Protein–RNA interactions for Protein: Q6P8I6

Cox11, Cytochrome c oxidase assembly protein COX11, mitochondrial, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cox11Q6P8I6 Gm25239-201ENSMUST00000174915 86 ntBASIC25.99■■□□□ 1.75
Cox11Q6P8I6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cox11Q6P8I6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cox11Q6P8I6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cox11Q6P8I6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cox11Q6P8I6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cox11Q6P8I6 Gm15042-201ENSMUST00000120212 883 ntBASIC22.92■■□□□ 1.26
Cox11Q6P8I6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cox11Q6P8I6 Gm24109-201ENSMUST00000175489 103 ntBASIC22.39■■□□□ 1.17
Cox11Q6P8I6 Gm15045-201ENSMUST00000117359 883 ntBASIC22.34■■□□□ 1.17
Cox11Q6P8I6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cox11Q6P8I6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Cox11Q6P8I6 Psd-208ENSMUST00000224556 2034 ntBASIC22.16■■□□□ 1.14
Cox11Q6P8I6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cox11Q6P8I6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cox11Q6P8I6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.83■■□□□ 1.09
Cox11Q6P8I6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cox11Q6P8I6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cox11Q6P8I6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cox11Q6P8I6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cox11Q6P8I6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cox11Q6P8I6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cox11Q6P8I6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cox11Q6P8I6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cox11Q6P8I6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.41■■□□□ 1.02
Cox11Q6P8I6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cox11Q6P8I6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cox11Q6P8I6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cox11Q6P8I6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cox11Q6P8I6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cox11Q6P8I6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cox11Q6P8I6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cox11Q6P8I6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cox11Q6P8I6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cox11Q6P8I6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cox11Q6P8I6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cox11Q6P8I6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.01■□□□□ 0.95
Cox11Q6P8I6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cox11Q6P8I6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.94■□□□□ 0.94
Cox11Q6P8I6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cox11Q6P8I6 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.9■□□□□ 0.94
Cox11Q6P8I6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cox11Q6P8I6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cox11Q6P8I6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cox11Q6P8I6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.69■□□□□ 0.9
Cox11Q6P8I6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cox11Q6P8I6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cox11Q6P8I6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cox11Q6P8I6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.67■□□□□ 0.9
Cox11Q6P8I6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cox11Q6P8I6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cox11Q6P8I6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cox11Q6P8I6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cox11Q6P8I6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.57■□□□□ 0.88
Cox11Q6P8I6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cox11Q6P8I6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cox11Q6P8I6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cox11Q6P8I6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cox11Q6P8I6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cox11Q6P8I6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cox11Q6P8I6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cox11Q6P8I6 Gm25238-201ENSMUST00000174914 89 ntBASIC20.41■□□□□ 0.86
Cox11Q6P8I6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cox11Q6P8I6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.37■□□□□ 0.85
Cox11Q6P8I6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.34■□□□□ 0.85
Cox11Q6P8I6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cox11Q6P8I6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cox11Q6P8I6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cox11Q6P8I6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Cox11Q6P8I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.14■□□□□ 0.81
Cox11Q6P8I6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cox11Q6P8I6 Gm27325-201ENSMUST00000175467 74 ntBASIC20.1■□□□□ 0.81
Cox11Q6P8I6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cox11Q6P8I6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cox11Q6P8I6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.06■□□□□ 0.8
Cox11Q6P8I6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cox11Q6P8I6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cox11Q6P8I6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20■□□□□ 0.79
Cox11Q6P8I6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cox11Q6P8I6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cox11Q6P8I6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.97■□□□□ 0.79
Cox11Q6P8I6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cox11Q6P8I6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.96■□□□□ 0.79
Cox11Q6P8I6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.93■□□□□ 0.78
Cox11Q6P8I6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.93■□□□□ 0.78
Cox11Q6P8I6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.89■□□□□ 0.78
Cox11Q6P8I6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cox11Q6P8I6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cox11Q6P8I6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cox11Q6P8I6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cox11Q6P8I6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cox11Q6P8I6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cox11Q6P8I6 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.84■□□□□ 0.77
Cox11Q6P8I6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cox11Q6P8I6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cox11Q6P8I6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cox11Q6P8I6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cox11Q6P8I6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms