RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Rhox8Q6VSS7 320 aa27.33■■□□□ 1.97
Ccdc50-203ENSMUST00000100026 Esf1Q3V1V3 845 aaKnown RBP24.39■■□□□ 1.49
Ccdc50-203ENSMUST00000100026 Cngb1E1AZ71 1325 aa24.21■■□□□ 1.47
Ccdc50-203ENSMUST00000100026 Ehmt2Q9Z148 1263 aaKnown RBP24.2■■□□□ 1.46
Ccdc50-203ENSMUST00000100026 Ccdc136Q3TVA9 1136 aa24.13■■□□□ 1.45
Ccdc50-203ENSMUST00000100026 Ube2uB1AUC4 352 aa24.12■■□□□ 1.45
Ccdc50-203ENSMUST00000100026 Zeb1Q64318 1117 aa24.09■■□□□ 1.45
Ccdc50-203ENSMUST00000100026 Npm2Q80W85 207 aa23.8■■□□□ 1.4
Ccdc50-203ENSMUST00000100026 Gab3Q8BSM5 595 aa23.72■■□□□ 1.39
Ccdc50-203ENSMUST00000100026 Wdr66E9Q743 1299 aa23.68■■□□□ 1.38
Ccdc50-203ENSMUST00000100026 Rpgrip1Q9EPQ2 1331 aa23.66■■□□□ 1.38
Ccdc50-203ENSMUST00000100026 Las1lA2BE28 776 aaKnown RBP23.62■■□□□ 1.37
Ccdc50-203ENSMUST00000100026 Myt1lP97500 1187 aa23.53■■□□□ 1.36
Ccdc50-203ENSMUST00000100026 Trim41Q5NCC3 630 aa23.47■■□□□ 1.35
Ccdc50-203ENSMUST00000100026 Pelp1Q9DBD5 1123 aaKnown RBP23.09■■□□□ 1.29
Ccdc50-203ENSMUST00000100026 NischQ80TM9 1593 aa22.94■■□□□ 1.26
Ccdc50-203ENSMUST00000100026 Il27Q8K3I6 234 aa22.9■■□□□ 1.26
Ccdc50-203ENSMUST00000100026 UbtfP25976 765 aaKnown RBP22.73■■□□□ 1.23
Ccdc50-203ENSMUST00000100026 Slc24a1Q91WD8 1130 aa22.58■■□□□ 1.2
Ccdc50-203ENSMUST00000100026 Ap3b1Q9Z1T1 1105 aa22.38■■□□□ 1.17
Ccdc50-203ENSMUST00000100026 Os9Q8K2C7 672 aa22.35■■□□□ 1.17
Ccdc50-203ENSMUST00000100026 Abcc9P70170 1546 aa22.25■■□□□ 1.15
Ccdc50-203ENSMUST00000100026 Neurod1Q60867 357 aa22.25■■□□□ 1.15
Ccdc50-203ENSMUST00000100026 Stra8P70278 393 aa22.24■■□□□ 1.15
Ccdc50-203ENSMUST00000100026 Fam50aQ9WV03 339 aaKnown RBP22.23■■□□□ 1.15
Ccdc50-203ENSMUST00000100026 NefmP08553 848 aa22.18■■□□□ 1.14
Ccdc50-203ENSMUST00000100026 Gm35339A0A140LHH9 1649 aa22.17■■□□□ 1.14
Ccdc50-203ENSMUST00000100026 Amer1Q7TS75 1132 aa22.17■■□□□ 1.14
Ccdc50-203ENSMUST00000100026 Zcchc6Q5BLK4 1491 aaKnown RBP22.08■■□□□ 1.13
Ccdc50-203ENSMUST00000100026 Anp32bQ9EST5 272 aaKnown RBP22.05■■□□□ 1.12
Ccdc50-203ENSMUST00000100026 Ifnlr1Q8CGK5 535 aa21.97■■□□□ 1.11
Ccdc50-203ENSMUST00000100026 Gm13697A2AK42 830 aa21.97■■□□□ 1.11
Ccdc50-203ENSMUST00000100026 Zbtb7cQ8VCZ7 619 aa21.95■■□□□ 1.1
Ccdc50-203ENSMUST00000100026 NrdcQ8BHG1 1161 aa21.94■■□□□ 1.1
Ccdc50-203ENSMUST00000100026 HrcG5E8J6 738 aa21.93■■□□□ 1.1
Ccdc50-203ENSMUST00000100026 NclP09405 707 aaKnown RBP21.9■■□□□ 1.1
Ccdc50-203ENSMUST00000100026 CenpbP27790 599 aa21.9■■□□□ 1.1
Ccdc50-203ENSMUST00000100026 Acin1Q9JIX8 1338 aaKnown RBP21.86■■□□□ 1.09
Ccdc50-203ENSMUST00000100026 Npm1Q61937 292 aaKnown RBP21.84■■□□□ 1.09
Ccdc50-203ENSMUST00000100026 Hnrnpul2Q00PI9 745 aaKnown RBP21.76■■□□□ 1.07
Ccdc50-203ENSMUST00000100026 Eif5bQ05D44 1216 aaKnown RBP21.74■■□□□ 1.07
Ccdc50-203ENSMUST00000100026 NeflP08551 543 aa21.74■■□□□ 1.07
Ccdc50-203ENSMUST00000100026 Chic1Q8CBW7 227 aa21.71■■□□□ 1.07
Ccdc50-203ENSMUST00000100026 Plppr3Q7TPB0 716 aa21.7■■□□□ 1.06
Ccdc50-203ENSMUST00000100026 Ccdc180J3QNE4 1664 aa21.68■■□□□ 1.06
Ccdc50-203ENSMUST00000100026 Atp1b4Q99ME6 356 aa21.63■■□□□ 1.05
Ccdc50-203ENSMUST00000100026 Lmod2Q3UHZ5 550 aa21.61■■□□□ 1.05
Ccdc50-203ENSMUST00000100026 Ppargc1bQ8VHJ7 1014 aa21.57■■□□□ 1.04
Ccdc50-203ENSMUST00000100026 Ttbk1Q6PCN3 1308 aa21.56■■□□□ 1.04
Ccdc50-203ENSMUST00000100026 Cdk11bP24788 784 aaKnown RBP21.56■■□□□ 1.04
Ccdc50-203ENSMUST00000100026 Erich6D3Z6S9 713 aa21.54■■□□□ 1.04
Ccdc50-203ENSMUST00000100026 Gm13695A2AK44 830 aa21.52■■□□□ 1.04
Ccdc50-203ENSMUST00000100026 Fkbp15Q6P9Q6 1216 aaKnown RBP21.47■■□□□ 1.03
Ccdc50-203ENSMUST00000100026 Zbtb4Q5F293 982 aa21.45■■□□□ 1.02
Ccdc50-203ENSMUST00000100026 4933416C03RikQ3V063 378 aa21.44■■□□□ 1.02
Ccdc50-203ENSMUST00000100026 4930567H17RikQ3V0K5 233 aa21.43■■□□□ 1.02
Ccdc50-203ENSMUST00000100026 TonslQ6NZL6 1363 aa21.38■■□□□ 1.01
Ccdc50-203ENSMUST00000100026 Rtl1Q7M732 1744 aa21.37■■□□□ 1.01
Ccdc50-203ENSMUST00000100026 Prdm10Q3UTQ7 1184 aa21.34■■□□□ 1.01
Ccdc50-203ENSMUST00000100026 Nop58Q6DFW4 536 aaKnown RBP21.3■■□□□ 1
Ccdc50-203ENSMUST00000100026 Tnnt3Q9QZ47 272 aa21.28■■□□□ 1
Ccdc50-203ENSMUST00000100026 Plekhg3Q4VAC9 1341 aa21.28■■□□□ 1
Ccdc50-203ENSMUST00000100026 Nlrp6Q91WS2 869 aa21.24■□□□□ 0.99
Ccdc50-203ENSMUST00000100026 DiexfQ8BTT6 772 aaKnown RBP21.18■□□□□ 0.98
Ccdc50-203ENSMUST00000100026 Polr3glQ8R0C0 218 aa21.11■□□□□ 0.97
Ccdc50-203ENSMUST00000100026 Ubl4bQ9CQ84 188 aa21.11■□□□□ 0.97
Ccdc50-203ENSMUST00000100026 Safb2Q80YR5 991 aaKnown RBP21.1■□□□□ 0.97
Ccdc50-203ENSMUST00000100026 Mier1Q5UAK0 511 aa21.07■□□□□ 0.96
Ccdc50-203ENSMUST00000100026 Hdac5Q9Z2V6 1113 aa21.04■□□□□ 0.96
Ccdc50-203ENSMUST00000100026 Pcgf6Q99NA9 353 aa20.92■□□□□ 0.94
Ccdc50-203ENSMUST00000100026 Mapk8ip2Q9ERE9 830 aa20.83■□□□□ 0.92
Ccdc50-203ENSMUST00000100026 Rangap1P46061 589 aaKnown RBP20.83■□□□□ 0.92
Ccdc50-203ENSMUST00000100026 P3h3Q8CG70 732 aa20.8■□□□□ 0.92
Ccdc50-203ENSMUST00000100026 Supt5hO55201 1082 aaKnown RBP20.77■□□□□ 0.92
Ccdc50-203ENSMUST00000100026 Eid3Q3V124 375 aa20.77■□□□□ 0.92
Ccdc50-203ENSMUST00000100026 Clip1Q922J3 1391 aa20.74■□□□□ 0.91
Ccdc50-203ENSMUST00000100026 Brd4Q9ESU6 1400 aaKnown RBP20.73■□□□□ 0.91
Ccdc50-203ENSMUST00000100026 ArxO35085 564 aa20.7■□□□□ 0.9
Ccdc50-203ENSMUST00000100026 Chic2Q9D9G3 165 aa20.68■□□□□ 0.9
Ccdc50-203ENSMUST00000100026 ClspnQ80YR7 1315 aa20.58■□□□□ 0.88
Ccdc50-203ENSMUST00000100026 Abcc8B2RUS7 1588 aa20.57■□□□□ 0.88
Ccdc50-203ENSMUST00000100026 Csrnp3P59055 597 aa20.54■□□□□ 0.88
Ccdc50-203ENSMUST00000100026 Clstn2Q9ER65 966 aa20.53■□□□□ 0.88
Ccdc50-203ENSMUST00000100026 DaxxO35613 739 aa20.51■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 MyclP10166 368 aa20.51■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 Rad21Q61550 635 aaKnown RBP20.48■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 Ccer2J3QPU5 274 aa20.47■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 Irx6Q9ER75 438 aa20.47■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 Rtl5Q5DTT4 599 aa20.46■□□□□ 0.87
Ccdc50-203ENSMUST00000100026 Fgd1P52734 960 aa20.41■□□□□ 0.86
Ccdc50-203ENSMUST00000100026 BlmO88700 1416 aa20.41■□□□□ 0.86
Ccdc50-203ENSMUST00000100026 Anp32aO35381 247 aa20.36■□□□□ 0.85
Ccdc50-203ENSMUST00000100026 Arhgap27A2AB59 869 aa20.35■□□□□ 0.85
Ccdc50-203ENSMUST00000100026 Hsp90aa1P07901 733 aaKnown RBP20.34■□□□□ 0.85
Ccdc50-203ENSMUST00000100026 Trim26Q99PN3 545 aa20.34■□□□□ 0.85
Ccdc50-203ENSMUST00000100026 Rb1cc1Q9ESK9 1588 aa20.32■□□□□ 0.84
Ccdc50-203ENSMUST00000100026 IqubQ8CDK3 788 aa20.29■□□□□ 0.84
Ccdc50-203ENSMUST00000100026 Myt1Q8CFC2 1127 aa20.29■□□□□ 0.84
Ccdc50-203ENSMUST00000100026 NgefQ8CHT1 710 aa20.26■□□□□ 0.83
Ccdc50-203ENSMUST00000100026 Rgl3Q3UYI5 709 aa20.25■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms