,72■□□□□ 0,59
Igkv1-117A0A140T8M0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18,67■□□□□ 0,58
Igkv1-117A0A140T8M0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18,65■□□□□ 0,58
Igkv1-117A0A140T8M0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18,63■□□□□ 0,57
Igkv1-117A0A140T8M0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18,63■□□□□ 0,57
Igkv1-117A0A140T8M0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Igkv1-117A0A140T8M0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18,62■□□□□ 0,57
Igkv1-117A0A140T8M0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Igkv1-117A0A140T8M0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18,59■□□□□ 0,57
Igkv1-117A0A140T8M0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18,58■□□□□ 0,57
Igkv1-117A0A140T8M0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18,55■□□□□ 0,56
Igkv1-117A0A140T8M0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Igkv1-117A0A140T8M0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18,52■□□□□ 0,56
Igkv1-117A0A140T8M0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,55
Igkv1-117A0A140T8M0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18,48■□□□□ 0,55
Igkv1-117A0A140T8M0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18,44■□□□□ 0,54
Igkv1-117A0A140T8M0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18,42■□□□□ 0,54
Igkv1-117A0A140T8M0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18,4■□□□□ 0,54
Igkv1-117A0A140T8M0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18,39■□□□□ 0,54
Igkv1-117A0A140T8M0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18,36■□□□□ 0,53
Igkv1-117A0A140T8M0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18,34■□□□□ 0,53
Igkv1-117A0A140T8M0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Igkv1-117A0A140T8M0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18,3■□□□□ 0,52
Igkv1-117A0A140T8M0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18,28■□□□□ 0,52
Igkv1-117A0A140T8M0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18,26■□□□□ 0,51
Igkv1-117A0A140T8M0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18,24■□□□□ 0,51
Igkv1-117A0A140T8M0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18,21■□□□□ 0,51
Igkv1-117A0A140T8M0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,21■□□□□ 0,5
Igkv1-117A0A140T8M0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18,2■□□□□ 0,5
Igkv1-117A0A140T8M0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Igkv1-117A0A140T8M0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Igkv1-117A0A140T8M0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv1-117A0A140T8M0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv1-117A0A140T8M0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18,17■□□□□ 0,5
Igkv1-117A0A140T8M0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18,16■□□□□ 0,5
Igkv1-117A0A140T8M0 Gm24109-201ENSMUST00000175489 103 ntBASIC18,15■□□□□ 0,5
Igkv1-117A0A140T8M0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18,14■□□□□ 0,49
Igkv1-117A0A140T8M0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18,13■□□□□ 0,49
Igkv1-117A0A140T8M0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,12■□□□□ 0,49
Igkv1-117A0A140T8M0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18,11■□□□□ 0,49
Igkv1-117A0A140T8M0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18,04■□□□□ 0,48
Igkv1-117A0A140T8M0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC18,04■□□□□ 0,48
Igkv1-117A0A140T8M0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18,03■□□□□ 0,48
Retrieved 100 of 76,532 protein–RNA pairs in 9,7 ms