Protein–RNA interactions for Protein: Q3UPR9

Sbspon, Somatomedin-B and thrombospondin type-1 domain-containing protein, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SbsponQ3UPR9 Gm25239-201ENSMUST00000174915 86 ntBASIC31.53■■■□□ 2.64
SbsponQ3UPR9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
SbsponQ3UPR9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SbsponQ3UPR9 Gm24109-201ENSMUST00000175489 103 ntBASIC27.51■■□□□ 1.99
SbsponQ3UPR9 Gm15042-201ENSMUST00000120212 883 ntBASIC27.2■■□□□ 1.94
SbsponQ3UPR9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SbsponQ3UPR9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SbsponQ3UPR9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SbsponQ3UPR9 Gm15045-201ENSMUST00000117359 883 ntBASIC26.51■■□□□ 1.83
SbsponQ3UPR9 Gm23366-201ENSMUST00000175022 89 ntBASIC26.28■■□□□ 1.8
SbsponQ3UPR9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SbsponQ3UPR9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.79■■□□□ 1.72
SbsponQ3UPR9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
SbsponQ3UPR9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.51■■□□□ 1.67
SbsponQ3UPR9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SbsponQ3UPR9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SbsponQ3UPR9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SbsponQ3UPR9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SbsponQ3UPR9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SbsponQ3UPR9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SbsponQ3UPR9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.03■■□□□ 1.6
SbsponQ3UPR9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SbsponQ3UPR9 Gm25238-201ENSMUST00000174914 89 ntBASIC24.99■■□□□ 1.59
SbsponQ3UPR9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SbsponQ3UPR9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SbsponQ3UPR9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SbsponQ3UPR9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SbsponQ3UPR9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SbsponQ3UPR9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SbsponQ3UPR9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
SbsponQ3UPR9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.32■■□□□ 1.48
SbsponQ3UPR9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SbsponQ3UPR9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SbsponQ3UPR9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SbsponQ3UPR9 Gm25262-201ENSMUST00000174934 133 ntBASIC24.14■■□□□ 1.45
SbsponQ3UPR9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.14■■□□□ 1.45
SbsponQ3UPR9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.12■■□□□ 1.45
SbsponQ3UPR9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SbsponQ3UPR9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SbsponQ3UPR9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.91■■□□□ 1.42
SbsponQ3UPR9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.9■■□□□ 1.42
SbsponQ3UPR9 Gm27325-201ENSMUST00000175467 74 ntBASIC23.75■■□□□ 1.39
SbsponQ3UPR9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.75■■□□□ 1.39
SbsponQ3UPR9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.74■■□□□ 1.39
SbsponQ3UPR9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SbsponQ3UPR9 Gm26115-201ENSMUST00000175605 87 ntBASIC23.69■■□□□ 1.38
SbsponQ3UPR9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
SbsponQ3UPR9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SbsponQ3UPR9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SbsponQ3UPR9 Rab21-202ENSMUST00000218831 843 ntBASIC23.56■■□□□ 1.36
SbsponQ3UPR9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.55■■□□□ 1.36
SbsponQ3UPR9 Gm8109-201ENSMUST00000194076 746 ntBASIC23.51■■□□□ 1.35
SbsponQ3UPR9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SbsponQ3UPR9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SbsponQ3UPR9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SbsponQ3UPR9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
SbsponQ3UPR9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SbsponQ3UPR9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SbsponQ3UPR9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SbsponQ3UPR9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SbsponQ3UPR9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.33■■□□□ 1.32
SbsponQ3UPR9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.25■■□□□ 1.31
SbsponQ3UPR9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
SbsponQ3UPR9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.19■■□□□ 1.3
SbsponQ3UPR9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.13■■□□□ 1.29
SbsponQ3UPR9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SbsponQ3UPR9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SbsponQ3UPR9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SbsponQ3UPR9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SbsponQ3UPR9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.92■■□□□ 1.26
SbsponQ3UPR9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SbsponQ3UPR9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SbsponQ3UPR9 Psd-208ENSMUST00000224556 2034 ntBASIC22.91■■□□□ 1.26
SbsponQ3UPR9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.89■■□□□ 1.26
SbsponQ3UPR9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.89■■□□□ 1.25
SbsponQ3UPR9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SbsponQ3UPR9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
SbsponQ3UPR9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SbsponQ3UPR9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SbsponQ3UPR9 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.8■■□□□ 1.24
SbsponQ3UPR9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.79■■□□□ 1.24
SbsponQ3UPR9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
SbsponQ3UPR9 Gm24804-201ENSMUST00000174982 85 ntBASIC22.68■■□□□ 1.22
SbsponQ3UPR9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.65■■□□□ 1.22
SbsponQ3UPR9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SbsponQ3UPR9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.62■■□□□ 1.21
SbsponQ3UPR9 Gm27322-201ENSMUST00000184007 104 ntBASIC22.61■■□□□ 1.21
SbsponQ3UPR9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SbsponQ3UPR9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SbsponQ3UPR9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
SbsponQ3UPR9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SbsponQ3UPR9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SbsponQ3UPR9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SbsponQ3UPR9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.49■■□□□ 1.19
SbsponQ3UPR9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.48■■□□□ 1.19
SbsponQ3UPR9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SbsponQ3UPR9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SbsponQ3UPR9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SbsponQ3UPR9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SbsponQ3UPR9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms