RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Trav13d-1A0A075B606 110 aa11.73□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Znrf2Q71FD5 238 aa11.73□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Tnfrsf13bQ9ET35 249 aa11.73□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Col8a2P25318 699 aa11.73□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 SbsponQ3UPR9 264 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Trav4n-4A0A075B615 110 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 P04945 108 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Runx1Q03347 451 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Gm17472A0A075B683 117 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Cox11Q6P8I6 275 aa11.72□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 P04942 107 aa11.71□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 AvpP35455 168 aa11.71□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Gm9949Q8C9F4 104 aa11.71□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 4930470P17RikQ9D542 155 aa11.71□□□□□ -0.53
Ccdc50-203ENSMUST00000100026 Ighv8-8A0A0A6YXQ0 119 aa11.71□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gp9O88186 177 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 1500011B03RikQ3TTH7 73 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 H2al1nQ497L1 109 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Ighv8-2A0A0A6YW58 119 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm17577J3QNF7 156 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Igll1P20764 209 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Trav13-2A0A075B649 110 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Znf664Q4VA44 261 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Igkv3-4A0A140T8Q4 119 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Prop1P97458 223 aa11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Anapc1P53995 1944 aaKnown RBP11.7□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Tomm6Q9CQN3 74 aa11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Sptan1P16546 2472 aaKnown RBP11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 MyofQ69ZN7 2048 aaKnown RBP11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 LitafQ9JLJ0 161 aa11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm9925F6T2U3 160 aa11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Klk5Q9D140 293 aa11.69□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Ociad2Q9D8W7 154 aa11.68□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm11733Q8BQP1 125 aa11.68□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 E030018B13RikJ3QMS9 113 aa11.68□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Lst1O08843 95 aa11.68□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Ube2v1Q9CZY3 147 aa11.68□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm9936Q8C864 160 aa11.67□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Trav9n-4A0A075B631 113 aa11.67□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Sh2d1aO88890 126 aa11.67□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gata1P17679 413 aa11.66□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Ly6c2P0CW03 131 aa11.66□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Tmem223Q9CQE2 199 aaKnown RBP11.66□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Trav13-4-dv7A0A075B6C2 110 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Igkv3-3A0A140T8Q0 119 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Dkk4Q8VEJ3 221 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 CadB2RQC6 2225 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 GhrhP16043 103 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm14137Q8CE97 175 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Abca4O35600 2310 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Usf3B2RUQ2 2221 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Gm20708H3BKF4 155 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Lhfpl1Q80SV1 220 aa11.65□□□□□ -0.54
Ccdc50-203ENSMUST00000100026 Trav13n-1A0A0G2JEU8 110 aa11.65□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 P84751 237 aa11.64□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Fam19a1Q7TPG8 133 aa11.64□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Tet1Q3URK3 2007 aaKnown RBP11.64□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Zic4Q61467 341 aa11.64□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Mtatp8P03930 67 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Tal2Q62282 108 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Q8C708 225 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Cd300eQ8K249 196 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 B230359F08RikA0A0B4J1K3 109 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Zfand3Q497H0 227 aa11.63□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 9930022D16RikQ8BG27 128 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 P01820 115 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 A230072I06RikQ3UUJ8 172 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Heatr5aQ5PRF0 2038 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Rpl39P62892 51 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Col24a1Q30D77 1733 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Gphb5Q812B2 130 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Fam241bQ9D882 120 aa11.62□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Ighv1-11A0A0A6YWI9 117 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Igkv8-21A0A140T8P7 120 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Spink10Q8CAC8 162 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Trav13-1A0A075B644 110 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Gm37389A0A0A6YW05 95 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Lmo4P61969 165 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 P04943 107 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Arhgap21Q6DFV3 1944 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Col5a3Q9JLI2 1739 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 MgamB5THE2 1827 aa11.61□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Sigmar1O55242 223 aa11.6□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Klk12B2RVZ0 247 aa11.6□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Sprr3O09116 238 aa11.6□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Fgf6P21658 208 aa11.6□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Defb47Q30KN1 79 aa11.6□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Egr2P08152 470 aa11.59□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Fam19a4Q7TPG5 135 aa11.59□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Ccdc179J3QM76 67 aa11.59□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 P01674 108 aa11.59□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Wisp3D3Z5L9 354 aa11.59□□□□□ -0.55
Ccdc50-203ENSMUST00000100026 Glrp1E9Q9S8 174 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Gm8251F6VUT6 1994 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 9430069I07RikQ9CX21 111 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 CrygdP04342 174 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 FancmQ8BGE5 2021 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Foxi2Q3I5G5 311 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 9530003J23RikQ8BM26 151 aa11.58□□□□□ -0.56
Ccdc50-203ENSMUST00000100026 Gm10542F6XDR3 90 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms