Protein–RNA interactions for Protein: E9Q3K6

Gm10401, Predicted gene 10401, mousemouse

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10401E9Q3K6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm10401E9Q3K6 Gm25239-201ENSMUST00000174915 86 ntBASIC20.65■□□□□ 0.9
Gm10401E9Q3K6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Gm10401E9Q3K6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm10401E9Q3K6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm10401E9Q3K6 Psd-208ENSMUST00000224556 2034 ntBASIC19.93■□□□□ 0.78
Gm10401E9Q3K6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm10401E9Q3K6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm10401E9Q3K6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Gm10401E9Q3K6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm10401E9Q3K6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm10401E9Q3K6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gm10401E9Q3K6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm10401E9Q3K6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Gm10401E9Q3K6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm10401E9Q3K6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Gm10401E9Q3K6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.81■□□□□ 0.6
Gm10401E9Q3K6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm10401E9Q3K6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm10401E9Q3K6 Gm15042-201ENSMUST00000120212 883 ntBASIC18.74■□□□□ 0.59
Gm10401E9Q3K6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm10401E9Q3K6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm10401E9Q3K6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm10401E9Q3K6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10401E9Q3K6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10401E9Q3K6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10401E9Q3K6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10401E9Q3K6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gm10401E9Q3K6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm10401E9Q3K6 Gm15045-201ENSMUST00000117359 883 ntBASIC18.37■□□□□ 0.53
Gm10401E9Q3K6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm10401E9Q3K6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm10401E9Q3K6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm10401E9Q3K6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm10401E9Q3K6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm10401E9Q3K6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.19■□□□□ 0.5
Gm10401E9Q3K6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm10401E9Q3K6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm10401E9Q3K6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.18■□□□□ 0.5
Gm10401E9Q3K6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm10401E9Q3K6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10401E9Q3K6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10401E9Q3K6 Gm10524-201ENSMUST00000181931 1893 ntBASIC18.09■□□□□ 0.49
Gm10401E9Q3K6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10401E9Q3K6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10401E9Q3K6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10401E9Q3K6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10401E9Q3K6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10401E9Q3K6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10401E9Q3K6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm10401E9Q3K6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm10401E9Q3K6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm10401E9Q3K6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm10401E9Q3K6 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.87■□□□□ 0.45
Gm10401E9Q3K6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10401E9Q3K6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Gm10401E9Q3K6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm10401E9Q3K6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm10401E9Q3K6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm10401E9Q3K6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm10401E9Q3K6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm10401E9Q3K6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm10401E9Q3K6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm10401E9Q3K6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm10401E9Q3K6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm10401E9Q3K6 Gm24109-201ENSMUST00000175489 103 ntBASIC17.52■□□□□ 0.4
Gm10401E9Q3K6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.49■□□□□ 0.39
Gm10401E9Q3K6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm10401E9Q3K6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm10401E9Q3K6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm10401E9Q3K6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Gm10401E9Q3K6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm10401E9Q3K6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm10401E9Q3K6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm10401E9Q3K6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gm10401E9Q3K6 Gm23366-201ENSMUST00000175022 89 ntBASIC17.4■□□□□ 0.38
Gm10401E9Q3K6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm10401E9Q3K6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm10401E9Q3K6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10401E9Q3K6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10401E9Q3K6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm10401E9Q3K6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm10401E9Q3K6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm10401E9Q3K6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm10401E9Q3K6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm10401E9Q3K6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm10401E9Q3K6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Gm10401E9Q3K6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm10401E9Q3K6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm10401E9Q3K6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm10401E9Q3K6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gm10401E9Q3K6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10401E9Q3K6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17.24■□□□□ 0.35
Gm10401E9Q3K6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm10401E9Q3K6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10401E9Q3K6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm10401E9Q3K6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm10401E9Q3K6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm10401E9Q3K6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm10401E9Q3K6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms