RNA–Protein interactions for RNA: YIR028W

DAL4, Transcript of Allantoin permease, yeast

Gene DAL4, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DAL4	YIR028W	AIM21	P40563	679 aa		7.99	□□□□□ -1.13
DAL4	YIR028W	SPC42	P36094	363 aa		7.97	□□□□□ -1.13
DAL4	YIR028W	HOS4	P40480	1083 aa		7.97	□□□□□ -1.13
DAL4	YIR028W	HSC82	P15108	705 aa	Known RBP	7.97	□□□□□ -1.13
DAL4	YIR028W	DOS2	P54858	310 aa		7.97	□□□□□ -1.13
DAL4	YIR028W	FPR4	Q06205	392 aa	Predicted RBP	7.97	□□□□□ -1.13
DAL4	YIR028W	BRE1	Q07457	700 aa	Known RBP	7.97	□□□□□ -1.13
DAL4	YIR028W	YNL011C	P53980	444 aa		7.96	□□□□□ -1.13
DAL4	YIR028W	CDC11	P32458	415 aa		7.94	□□□□□ -1.14
DAL4	YIR028W	SLX8	P40072	274 aa		7.94	□□□□□ -1.14
DAL4	YIR028W	YSH1	Q06224	779 aa	Predicted RBP	7.94	□□□□□ -1.14
DAL4	YIR028W	SEC20	P28791	383 aa		7.93	□□□□□ -1.14
DAL4	YIR028W	INO80	P53115	1489 aa		7.93	□□□□□ -1.14
DAL4	YIR028W	RAD2	P07276	1031 aa		7.93	□□□□□ -1.14
DAL4	YIR028W	YGR130C	P53278	816 aa		7.93	□□□□□ -1.14
DAL4	YIR028W	NMD2	P38798	1089 aa	Known RBP	7.92	□□□□□ -1.14
DAL4	YIR028W	CKB1	P43639	278 aa		7.91	□□□□□ -1.14
DAL4	YIR028W	PEA2	P40091	420 aa		7.91	□□□□□ -1.14
DAL4	YIR028W	GAL11	P19659	1081 aa		7.9	□□□□□ -1.15
DAL4	YIR028W	SPC110	P32380	944 aa		7.89	□□□□□ -1.15
DAL4	YIR028W	MET10	P39692	1035 aa		7.89	□□□□□ -1.15
DAL4	YIR028W	PTP3	P40048	928 aa		7.89	□□□□□ -1.15
DAL4	YIR028W	VPS4	P52917	437 aa		7.88	□□□□□ -1.15
DAL4	YIR028W	MEH1	Q02205	184 aa		7.88	□□□□□ -1.15
DAL4	YIR028W	GIR2	Q03768	265 aa	Predicted RBP	7.88	□□□□□ -1.15
DAL4	YIR028W	PSK2	Q08217	1101 aa		7.86	□□□□□ -1.15
DAL4	YIR028W	CFT2	Q12102	859 aa	Predicted RBP	7.86	□□□□□ -1.15
DAL4	YIR028W	MCM1	P11746	286 aa		7.85	□□□□□ -1.15
DAL4	YIR028W	YDR341C	Q05506	607 aa	Known RBP	7.84	□□□□□ -1.15
DAL4	YIR028W	PET111	P08468	800 aa		7.84	□□□□□ -1.16
DAL4	YIR028W	SPT21	P35209	758 aa		7.84	□□□□□ -1.16
DAL4	YIR028W	RCF1	Q03713	159 aa		7.84	□□□□□ -1.16
DAL4	YIR028W	PKH1	Q03407	766 aa		7.83	□□□□□ -1.16
DAL4	YIR028W	MPE1	P35728	441 aa	Known RBP	7.82	□□□□□ -1.16
DAL4	YIR028W	DJP1	P40564	432 aa		7.82	□□□□□ -1.16
DAL4	YIR028W	SEC9	P40357	651 aa		7.82	□□□□□ -1.16
DAL4	YIR028W	ETT1	Q08421	412 aa	Known RBP	7.82	□□□□□ -1.16
DAL4	YIR028W	RPA135	P22138	1203 aa	Known RBP	7.81	□□□□□ -1.16
DAL4	YIR028W	NNF2	P53253	936 aa		7.81	□□□□□ -1.16
DAL4	YIR028W	NST1	P53935	1240 aa		7.81	□□□□□ -1.16
DAL4	YIR028W	SYH1	Q02875	849 aa	Known RBP	7.81	□□□□□ -1.16
DAL4	YIR028W	UBX5	Q06682	500 aa		7.81	□□□□□ -1.16
DAL4	YIR028W	SSA4	P22202	642 aa	Known RBP	7.8	□□□□□ -1.16
DAL4	YIR028W	MTR4	P47047	1073 aa	Known RBP	7.8	□□□□□ -1.16
DAL4	YIR028W	APL5	Q08951	932 aa	Known RBP	7.8	□□□□□ -1.16
DAL4	YIR028W	RAD51	P25454	400 aa		7.8	□□□□□ -1.16
DAL4	YIR028W	PAM1	P37304	830 aa	Known RBP	7.8	□□□□□ -1.16
DAL4	YIR028W	SEC27	P41811	889 aa	Known RBP	7.78	□□□□□ -1.16
DAL4	YIR028W	TOM20	P35180	183 aa		7.78	□□□□□ -1.16
DAL4	YIR028W	MRX12	P47084	519 aa		7.78	□□□□□ -1.16
DAL4	YIR028W	MFT1	P33441	392 aa	Known RBP	7.77	□□□□□ -1.17
