Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Gm25239-201ENSMUST00000174915 86 ntBASIC29,71■■■□□ 2,35
P04943 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27,88■■■□□ 2,05
P04943 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27,24■■□□□ 1,95
P04943 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
P04943 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26,99■■□□□ 1,91
P04943 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
P04943 Gm15042-201ENSMUST00000120212 883 ntBASIC26,43■■□□□ 1,82
P04943 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
P04943 Gm15045-201ENSMUST00000117359 883 ntBASIC25,95■■□□□ 1,74
P04943 Psd-208ENSMUST00000224556 2034 ntBASIC25,92■■□□□ 1,74
P04943 Gm24109-201ENSMUST00000175489 103 ntBASIC25,56■■□□□ 1,68
P04943 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,51■■□□□ 1,67
P04943 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
P04943 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,47■■□□□ 1,67
P04943 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
P04943 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25,06■■□□□ 1,6
P04943 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
P04943 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,98■■□□□ 1,59
P04943 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,97■■□□□ 1,59
P04943 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
P04943 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
P04943 Gm23366-201ENSMUST00000175022 89 ntBASIC24,9■■□□□ 1,58
P04943 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,89■■□□□ 1,57
P04943 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24,85■■□□□ 1,57
P04943 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,85■■□□□ 1,57
P04943 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,8■■□□□ 1,56
P04943 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,76■■□□□ 1,55
P04943 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
P04943 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
P04943 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
P04943 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
P04943 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,56■■□□□ 1,52
P04943 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,52■■□□□ 1,52
P04943 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,45■■□□□ 1,51
P04943 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
P04943 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,32■■□□□ 1,48
P04943 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
P04943 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24,23■■□□□ 1,47
P04943 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,17■■□□□ 1,46
P04943 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24,16■■□□□ 1,46
P04943 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
P04943 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,01■■□□□ 1,43
P04943 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,89■■□□□ 1,41
P04943 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,88■■□□□ 1,41
P04943 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,87■■□□□ 1,41
P04943 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,84■■□□□ 1,41
P04943 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,82■■□□□ 1,4
P04943 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
P04943 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,61■■□□□ 1,37
P04943 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
P04943 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
P04943 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,55■■□□□ 1,36
P04943 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,55■■□□□ 1,36
P04943 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,52■■□□□ 1,36
P04943 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23,49■■□□□ 1,35
P04943 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,41■■□□□ 1,34
P04943 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,34
P04943 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,33
P04943 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,37■■□□□ 1,33
P04943 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,35■■□□□ 1,33
P04943 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,33■■□□□ 1,33
P04943 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,3■■□□□ 1,32
P04943 Gm25238-201ENSMUST00000174914 89 ntBASIC23,3■■□□□ 1,32
P04943 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,29■■□□□ 1,32
P04943 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23,28■■□□□ 1,32
P04943 Gm27325-201ENSMUST00000175467 74 ntBASIC23,28■■□□□ 1,32
P04943 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,28■■□□□ 1,32
P04943 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,25■■□□□ 1,31
P04943 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23,24■■□□□ 1,31
P04943 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,22■■□□□ 1,31
P04943 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
P04943 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,09■■□□□ 1,29
P04943 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,07■■□□□ 1,28
P04943 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
P04943 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,99■■□□□ 1,27
P04943 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,95■■□□□ 1,26
P04943 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22,93■■□□□ 1,26
P04943 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,93■■□□□ 1,26
P04943 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,25
P04943 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
P04943 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
P04943 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,85■■□□□ 1,25
P04943 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22,8■■□□□ 1,24
P04943 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
P04943 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,78■■□□□ 1,24
P04943 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
P04943 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
P04943 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
P04943 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,74■■□□□ 1,23
P04943 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,73■■□□□ 1,23
P04943 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,73■■□□□ 1,23
P04943 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,73■■□□□ 1,23
P04943 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
P04943 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
P04943 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22,62■■□□□ 1,21
P04943 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,59■■□□□ 1,21
P04943 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,57■■□□□ 1,2
P04943 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22,57■■□□□ 1,2
P04943 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
P04943 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms