RNA–Protein interactions for RNA: YOL034W

SMC5, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC5, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC5YOL034W RQC2Q12532 1038 aaKnown RBP12.22□□□□□ -0.45
SMC5YOL034W TAF7Q05021 590 aa11.55□□□□□ -0.56
SMC5YOL034W BFR2Q06631 534 aaKnown RBP11.38□□□□□ -0.59
SMC5YOL034W DRS1P32892 752 aaKnown RBP11.22□□□□□ -0.61
SMC5YOL034W TFA1P36100 482 aa11.16□□□□□ -0.62
SMC5YOL034W URN1Q06525 465 aaKnown RBP10.82□□□□□ -0.68
SMC5YOL034W SIS2P36024 562 aa10.07□□□□□ -0.8
SMC5YOL034W LEO1P38439 464 aa10.04□□□□□ -0.8
SMC5YOL034W NAP1P25293 417 aaKnown RBP10.02□□□□□ -0.8
SMC5YOL034W IOC4Q04213 475 aa10.02□□□□□ -0.81
SMC5YOL034W DMA1P38823 416 aa10□□□□□ -0.81
SMC5YOL034W YRB30P53107 440 aaPredicted RBP9.95□□□□□ -0.82
SMC5YOL034W YFR016CP43597 1233 aaKnown RBP9.89□□□□□ -0.83
SMC5YOL034W EBP2P36049 427 aaKnown RBP9.87□□□□□ -0.83
SMC5YOL034W AIM44Q99299 758 aa9.8□□□□□ -0.84
SMC5YOL034W DIP2Q12220 943 aaPredicted RBP9.72□□□□□ -0.85
SMC5YOL034W CAB3P36076 571 aa9.72□□□□□ -0.85
SMC5YOL034W KRI1P42846 591 aaKnown RBP9.68□□□□□ -0.86
SMC5YOL034W RPS0BP46654 252 aaKnown RBP9.65□□□□□ -0.86
SMC5YOL034W AVT3P36062 692 aa9.64□□□□□ -0.87
SMC5YOL034W IFH1P39520 1085 aa9.62□□□□□ -0.87
SMC5YOL034W SNU71P53207 620 aaKnown RBP9.51□□□□□ -0.89
SMC5YOL034W ORC1P54784 914 aaPredicted RBP9.47□□□□□ -0.89
SMC5YOL034W TOP1P04786 769 aa9.46□□□□□ -0.9
SMC5YOL034W MNN4P36044 1178 aa9.44□□□□□ -0.9
SMC5YOL034W NOP2P40991 618 aaKnown RBP9.35□□□□□ -0.91
SMC5YOL034W CWC22P53333 577 aaKnown RBP9.33□□□□□ -0.92
SMC5YOL034W MDG1P53885 366 aa9.32□□□□□ -0.92
SMC5YOL034W DMA2P53924 522 aa9.25□□□□□ -0.93
SMC5YOL034W MTC1P47018 478 aaKnown RBP9.24□□□□□ -0.93
SMC5YOL034W ABP1P15891 592 aaKnown RBP9.22□□□□□ -0.93
SMC5YOL034W LEU3P08638 886 aa9.18□□□□□ -0.94
SMC5YOL034W BRL1P38770 471 aa9.15□□□□□ -0.94
SMC5YOL034W GIN4Q12263 1142 aa9.11□□□□□ -0.95
SMC5YOL034W RLP24Q07915 199 aaKnown RBP9.11□□□□□ -0.95
SMC5YOL034W SWE1P32944 819 aa9.1□□□□□ -0.95
SMC5YOL034W DEF1P35732 738 aaKnown RBP9.1□□□□□ -0.95
SMC5YOL034W PSH1Q12161 406 aa9.09□□□□□ -0.95
SMC5YOL034W RLF2Q12495 606 aa9.08□□□□□ -0.96
SMC5YOL034W HIF1Q12373 385 aa9.05□□□□□ -0.96
SMC5YOL034W NUG1P40010 520 aaKnown RBP9.04□□□□□ -0.96
SMC5YOL034W TOA1P32773 286 aa8.99□□□□□ -0.97
SMC5YOL034W SUB1P54000 292 aaKnown RBP8.99□□□□□ -0.97
SMC5YOL034W RPN1P38764 993 aaKnown RBP8.99□□□□□ -0.97
SMC5YOL034W VPS72Q03388 795 aa8.99□□□□□ -0.97
SMC5YOL034W ATG36P46983 293 aa8.95□□□□□ -0.98
SMC5YOL034W ENV11P53246 860 aa8.95□□□□□ -0.98
SMC5YOL034W YPR148CQ06523 435 aa8.94□□□□□ -0.98
SMC5YOL034W TIF4632P39936 914 aaKnown RBP8.92□□□□□ -0.98
SMC5YOL034W TPO2P53283 614 aa8.92□□□□□ -0.98
SMC5YOL034W ASF1P32447 279 aa8.9□□□□□ -0.98
SMC5YOL034W NHA1Q99271 985 aa8.89□□□□□ -0.99
SMC5YOL034W LAM6Q08001 693 aa8.88□□□□□ -0.99
SMC5YOL034W BRN1P38170 754 aa8.87□□□□□ -0.99
SMC5YOL034W RPS0AP32905 252 aaKnown RBP8.86□□□□□ -0.99
SMC5YOL034W RTS3P53289 263 aa8.86□□□□□ -0.99
SMC5YOL034W YML020WQ03722 664 aa8.86□□□□□ -0.99
SMC5YOL034W SPT16P32558 1035 aaKnown RBP8.85□□□□□ -0.99
SMC5YOL034W PLP2Q12017 286 aa8.85□□□□□ -0.99
SMC5YOL034W SSA1P10591 642 aaKnown RBP8.83□□□□□ -1
SMC5YOL034W SSA2P10592 639 aaKnown RBP8.83□□□□□ -1
SMC5YOL034W FPR3P38911 411 aaKnown RBP8.83□□□□□ -1
SMC5YOL034W TLG1Q03322 224 aa8.83□□□□□ -1
SMC5YOL034W HSP82P02829 709 aaKnown RBP8.81□□□□□ -1
SMC5YOL034W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
SMC5YOL034W MPP10P47083 593 aaKnown RBP8.81□□□□□ -1
SMC5YOL034W BUD21Q08492 214 aaPredicted RBP8.8□□□□□ -1
SMC5YOL034W ISW1P38144 1129 aa8.79□□□□□ -1
SMC5YOL034W NOP53Q12080 455 aaKnown RBP8.79□□□□□ -1
SMC5YOL034W SPT2P06843 333 aaPredicted RBP8.78□□□□□ -1
SMC5YOL034W YJR008WP47085 338 aa8.78□□□□□ -1
SMC5YOL034W OSW7P43611 510 aa8.78□□□□□ -1
SMC5YOL034W RSE1Q04693 1361 aaKnown RBP8.77□□□□□ -1.01
SMC5YOL034W SAS10Q12136 610 aaPredicted RBP8.76□□□□□ -1.01
SMC5YOL034W SSP1P38871 571 aa8.75□□□□□ -1.01
SMC5YOL034W KIP3P53086 805 aaKnown RBP8.75□□□□□ -1.01
SMC5YOL034W NOP8Q08287 484 aaPredicted RBP8.74□□□□□ -1.01
SMC5YOL034W SPT7P35177 1332 aa8.74□□□□□ -1.01
SMC5YOL034W NOP7P53261 605 aaKnown RBP8.73□□□□□ -1.01
SMC5YOL034W ENP1P38333 483 aaKnown RBP8.72□□□□□ -1.01
SMC5YOL034W FAR11P53917 953 aa8.72□□□□□ -1.01
SMC5YOL034W GEF1P37020 779 aa8.69□□□□□ -1.02
SMC5YOL034W YTA7P40340 1379 aa8.68□□□□□ -1.02
SMC5YOL034W AIM21P40563 679 aa8.68□□□□□ -1.02
SMC5YOL034W SSF1P38789 453 aaPredicted RBP8.68□□□□□ -1.02
SMC5YOL034W ZDS1P50111 915 aaKnown RBP8.68□□□□□ -1.02
SMC5YOL034W YMR196WQ04336 1088 aa8.67□□□□□ -1.02
SMC5YOL034W PDR1P12383 1068 aa8.67□□□□□ -1.02
SMC5YOL034W DAL5P15365 543 aa8.67□□□□□ -1.02
SMC5YOL034W TCB2P48231 1178 aa8.67□□□□□ -1.02
SMC5YOL034W SPC42P36094 363 aa8.65□□□□□ -1.02
SMC5YOL034W NAB3P38996 802 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
SMC5YOL034W TAF13P11747 167 aa8.65□□□□□ -1.03
SMC5YOL034W PTP3P40048 928 aa8.65□□□□□ -1.03
SMC5YOL034W RPT2P40327 437 aaKnown RBP8.63□□□□□ -1.03
SMC5YOL034W TY4A-JP47023 414 aa8.62□□□□□ -1.03
SMC5YOL034W GRX3Q03835 250 aa8.61□□□□□ -1.03
SMC5YOL034W NSR1P27476 414 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
SMC5YOL034W BRE1Q07457 700 aaKnown RBP8.6□□□□□ -1.03
SMC5YOL034W RNA1P11745 407 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms