RNA–Protein interactions for RNA: YOL034W

SMC5, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC5, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC5YOL034W QCR6P00127 147 aa8.58□□□□□ -1.04
SMC5YOL034W SLX8P40072 274 aa8.58□□□□□ -1.04
SMC5YOL034W INO80P53115 1489 aa8.57□□□□□ -1.04
SMC5YOL034W SEC20P28791 383 aa8.56□□□□□ -1.04
SMC5YOL034W YNL011CP53980 444 aa8.56□□□□□ -1.04
SMC5YOL034W GAL11P19659 1081 aa8.55□□□□□ -1.04
SMC5YOL034W PIL1P53252 339 aaKnown RBP8.55□□□□□ -1.04
SMC5YOL034W DOS2P54858 310 aa8.55□□□□□ -1.04
SMC5YOL034W RAD2P07276 1031 aa8.53□□□□□ -1.04
SMC5YOL034W CKB1P43639 278 aa8.53□□□□□ -1.04
SMC5YOL034W MET10P39692 1035 aa8.53□□□□□ -1.04
SMC5YOL034W PEA2P40091 420 aa8.53□□□□□ -1.04
SMC5YOL034W HOS4P40480 1083 aa8.52□□□□□ -1.05
SMC5YOL034W MEH1Q02205 184 aa8.51□□□□□ -1.05
SMC5YOL034W RPA135P22138 1203 aaKnown RBP8.51□□□□□ -1.05
SMC5YOL034W GIR2Q03768 265 aaPredicted RBP8.5□□□□□ -1.05
SMC5YOL034W FPR4Q06205 392 aaPredicted RBP8.5□□□□□ -1.05
SMC5YOL034W PSK2Q08217 1101 aa8.5□□□□□ -1.05
SMC5YOL034W CDC11P32458 415 aa8.5□□□□□ -1.05
SMC5YOL034W YGR130CP53278 816 aa8.5□□□□□ -1.05
SMC5YOL034W MPE1P35728 441 aaKnown RBP8.49□□□□□ -1.05
SMC5YOL034W FUN12P39730 1002 aaKnown RBP8.49□□□□□ -1.05
SMC5YOL034W VPS4P52917 437 aa8.49□□□□□ -1.05
SMC5YOL034W YSH1Q06224 779 aaPredicted RBP8.48□□□□□ -1.05
SMC5YOL034W MCM1P11746 286 aa8.48□□□□□ -1.05
SMC5YOL034W HSC82P15108 705 aaKnown RBP8.48□□□□□ -1.05
SMC5YOL034W RIX1P38883 763 aaPredicted RBP8.47□□□□□ -1.05
SMC5YOL034W CFT2Q12102 859 aaPredicted RBP8.46□□□□□ -1.05
SMC5YOL034W SPT21P35209 758 aa8.46□□□□□ -1.06
SMC5YOL034W UBX5Q06682 500 aa8.46□□□□□ -1.06
SMC5YOL034W MTR4P47047 1073 aaKnown RBP8.45□□□□□ -1.06
SMC5YOL034W MRX12P47084 519 aa8.45□□□□□ -1.06
SMC5YOL034W PAM1P37304 830 aaKnown RBP8.44□□□□□ -1.06
SMC5YOL034W SPC110P32380 944 aa8.44□□□□□ -1.06
SMC5YOL034W PKH1Q03407 766 aa8.43□□□□□ -1.06
SMC5YOL034W YDR341CQ05506 607 aaKnown RBP8.43□□□□□ -1.06
SMC5YOL034W NMD2P38798 1089 aaKnown RBP8.42□□□□□ -1.06
SMC5YOL034W SEC9P40357 651 aa8.42□□□□□ -1.06
SMC5YOL034W PMC1P38929 1173 aaPredicted RBP8.41□□□□□ -1.06
SMC5YOL034W SSA4P22202 642 aaKnown RBP8.4□□□□□ -1.06
SMC5YOL034W RAD51P25454 400 aa8.4□□□□□ -1.06
SMC5YOL034W DJP1P40564 432 aa8.4□□□□□ -1.06
SMC5YOL034W ERP2P39704 215 aa8.39□□□□□ -1.07
SMC5YOL034W GDE1Q02979 1223 aa8.39□□□□□ -1.07
SMC5YOL034W RCF1Q03713 159 aa8.39□□□□□ -1.07
SMC5YOL034W ETT1Q08421 412 aaKnown RBP8.39□□□□□ -1.07
SMC5YOL034W TY1B-AO13527 1196 aaKnown RBP8.39□□□□□ -1.07
SMC5YOL034W SYH1Q02875 849 aaKnown RBP8.39□□□□□ -1.07
SMC5YOL034W TOM20P35180 183 aa8.38□□□□□ -1.07
