Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Igkv3-4A0A140T8Q4 Gm25239-201ENSMUST00000174915 86 ntBASIC20,77■□□□□ 0,92
Igkv3-4A0A140T8Q4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20,22■□□□□ 0,83
Igkv3-4A0A140T8Q4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,11■□□□□ 0,81
Igkv3-4A0A140T8Q4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19,81■□□□□ 0,76
Igkv3-4A0A140T8Q4 Psd-208ENSMUST00000224556 2034 ntBASIC19,75■□□□□ 0,75
Igkv3-4A0A140T8Q4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19,45■□□□□ 0,7
Igkv3-4A0A140T8Q4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19,44■□□□□ 0,7
Igkv3-4A0A140T8Q4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19,08■□□□□ 0,64
Igkv3-4A0A140T8Q4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,05■□□□□ 0,64
Igkv3-4A0A140T8Q4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0,63
Igkv3-4A0A140T8Q4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18,99■□□□□ 0,63
Igkv3-4A0A140T8Q4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18,86■□□□□ 0,61
Igkv3-4A0A140T8Q4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv3-4A0A140T8Q4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Igkv3-4A0A140T8Q4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Igkv3-4A0A140T8Q4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18,67■□□□□ 0,58
Igkv3-4A0A140T8Q4 Gm15042-201ENSMUST00000120212 883 ntBASIC18,65■□□□□ 0,58
Igkv3-4A0A140T8Q4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18,64■□□□□ 0,57
Igkv3-4A0A140T8Q4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,6■□□□□ 0,57
Igkv3-4A0A140T8Q4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18,55■□□□□ 0,56
Igkv3-4A0A140T8Q4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18,53■□□□□ 0,56
Igkv3-4A0A140T8Q4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18,51■□□□□ 0,55
Igkv3-4A0A140T8Q4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18,5■□□□□ 0,55
Igkv3-4A0A140T8Q4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18,44■□□□□ 0,54
Igkv3-4A0A140T8Q4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18,39■□□□□ 0,53
Igkv3-4A0A140T8Q4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18,26■□□□□ 0,51
Igkv3-4A0A140T8Q4 Gm15045-201ENSMUST00000117359 883 ntBASIC18,21■□□□□ 0,51
Igkv3-4A0A140T8Q4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,18■□□□□ 0,5
Igkv3-4A0A140T8Q4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18,17■□□□□ 0,5
Igkv3-4A0A140T8Q4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18,03■□□□□ 0,48
Igkv3-4A0A140T8Q4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv3-4A0A140T8Q4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv3-4A0A140T8Q4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17,97■□□□□ 0,47
Igkv3-4A0A140T8Q4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17,93■□□□□ 0,46
Igkv3-4A0A140T8Q4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17,92■□□□□ 0,46
Igkv3-4A0A140T8Q4 Gm42596-201ENSMUST00000196305 1958 ntBASIC17,84■□□□□ 0,45
Igkv3-4A0A140T8Q4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17,83■□□□□ 0,44
Igkv3-4A0A140T8Q4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17,82■□□□□ 0,44
Igkv3-4A0A140T8Q4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17,8■□□□□ 0,44
Igkv3-4A0A140T8Q4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17,79■□□□□ 0,44
Igkv3-4A0A140T8Q4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17,78■□□□□ 0,44
Igkv3-4A0A140T8Q4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17,75■□□□□ 0,43
Igkv3-4A0A140T8Q4 Gm24109-201ENSMUST00000175489 103 ntBASIC17,74■□□□□ 0,43
Igkv3-4A0A140T8Q4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17,74■□□□□ 0,43
Igkv3-4A0A140T8Q4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17,71■□□□□ 0,43
Igkv3-4A0A140T8Q4 Gm10524-201ENSMUST00000181931 1893 ntBASIC17,71■□□□□ 0,43
Igkv3-4A0A140T8Q4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17,7■□□□□ 0,42
Igkv3-4A0A140T8Q4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17,69■□□□□ 0,42
Igkv3-4A0A140T8Q4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17,69■□□□□ 0,42
Igkv3-4A0A140T8Q4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17,67■□□□□ 0,42
Igkv3-4A0A140T8Q4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17,65■□□□□ 0,42
Igkv3-4A0A140T8Q4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17,65■□□□□ 0,42
Igkv3-4A0A140T8Q4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Igkv3-4A0A140T8Q4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17,63■□□□□ 0,41
Igkv3-4A0A140T8Q4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17,61■□□□□ 0,41
Igkv3-4A0A140T8Q4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17,61■□□□□ 0,41
Igkv3-4A0A140T8Q4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17,57■□□□□ 0,4
Igkv3-4A0A140T8Q4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17,55■□□□□ 0,4
Igkv3-4A0A140T8Q4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17,52■□□□□ 0,4
Igkv3-4A0A140T8Q4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17,51■□□□□ 0,39
Igkv3-4A0A140T8Q4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17,5■□□□□ 0,39
Igkv3-4A0A140T8Q4 Gm23366-201ENSMUST00000175022 89 ntBASIC17,48■□□□□ 0,39
Igkv3-4A0A140T8Q4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17,47■□□□□ 0,39
Igkv3-4A0A140T8Q4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17,46■□□□□ 0,39
Igkv3-4A0A140T8Q4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17,4■□□□□ 0,38
Igkv3-4A0A140T8Q4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17,37■□□□□ 0,37
Igkv3-4A0A140T8Q4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17,35■□□□□ 0,37
Igkv3-4A0A140T8Q4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17,34■□□□□ 0,37
Igkv3-4A0A140T8Q4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17,32■□□□□ 0,36
Igkv3-4A0A140T8Q4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17,29■□□□□ 0,36
Igkv3-4A0A140T8Q4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17,27■□□□□ 0,36
Igkv3-4A0A140T8Q4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17,26■□□□□ 0,35
Igkv3-4A0A140T8Q4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17,23■□□□□ 0,35
Igkv3-4A0A140T8Q4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17,22■□□□□ 0,35
Igkv3-4A0A140T8Q4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17,21■□□□□ 0,35
Igkv3-4A0A140T8Q4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17,2■□□□□ 0,34
Igkv3-4A0A140T8Q4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17,17■□□□□ 0,34
Igkv3-4A0A140T8Q4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17,16■□□□□ 0,34
Igkv3-4A0A140T8Q4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17,15■□□□□ 0,34
Igkv3-4A0A140T8Q4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17,15■□□□□ 0,34
Igkv3-4A0A140T8Q4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC17,15■□□□□ 0,34
Igkv3-4A0A140T8Q4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17,14■□□□□ 0,33
Igkv3-4A0A140T8Q4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17,13■□□□□ 0,33
Igkv3-4A0A140T8Q4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17,1■□□□□ 0,33
Igkv3-4A0A140T8Q4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC17,1■□□□□ 0,33
Igkv3-4A0A140T8Q4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17,09■□□□□ 0,33
Igkv3-4A0A140T8Q4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,09■□□□□ 0,33
Igkv3-4A0A140T8Q4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17,06■□□□□ 0,32
Igkv3-4A0A140T8Q4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17,04■□□□□ 0,32
Igkv3-4A0A140T8Q4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17,04■□□□□ 0,32
Igkv3-4A0A140T8Q4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17,04■□□□□ 0,32
Igkv3-4A0A140T8Q4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17,04■□□□□ 0,32
Igkv3-4A0A140T8Q4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17,02■□□□□ 0,31
Igkv3-4A0A140T8Q4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17,02■□□□□ 0,31
Igkv3-4A0A140T8Q4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv3-4A0A140T8Q4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0,31
Igkv3-4A0A140T8Q4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16,96■□□□□ 0,31
Igkv3-4A0A140T8Q4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16,94■□□□□ 0,3
Igkv3-4A0A140T8Q4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16,93■□□□□ 0,3
Retrieved 100 of 76,532 protein–RNA pairs in 7,9 ms