DAL4	YIR028W	GDE1	Q02979	1223 aa		7.77	□□□□□ -1.17
DAL4	YIR028W	ERP2	P39704	215 aa		7.76	□□□□□ -1.17
DAL4	YIR028W	TAF1	P46677	1066 aa		7.76	□□□□□ -1.17
DAL4	YIR028W	YGL081W	P53156	320 aa		7.76	□□□□□ -1.17
DAL4	YIR028W	YAF9	P53930	226 aa		7.76	□□□□□ -1.17
DAL4	YIR028W	YLR257W	Q06146	321 aa	Known RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	CLF1	Q12309	687 aa	Predicted RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	NMD3	P38861	518 aa	Known RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	PMC1	P38929	1173 aa	Predicted RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	NOC2	P39744	710 aa	Known RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	POL5	P39985	1022 aa	Known RBP	7.76	□□□□□ -1.17
DAL4	YIR028W	BLI1	P35727	113 aa		7.75	□□□□□ -1.17
DAL4	YIR028W	LEM3	P42838	414 aa		7.75	□□□□□ -1.17
DAL4	YIR028W	TY1B-A	O13527	1196 aa	Known RBP	7.74	□□□□□ -1.17
DAL4	YIR028W	VPS27	P40343	622 aa	Known RBP	7.74	□□□□□ -1.17
DAL4	YIR028W	CEF1	Q03654	590 aa	Predicted RBP	7.74	□□□□□ -1.17
DAL4	YIR028W	NPR3	P38742	1146 aa		7.74	□□□□□ -1.17
DAL4	YIR028W	OPI1	P21957	404 aa		7.73	□□□□□ -1.17
DAL4	YIR028W	BOI2	P39969	1040 aa		7.73	□□□□□ -1.17
DAL4	YIR028W	IES1	P43579	692 aa		7.73	□□□□□ -1.17
DAL4	YIR028W	YDL121C	Q07541	149 aa		7.73	□□□□□ -1.17
DAL4	YIR028W	YLL054C	Q12244	843 aa		7.73	□□□□□ -1.17
DAL4	YIR028W	TMA64	Q04600	565 aa	Known RBP	7.72	□□□□□ -1.17
DAL4	YIR028W	OCA5	P38738	679 aa		7.72	□□□□□ -1.17
DAL4	YIR028W	HEL2	Q05580	639 aa	Known RBP	7.72	□□□□□ -1.17
DAL4	YIR028W	VMA4	P22203	233 aa	Known RBP	7.71	□□□□□ -1.18
DAL4	YIR028W	SAP190	P36123	1033 aa		7.71	□□□□□ -1.18
DAL4	YIR028W	IMH1	Q06704	911 aa	Known RBP	7.71	□□□□□ -1.18
DAL4	YIR028W	PUS1	Q12211	544 aa	Known RBP	7.71	□□□□□ -1.18
DAL4	YIR028W	RRP14	P36080	434 aa	Known RBP	7.7	□□□□□ -1.18
DAL4	YIR028W	AIM20	P40451	204 aa		7.7	□□□□□ -1.18
DAL4	YIR028W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	7.7	□□□□□ -1.18	not detected
DAL4	YIR028W	PIM1	P36775	1133 aa		7.7	□□□□□ -1.18
DAL4	YIR028W	MSH4	P40965	878 aa	Predicted RBP	7.69	□□□□□ -1.18
DAL4	YIR028W	HSP42	Q12329	375 aa		7.69	□□□□□ -1.18
DAL4	YIR028W	TY4B-P	A0A0B7P3V8	1104 aa		7.68	□□□□□ -1.18
DAL4	YIR028W	TAN1	P53072	289 aa	Predicted RBP	7.68	□□□□□ -1.18
DAL4	YIR028W	HOS2	P53096	452 aa	Predicted RBP	7.68	□□□□□ -1.18
DAL4	YIR028W	ERP4	Q12450	207 aa		7.68	□□□□□ -1.18
DAL4	YIR028W	TY4A-H	Q6Q5P6	413 aa		7.68	□□□□□ -1.18
DAL4	YIR028W	SLD2	P34252	453 aa		7.68	□□□□□ -1.18
DAL4	YIR028W	TPM2	P40414	161 aa		7.68	□□□□□ -1.18
DAL4	YIR028W	PWP2	P25635	923 aa	Known RBP	7.67	□□□□□ -1.18
DAL4	YIR028W	PRP43	P53131	767 aa	Known RBP	7.67	□□□□□ -1.18
DAL4	YIR028W	YPR172W	Q06608	200 aa		7.67	□□□□□ -1.18
DAL4	YIR028W	FAF1	P40546	346 aa	Predicted RBP	7.66	□□□□□ -1.18
DAL4	YIR028W	VID30	P53076	958 aa		7.66	□□□□□ -1.18
DAL4	YIR028W	ESF2	P53743	316 aa	Known RBP	7.66	□□□□□ -1.18
DAL4	YIR028W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	7.66	□□□□□ -1.18	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms