RNA–Protein interactions for RNA: YMR238W

DFG5, Transcript of Putative mannosidase, yeast

Gene DFG5, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DFG5	YMR238W	PRP22	P24384	1145 aa	Known RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	RRP43	P25359	394 aa	Predicted RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	STO1	P34160	861 aa	Known RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	SHP1	P34223	423 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	COY1	P34237	679 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	SQT1	P35184	431 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	SPT8	P38915	602 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	CCC2	P38995	1004 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	VFA1	P40080	203 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	NDE1	P40215	560 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	ULP2	P40537	1034 aa	Predicted RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	TOS3	P43637	560 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	YGL039W	P53183	348 aa	Known RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
DFG5	YMR238W	DUS3	Q06053	668 aa	Known RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	SPH1	Q06160	661 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	DBP9	Q06218	594 aa	Known RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	ARV1	Q06541	321 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	GUD1	Q07729	489 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	TCO89	Q08921	799 aa		5.79	□□□□□ -1.48
DFG5	YMR238W	CWC2	Q12046	339 aa	Predicted RBP	5.79	□□□□□ -1.48
DFG5	YMR238W	MOT1	P32333	1867 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	PER1	P25625	357 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	RPC82	P32349	654 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	OCT1	P35999	772 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	BYE1	P36106	594 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	YHR020W	P38708	688 aa	Known RBP	5.78	□□□□□ -1.48
DFG5	YMR238W	PEX28	P38848	579 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	PXA1	P41909	870 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	NBP1	P52919	319 aa	Predicted RBP	5.78	□□□□□ -1.48
DFG5	YMR238W	ERG5	P54781	538 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	ORC3	P54790	616 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	PTA1	Q01329	785 aa	Predicted RBP	5.78	□□□□□ -1.48
DFG5	YMR238W	HOS3	Q02959	697 aa	Known RBP	5.78	□□□□□ -1.48
DFG5	YMR238W	SND1	Q04007	877 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	YCG1	Q06680	1035 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	CDA2	Q06703	312 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	ATG9	Q12142	997 aa		5.78	□□□□□ -1.48
DFG5	YMR238W	LAA1	P39526	2014 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	HMG1	P12683	1054 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	CLN3	P13365	580 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	TSA1	P34760	196 aa	Known RBP	5.77	□□□□□ -1.49
DFG5	YMR238W	EFM5	P53200	248 aa	Known RBP	5.77	□□□□□ -1.49
DFG5	YMR238W	DSL1	P53847	754 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	ALF1	P53904	254 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	UME1	Q03010	460 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	SNZ1	Q03148	297 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	VPS38	Q05919	439 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	RSA3	Q05942	220 aa	Known RBP	5.77	□□□□□ -1.49
DFG5	YMR238W	PSR1	Q07800	427 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	RRP6	Q12149	733 aa	Known RBP	5.77	□□□□□ -1.49
DFG5	YMR238W	RKM4	Q12504	494 aa		5.77	□□□□□ -1.49
DFG5	YMR238W	PGK1	P00560	416 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	RPB2	P08518	1224 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	SRD1	P09007	221 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	HEM13	P11353	328 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	SEC23	P15303	768 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	TUP1	P16649	713 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	SPO12	P17123	173 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	DAL7	P21826	554 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	MRPL25	P23369	157 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	RPC53	P25441	422 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	UTR4	P32626	227 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	YEL1	P34225	687 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	MCR1	P36060	302 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	EFM2	P38347	419 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	FAA3	P39002	694 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	IES5	P40060	125 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	SHQ1	P40486	507 aa	Predicted RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	SDS3	P40505	327 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	FIS1	P40515	155 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	FYV8	P46949	817 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	YJR107W	P47145	328 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	TAD1	P53065	400 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	HOP2	P53187	214 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	JJJ1	P53863	590 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	ARK1	P53974	638 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	SEC5	P89102	971 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	YLR287C	Q05881	355 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	SPO75	Q07798	868 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	NEW1	Q08972	1196 aa	Known RBP	5.76	□□□□□ -1.49
DFG5	YMR238W	YLR125W	Q12138	136 aa		5.76	□□□□□ -1.49
DFG5	YMR238W	RIF1	P29539	1916 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	PPR1	P07272	904 aa	Predicted RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	RPC40	P07703	335 aa	Known RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	PHO8	P11491	566 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	SAM35	P14693	329 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	PET123	P17558	318 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	NTG1	P31378	399 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	VMA8	P32610	256 aa	Known RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	RDH54	P38086	958 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	ATG14	P38270	344 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	YHL012W	P38709	493 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	PEX18	P38855	283 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	SWD1	P39706	426 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	VAB2	P40003	282 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	YER034W	P40022	185 aa	Known RBP	5.75	□□□□□ -1.49
DFG5	YMR238W	YIL089W	P40500	205 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	LAM5	P43560	674 aa		5.75	□□□□□ -1.49
DFG5	YMR238W	RRT6	P53117	311 aa	Predicted RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms