Protein–RNA interactions for Protein: O08843

Lst1, Leukocyte-specific transcript 1 protein, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lst1O08843 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lst1O08843 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Lst1O08843 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lst1O08843 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lst1O08843 Psd-208ENSMUST00000224556 2034 ntBASIC21.75■■□□□ 1.07
Lst1O08843 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lst1O08843 Gm25239-201ENSMUST00000174915 86 ntBASIC21.3■■□□□ 1
Lst1O08843 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lst1O08843 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lst1O08843 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lst1O08843 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lst1O08843 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lst1O08843 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lst1O08843 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lst1O08843 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lst1O08843 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lst1O08843 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lst1O08843 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lst1O08843 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.06■□□□□ 0.8
Lst1O08843 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lst1O08843 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lst1O08843 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Lst1O08843 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lst1O08843 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lst1O08843 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lst1O08843 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lst1O08843 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC19.74■□□□□ 0.75
Lst1O08843 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lst1O08843 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lst1O08843 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.68■□□□□ 0.74
Lst1O08843 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lst1O08843 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lst1O08843 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.64■□□□□ 0.74
Lst1O08843 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lst1O08843 Gm15042-201ENSMUST00000120212 883 ntBASIC19.51■□□□□ 0.71
Lst1O08843 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lst1O08843 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.48■□□□□ 0.71
Lst1O08843 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lst1O08843 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.4■□□□□ 0.7
Lst1O08843 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lst1O08843 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lst1O08843 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lst1O08843 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lst1O08843 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Lst1O08843 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.33■□□□□ 0.69
Lst1O08843 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lst1O08843 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lst1O08843 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lst1O08843 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lst1O08843 Gm15045-201ENSMUST00000117359 883 ntBASIC19.19■□□□□ 0.66
Lst1O08843 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lst1O08843 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lst1O08843 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lst1O08843 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.1■□□□□ 0.65
Lst1O08843 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Lst1O08843 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Lst1O08843 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lst1O08843 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lst1O08843 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lst1O08843 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lst1O08843 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lst1O08843 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lst1O08843 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Lst1O08843 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lst1O08843 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lst1O08843 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lst1O08843 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lst1O08843 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lst1O08843 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lst1O08843 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lst1O08843 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lst1O08843 CT025624.2-201ENSMUST00000223609 1909 ntBASIC18.74■□□□□ 0.59
Lst1O08843 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lst1O08843 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lst1O08843 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lst1O08843 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lst1O08843 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lst1O08843 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.64■□□□□ 0.57
Lst1O08843 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lst1O08843 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lst1O08843 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lst1O08843 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lst1O08843 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lst1O08843 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lst1O08843 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.49■□□□□ 0.55
Lst1O08843 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lst1O08843 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lst1O08843 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lst1O08843 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lst1O08843 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lst1O08843 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.41■□□□□ 0.54
Lst1O08843 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Lst1O08843 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lst1O08843 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.38■□□□□ 0.53
Lst1O08843 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lst1O08843 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lst1O08843 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Lst1O08843 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lst1O08843 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Lst1O08843 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms