Protein–RNA interactions for Protein: Q30KN1

Defb47, Beta-defensin 41, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb47Q30KN1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Defb47Q30KN1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Defb47Q30KN1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Defb47Q30KN1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Defb47Q30KN1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Defb47Q30KN1 Psd-208ENSMUST00000224556 2034 ntBASIC21.9■■□□□ 1.1
Defb47Q30KN1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Defb47Q30KN1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Defb47Q30KN1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Defb47Q30KN1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Defb47Q30KN1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Defb47Q30KN1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Defb47Q30KN1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Defb47Q30KN1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Defb47Q30KN1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Defb47Q30KN1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Defb47Q30KN1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Defb47Q30KN1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Defb47Q30KN1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Defb47Q30KN1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Defb47Q30KN1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Defb47Q30KN1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Defb47Q30KN1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Defb47Q30KN1 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.04■□□□□ 0.8
Defb47Q30KN1 Gm25239-201ENSMUST00000174915 86 ntBASIC20.03■□□□□ 0.8
Defb47Q30KN1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.99■□□□□ 0.79
Defb47Q30KN1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Defb47Q30KN1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Defb47Q30KN1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Defb47Q30KN1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Defb47Q30KN1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.72■□□□□ 0.75
Defb47Q30KN1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Defb47Q30KN1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Defb47Q30KN1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Defb47Q30KN1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.64■□□□□ 0.73
Defb47Q30KN1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Defb47Q30KN1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Defb47Q30KN1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Defb47Q30KN1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Defb47Q30KN1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Defb47Q30KN1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Defb47Q30KN1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Defb47Q30KN1 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.28■□□□□ 0.68
Defb47Q30KN1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Defb47Q30KN1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Defb47Q30KN1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Defb47Q30KN1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Defb47Q30KN1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Defb47Q30KN1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Defb47Q30KN1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Defb47Q30KN1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Defb47Q30KN1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.1■□□□□ 0.65
Defb47Q30KN1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Defb47Q30KN1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.03■□□□□ 0.64
Defb47Q30KN1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Defb47Q30KN1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Defb47Q30KN1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.98■□□□□ 0.63
Defb47Q30KN1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Defb47Q30KN1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Defb47Q30KN1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Defb47Q30KN1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.88■□□□□ 0.61
Defb47Q30KN1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Defb47Q30KN1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Defb47Q30KN1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Defb47Q30KN1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.82■□□□□ 0.6
Defb47Q30KN1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Defb47Q30KN1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Defb47Q30KN1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb47Q30KN1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Defb47Q30KN1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Defb47Q30KN1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Defb47Q30KN1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Defb47Q30KN1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Defb47Q30KN1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Defb47Q30KN1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Defb47Q30KN1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Defb47Q30KN1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Defb47Q30KN1 Zxda-201ENSMUST00000117281 2621 ntBASIC18.67■□□□□ 0.58
Defb47Q30KN1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Defb47Q30KN1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.64■□□□□ 0.57
Defb47Q30KN1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Defb47Q30KN1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Defb47Q30KN1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Defb47Q30KN1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defb47Q30KN1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Defb47Q30KN1 Gm15042-201ENSMUST00000120212 883 ntBASIC18.54■□□□□ 0.56
Defb47Q30KN1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb47Q30KN1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Defb47Q30KN1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Defb47Q30KN1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb47Q30KN1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Defb47Q30KN1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.46■□□□□ 0.55
Defb47Q30KN1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.46■□□□□ 0.55
Defb47Q30KN1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Defb47Q30KN1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Defb47Q30KN1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.44■□□□□ 0.54
Defb47Q30KN1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Defb47Q30KN1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Defb47Q30KN1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Defb47Q30KN1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms