Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Lst1O08843 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22,26■■□□□ 1,15
Lst1O08843 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22,13■■□□□ 1,13
Lst1O08843 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21,91■■□□□ 1,1
Lst1O08843 Psd-208ENSMUST00000224556 2034 ntBASIC21,75■■□□□ 1,07
Lst1O08843 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Lst1O08843 Gm25239-201ENSMUST00000174915 86 ntBASIC21,3■■□□□ 1
Lst1O08843 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Lst1O08843 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20,9■□□□□ 0,94
Lst1O08843 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20,73■□□□□ 0,91
Lst1O08843 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20,69■□□□□ 0,9
Lst1O08843 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Lst1O08843 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Lst1O08843 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Lst1O08843 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Lst1O08843 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,4■□□□□ 0,86
Lst1O08843 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20,32■□□□□ 0,84
Lst1O08843 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20,3■□□□□ 0,84
Lst1O08843 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20,06■□□□□ 0,8
Lst1O08843 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19,99■□□□□ 0,79
Lst1O08843 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19,96■□□□□ 0,79
Lst1O08843 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19,85■□□□□ 0,77
Lst1O08843 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19,84■□□□□ 0,77
Lst1O08843 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,76
Lst1O08843 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19,82■□□□□ 0,76
Lst1O08843 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19,79■□□□□ 0,76
Lst1O08843 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19,74■□□□□ 0,75
Lst1O08843 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Lst1O08843 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19,73■□□□□ 0,75
Lst1O08843 Gm42596-201ENSMUST00000196305 1958 ntBASIC19,68■□□□□ 0,74
Lst1O08843 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19,67■□□□□ 0,74
Lst1O08843 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19,66■□□□□ 0,74
Lst1O08843 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19,64■□□□□ 0,74
Lst1O08843 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19,51■□□□□ 0,71
Lst1O08843 Gm15042-201ENSMUST00000120212 883 ntBASIC19,51■□□□□ 0,71
Lst1O08843 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Lst1O08843 Gm10524-201ENSMUST00000181931 1893 ntBASIC19,48■□□□□ 0,71
Lst1O08843 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19,42■□□□□ 0,7
Lst1O08843 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19,4■□□□□ 0,7
Lst1O08843 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19,4■□□□□ 0,7
Lst1O08843 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19,37■□□□□ 0,69
Lst1O08843 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19,37■□□□□ 0,69
Lst1O08843 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Lst1O08843 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19,35■□□□□ 0,69
Lst1O08843 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19,33■□□□□ 0,69
Lst1O08843 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19,3■□□□□ 0,68
Lst1O08843 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19,27■□□□□ 0,68
Lst1O08843 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19,25■□□□□ 0,67
Lst1O08843 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19,22■□□□□ 0,67
Lst1O08843 Gm15045-201ENSMUST00000117359 883 ntBASIC19,19■□□□□ 0,66
Lst1O08843 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19,17■□□□□ 0,66
Lst1O08843 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19,16■□□□□ 0,66
Lst1O08843 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19,14■□□□□ 0,65
Lst1O08843 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19,1■□□□□ 0,65
Lst1O08843 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Lst1O08843 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19,06■□□□□ 0,64
Lst1O08843 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18,99■□□□□ 0,63
Lst1O08843 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,96■□□□□ 0,63
Lst1O08843 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18,96■□□□□ 0,63
Lst1O08843 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18,91■□□□□ 0,62
Lst1O08843 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18,91■□□□□ 0,62
Lst1O08843 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18,88■□□□□ 0,61
Lst1O08843 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18,87■□□□□ 0,61
Lst1O08843 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18,85■□□□□ 0,61
Lst1O08843 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,82■□□□□ 0,6
Lst1O08843 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18,81■□□□□ 0,6
Lst1O08843 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Lst1O08843 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18,79■□□□□ 0,6
Lst1O08843 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18,79■□□□□ 0,6
Lst1O08843 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,6
Lst1O08843 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Lst1O08843 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18,74■□□□□ 0,59
Lst1O08843 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Lst1O08843 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18,69■□□□□ 0,58
Lst1O08843 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18,68■□□□□ 0,58
Lst1O08843 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18,67■□□□□ 0,58
Lst1O08843 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Lst1O08843 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18,64■□□□□ 0,57
Lst1O08843 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18,62■□□□□ 0,57
Lst1O08843 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18,61■□□□□ 0,57
Lst1O08843 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Lst1O08843 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18,56■□□□□ 0,56
Lst1O08843 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18,52■□□□□ 0,56
Lst1O08843 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18,49■□□□□ 0,55
Lst1O08843 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18,49■□□□□ 0,55
Lst1O08843 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18,48■□□□□ 0,55
Lst1O08843 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Lst1O08843 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18,46■□□□□ 0,55
Lst1O08843 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18,44■□□□□ 0,54
Lst1O08843 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18,41■□□□□ 0,54
Lst1O08843 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18,41■□□□□ 0,54
Lst1O08843 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18,4■□□□□ 0,54
Lst1O08843 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18,39■□□□□ 0,53
Lst1O08843 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18,38■□□□□ 0,53
Lst1O08843 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Lst1O08843 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18,35■□□□□ 0,53
Lst1O08843 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18,35■□□□□ 0,53
Lst1O08843 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18,34■□□□□ 0,53
Lst1O08843 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18,29■□□□□ 0,52
Lst1O08843 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18,27■□□□□ 0,52
Retrieved 100 of 76,532 protein–RNA pairs in 19,2 ms