SMC5YOL034W NMD3P38861 518 aaKnown RBP8.38□□□□□ -1.07
SMC5YOL034W TAF1P46677 1066 aa8.37□□□□□ -1.07
SMC5YOL034W CLF1Q12309 687 aaPredicted RBP8.37□□□□□ -1.07
SMC5YOL034W APL5Q08951 932 aaKnown RBP8.37□□□□□ -1.07
SMC5YOL034W YDL121CQ07541 149 aa8.36□□□□□ -1.07
SMC5YOL034W PET111P08468 800 aa8.36□□□□□ -1.07
SMC5YOL034W LEM3P42838 414 aa8.36□□□□□ -1.07
SMC5YOL034W OCA5P38738 679 aa8.35□□□□□ -1.07
SMC5YOL034W YAF9P53930 226 aa8.35□□□□□ -1.07
SMC5YOL034W POL5P39985 1022 aaKnown RBP8.35□□□□□ -1.07
SMC5YOL034W HEL2Q05580 639 aaKnown RBP8.35□□□□□ -1.07
SMC5YOL034W OPI1P21957 404 aa8.34□□□□□ -1.08
SMC5YOL034W BLI1P35727 113 aa8.33□□□□□ -1.08
SMC5YOL034W NOC2P39744 710 aaKnown RBP8.33□□□□□ -1.08
SMC5YOL034W ALD4P46367 519 aaKnown RBP8.33□□□□□ -1.08
SMC5YOL034W SEC27P41811 889 aaKnown RBP8.32□□□□□ -1.08
SMC5YOL034W CEF1Q03654 590 aaPredicted RBP8.32□□□□□ -1.08
SMC5YOL034W NNF2P53253 936 aa8.32□□□□□ -1.08
SMC5YOL034W NST1P53935 1240 aa8.32□□□□□ -1.08
SMC5YOL034W BOI2P39969 1040 aa8.31□□□□□ -1.08
SMC5YOL034W RRN6P32786 894 aa8.3□□□□□ -1.08
SMC5YOL034W VPS27P40343 622 aaKnown RBP8.3□□□□□ -1.08
SMC5YOL034W PRP43P53131 767 aaKnown RBP8.3□□□□□ -1.08
SMC5YOL034W TMA64Q04600 565 aaKnown RBP8.3□□□□□ -1.08
SMC5YOL034W VMA4P22203 233 aaKnown RBP8.3□□□□□ -1.08
SMC5YOL034W YLR257WQ06146 321 aaKnown RBP8.3□□□□□ -1.08
SMC5YOL034W MAM3Q12296 706 aa8.3□□□□□ -1.08
SMC5YOL034W SAP190P36123 1033 aa8.29□□□□□ -1.08
SMC5YOL034W PIM1P36775 1133 aa8.29□□□□□ -1.08
SMC5YOL034W TPM2P40414 161 aa8.29□□□□□ -1.08
SMC5YOL034W KIN1P13185 1064 aa8.28□□□□□ -1.08
SMC5YOL034W MFT1P33441 392 aaKnown RBP8.28□□□□□ -1.08
SMC5YOL034W ECM16Q04217 1267 aaKnown RBP8.28□□□□□ -1.08
SMC5YOL034W ERP4Q12450 207 aa8.28□□□□□ -1.08
SMC5YOL034W AIM20P40451 204 aa8.27□□□□□ -1.09
SMC5YOL034W IES1P43579 692 aa8.27□□□□□ -1.09
SMC5YOL034W YPR172WQ06608 200 aa8.27□□□□□ -1.09
SMC5YOL034W TY4B-PA0A0B7P3V8 1104 aa8.27□□□□□ -1.09
SMC5YOL034W HSP42Q12329 375 aa8.27□□□□□ -1.09
SMC5YOL034W TY4A-HQ6Q5P6 413 aa8.27□□□□□ -1.09
SMC5YOL034W NPR3P38742 1146 aa8.27□□□□□ -1.09
SMC5YOL034W YGL081WP53156 320 aa8.27□□□□□ -1.09
SMC5YOL034W PUS1Q12211 544 aaKnown RBP8.27□□□□□ -1.09
SMC5YOL034W YLL054CQ12244 843 aa8.26□□□□□ -1.09
SMC5YOL034W IMH1Q06704 911 aaKnown RBP8.26□□□□□ -1.09
SMC5YOL034W PWP2P25635 923 aaKnown RBP8.25□□□□□ -1.09
SMC5YOL034W RRP14P36080 434 aaKnown RBP8.25□□□□□ -1.09
SMC5YOL034W SNU66Q12420 587 aaPredicted RBP8.25□□□□□ -1.09
SMC5YOL034W NFU1P32860 256 aa8.25□□□□□ -1.09
SMC5YOL034W SSF2Q12153 453 aaPredicted RBP8.25□□□□□ -1.09
SMC5YOL034W MUM2P38236 366 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms