Protein–RNA interactions for Protein: P53238

PEF1, Peflin, yeastyeast

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEF1P53238 YML009W-BYML009W-B 477 nt17.34■□□□□ 0.37
PEF1P53238 NSR1YGR159C 1245 nt17.07■□□□□ 0.32
PEF1P53238 NOP1YDL014W 984 nt16.85■□□□□ 0.29
PEF1P53238 YKL036CYKL036C 393 nt15.69■□□□□ 0.1
PEF1P53238 MDJ1YFL016C 1536 nt15.11■□□□□ 0.01
PEF1P53238 Q0297Q0297 156 nt14.8□□□□□ -0.04
PEF1P53238 SRX1YKL086W 384 nt14.74□□□□□ -0.05
PEF1P53238 YJL027CYJL027C 417 nt14.69□□□□□ -0.06
PEF1P53238 SCS3YGL126W 1143 nt14.35□□□□□ -0.11
PEF1P53238 SSA3YBL075C 1950 nt14.26□□□□□ -0.13
PEF1P53238 YCR051WYCR051W 669 nt14.03□□□□□ -0.16
PEF1P53238 YOL085CYOL085C 342 nt13.6□□□□□ -0.23
PEF1P53238 PKP1YIL042C 1185 nt13.42□□□□□ -0.26
PEF1P53238 DBP2YNL112W 1641 nt13.39□□□□□ -0.27
PEF1P53238 RPP1BYDL130W 321 nt13.29□□□□□ -0.28
PEF1P53238 TRN1tP(UGG)A 72 nt13.26□□□□□ -0.29
PEF1P53238 SUF9tP(UGG)F 72 nt13.26□□□□□ -0.29
PEF1P53238 SUF8tP(UGG)H 72 nt13.26□□□□□ -0.29
PEF1P53238 tP(UGG)LtP(UGG)L 72 nt13.26□□□□□ -0.29
PEF1P53238 SUF7tP(UGG)M 72 nt13.26□□□□□ -0.29
PEF1P53238 tP(UGG)N1tP(UGG)N1 72 nt13.26□□□□□ -0.29
PEF1P53238 tP(UGG)N2tP(UGG)N2 72 nt13.26□□□□□ -0.29
PEF1P53238 tP(UGG)O1tP(UGG)O1 72 nt13.26□□□□□ -0.29
PEF1P53238 SUF11tP(UGG)O2 72 nt13.26□□□□□ -0.29
PEF1P53238 CCC1YLR220W 969 nt13.18□□□□□ -0.3
PEF1P53238 YBR190WYBR190W 312 nt13.03□□□□□ -0.32
PEF1P53238 ATS1YAL020C 1002 nt12.87□□□□□ -0.35
PEF1P53238 SCJ1YMR214W 1134 nt12.8□□□□□ -0.36
PEF1P53238 PET122YER153C 765 nt12.71□□□□□ -0.37
PEF1P53238 Q0182Q0182 405 nt12.7□□□□□ -0.38
PEF1P53238 RTC3YHR087W 336 nt12.7□□□□□ -0.38
PEF1P53238 tP(UGG)O3tP(UGG)O3 72 nt12.6□□□□□ -0.39
PEF1P53238 RVS167YDR388W 1449 nt12.6□□□□□ -0.39
PEF1P53238 SCR1SCR1 522 nt12.57□□□□□ -0.4
PEF1P53238 RRN5YLR141W 1092 nt12.36□□□□□ -0.43
PEF1P53238 MOT3YMR070W 1473 nt12.26□□□□□ -0.45
PEF1P53238 PUT4YOR348C 1884 nt12.21□□□□□ -0.46
PEF1P53238 SHR5YOL110W 714 nt12.19□□□□□ -0.46
PEF1P53238 YDJ1YNL064C 1230 nt12.16□□□□□ -0.46
PEF1P53238 RSB1YOR049C 1065 nt12.15□□□□□ -0.46
PEF1P53238 PAC11YDR488C 1602 nt12.14□□□□□ -0.47
PEF1P53238 YER088W-BYER088W-B 147 nt12.11□□□□□ -0.47
PEF1P53238 NVJ2YPR091C 2313 nt12.07□□□□□ -0.48
PEF1P53238 SSA4YER103W 1929 nt12.01□□□□□ -0.49
PEF1P53238 GAR1YHR089C 618 nt11.92□□□□□ -0.5
PEF1P53238 PST2YDR032C 597 nt11.89□□□□□ -0.51
PEF1P53238 DEP1YAL013W 1218 nt11.87□□□□□ -0.51
PEF1P53238 FPS1YLL043W 2010 nt11.87□□□□□ -0.51
PEF1P53238 ARE1YCR048W 1833 nt11.82□□□□□ -0.52
PEF1P53238 URN1YPR152C 1398 nt11.8□□□□□ -0.52
PEF1P53238 SPT5YML010W 3192 nt11.79□□□□□ -0.52
PEF1P53238 POA1YBR022W 534 nt11.77□□□□□ -0.53
PEF1P53238 BDF1YLR399C 2061 nt11.72□□□□□ -0.53
PEF1P53238 YHR049C-AYHR049C-A 297 nt11.69□□□□□ -0.54
PEF1P53238 SAH1YER043C 1350 nt11.67□□□□□ -0.54
PEF1P53238 OPI9YLR338W 858 nt11.64□□□□□ -0.55
PEF1P53238 BSC6YOL137W 1494 nt11.63□□□□□ -0.55
PEF1P53238 YNL208WYNL208W 600 nt11.63□□□□□ -0.55
PEF1P53238 RPN10YHR200W 807 nt11.61□□□□□ -0.55
PEF1P53238 SSA1YAL005C 1929 nt11.54□□□□□ -0.56
PEF1P53238 TAT1YBR069C 1860 nt11.52□□□□□ -0.57
PEF1P53238 TIR1YER011W 765 nt11.49□□□□□ -0.57
PEF1P53238 YKL097CYKL097C 411 nt11.49□□□□□ -0.57
PEF1P53238 SHU1YHL006C 453 nt11.4□□□□□ -0.58
PEF1P53238 BUD23YCR047C 828 nt11.37□□□□□ -0.59
PEF1P53238 PUN1YLR414C 792 nt11.32□□□□□ -0.6
PEF1P53238 YJR018WYJR018W 363 nt11.26□□□□□ -0.61
PEF1P53238 PTC2YER089C 1395 nt11.24□□□□□ -0.61
PEF1P53238 YAL037C-BYAL037C-B 975 nt11.23□□□□□ -0.61
PEF1P53238 SRB2YHR041C 633 nt11.22□□□□□ -0.61
PEF1P53238 NAB2YGL122C 1578 nt11.18□□□□□ -0.62
PEF1P53238 UME6YDR207C 2511 nt11.13□□□□□ -0.63
PEF1P53238 YJR120WYJR120W 351 nt11.12□□□□□ -0.63
PEF1P53238 RPP2BYDR382W 333 nt11.04□□□□□ -0.64
PEF1P53238 WWM1YFL010C 636 nt11.03□□□□□ -0.64
PEF1P53238 YOR139CYOR139C 393 nt11.03□□□□□ -0.64
PEF1P53238 MEP2YNL142W 1500 nt10.99□□□□□ -0.65
PEF1P53238 FIS1YIL065C 468 nt10.96□□□□□ -0.65
PEF1P53238 MNP1YGL068W 585 nt10.95□□□□□ -0.66
PEF1P53238 YGR021WYGR021W 873 nt10.95□□□□□ -0.66
PEF1P53238 HOM6YJR139C 1080 nt10.95□□□□□ -0.66
PEF1P53238 DAL1YIR027C 1383 nt10.93□□□□□ -0.66
PEF1P53238 NPL3YDR432W 1245 nt10.89□□□□□ -0.67
PEF1P53238 FPR4YLR449W 1179 nt10.87□□□□□ -0.67
PEF1P53238 BDH2YAL061W 1254 nt10.85□□□□□ -0.67
PEF1P53238 PHO4YFR034C 939 nt10.82□□□□□ -0.68
PEF1P53238 INM2YDR287W 879 nt10.81□□□□□ -0.68
PEF1P53238 YFL021C-AYFL021C-A 855 nt10.81□□□□□ -0.68
PEF1P53238 YPS1YLR120C 1710 nt10.8□□□□□ -0.68
PEF1P53238 RKM5YLR137W 1104 nt10.79□□□□□ -0.68
PEF1P53238 DCW1YKL046C 1350 nt10.77□□□□□ -0.69
PEF1P53238 YBL100CYBL100C 315 nt10.75□□□□□ -0.69
PEF1P53238 YOL037CYOL037C 354 nt10.75□□□□□ -0.69
PEF1P53238 YHR165W-AYHR165W-A 312 nt10.72□□□□□ -0.69
PEF1P53238 LSM3YLR438C-A 270 nt10.7□□□□□ -0.7
PEF1P53238 GUT2YIL155C 1950 nt10.67□□□□□ -0.7
PEF1P53238 YMR090WYMR090W 684 nt10.67□□□□□ -0.7
PEF1P53238 YDR095CYDR095C 411 nt10.66□□□□□ -0.7
PEF1P53238 EMI2YDR516C 1503 nt10.64□□□□□ -0.71
PEF1P53238 FUN26YAL022C 1554 nt10.64□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms