RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	RRP43	P25359	394 aa	Predicted RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	IMG2	P25642	146 aa	Predicted RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	MUP3	P38734	546 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	RPN3	P40016	523 aa	Known RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	EPL1	P43572	832 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	COG1	P53079	417 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	YGR130C	P53278	816 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	LSB1	P53281	241 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	ACS1	Q01574	713 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	LEE1	Q02799	301 aa	Known RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	RCO1	Q04779	684 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	YPR196W	Q06595	470 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	CRD1	Q07560	283 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	CHS5	Q12114	671 aa	Known RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	RUD3	Q12234	484 aa	Known RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	HER1	Q12276	1246 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	ATG11	Q12527	1178 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	SEC39	Q12745	709 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	CET1	O13297	549 aa	Predicted RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	PRC1	P00729	532 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	MRPL40	P36534	297 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	UBP13	P38187	747 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	YDR089W	P38966	869 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	RGI2	P40188	164 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	ARP5	P53946	755 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	HDA1	P53973	706 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	YMR210W	Q03649	449 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	STP4	Q07351	490 aa		3.5	□□□□□ -1.85
CCM1	YGR150C	ALG6	Q12001	544 aa	Known RBP	3.5	□□□□□ -1.85
CCM1	YGR150C	PHO91	P27514	894 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	SRP101	P32916	621 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YUH1	P35127	236 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	MRPL16	P38064	232 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YBL028C	P38202	106 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	POA1	P38218	177 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YHR054C	P38780	354 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	SLN1	P39928	1220 aa	Predicted RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	PFK26	P40433	827 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	IST3	P40565	148 aa	Predicted RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	MET28	P40573	187 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	CEP3	P40969	608 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	MET12	P46151	657 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	BPL1	P48445	690 aa	Predicted RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	YGR045C	P53229	120 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	PDR16	P53860	351 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	PCL8	Q08966	492 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	RIM20	Q12033	661 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YOR022C	Q12204	715 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	RPP1A	P05318	106 aa	Predicted RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	GCD1	P09032	578 aa	Predicted RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	ERV1	P27882	189 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	LRG1	P35688	1017 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	UBP11	P36026	717 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	PIM1	P36775	1133 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YSW1	P38280	609 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YER034W	P40022	185 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	RRT14	P40470	206 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	CAB2	P40506	365 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	VMA13	P41807	478 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	PEF1	P53238	335 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	ARX1	Q03862	593 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	ROY1	Q04847	553 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	KAP95	Q06142	861 aa	Known RBP	3.49	□□□□□ -1.85
CCM1	YGR150C	GPB1	Q08886	897 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	AFI1	Q99222	893 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	YOR019W	Q99248	730 aa		3.49	□□□□□ -1.85
CCM1	YGR150C	RPS9A	O13516	197 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	URA3	P03962	267 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	ARG82	P07250	355 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	CAF20	P12962	161 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	PRE8	P23639	250 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	SMY1	P32364	656 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	WHI3	P34761	661 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	DED81	P38707	554 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	MIP6	P38760	659 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	GLO1	P50107	326 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	ALT2	P52892	507 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	NCS6	P53088	359 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	REG1	Q00816	1014 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	RRT8	Q08219	342 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	HOS1	Q12214	470 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-LR1	P0C2J4	438 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-F	P0CX61	438 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-GR2	P0CX62	438 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	DAP2	P18962	818 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	ADE2	P21264	571 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	SDH2	P21801	266 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	ARG1	P22768	420 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-C	P25383	438 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	YJU2	P28320	278 aa	Predicted RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	SRB2	P34162	210 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
CCM1	YGR150C	CST26	P38226	397 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	BUD8	P41698	603 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	LEM3	P42838	414 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	AAD10	P47182	288 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	LSC1	P53598	329 aa	Known RBP	3.48	□□□□□ -1.85
CCM1	YGR150C	MAK10	Q02197	733 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-DR2	Q03483	438 aa		3.48	□□□□□ -1.85
CCM1	YGR150C	TY2A-B	Q12260	438 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms