Protein–RNA interactions for Protein: P29539

RIF1, Telomere length regulator protein RIF1, yeastyeast

Predictions only

Length 1,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIF1P29539 YML009W-BYML009W-B 477 nt22.62■■□□□ 1.21
RIF1P29539 NSR1YGR159C 1245 nt21.66■■□□□ 1.06
RIF1P29539 NOP1YDL014W 984 nt21.55■■□□□ 1.04
RIF1P29539 YKL036CYKL036C 393 nt20.6■□□□□ 0.89
RIF1P29539 SRX1YKL086W 384 nt19.35■□□□□ 0.69
RIF1P29539 MDJ1YFL016C 1536 nt19.31■□□□□ 0.68
RIF1P29539 Q0297Q0297 156 nt19.26■□□□□ 0.67
RIF1P29539 YJL027CYJL027C 417 nt19.21■□□□□ 0.67
RIF1P29539 SCS3YGL126W 1143 nt19.1■□□□□ 0.65
RIF1P29539 YCR051WYCR051W 669 nt18.27■□□□□ 0.52
RIF1P29539 YOL085CYOL085C 342 nt17.59■□□□□ 0.41
RIF1P29539 PKP1YIL042C 1185 nt17.58■□□□□ 0.4
RIF1P29539 TRN1tP(UGG)A 72 nt17.29■□□□□ 0.36
RIF1P29539 SUF9tP(UGG)F 72 nt17.29■□□□□ 0.36
RIF1P29539 SUF8tP(UGG)H 72 nt17.29■□□□□ 0.36
RIF1P29539 tP(UGG)LtP(UGG)L 72 nt17.29■□□□□ 0.36
RIF1P29539 SUF7tP(UGG)M 72 nt17.29■□□□□ 0.36
RIF1P29539 tP(UGG)N1tP(UGG)N1 72 nt17.29■□□□□ 0.36
RIF1P29539 tP(UGG)N2tP(UGG)N2 72 nt17.29■□□□□ 0.36
RIF1P29539 tP(UGG)O1tP(UGG)O1 72 nt17.29■□□□□ 0.36
RIF1P29539 SUF11tP(UGG)O2 72 nt17.29■□□□□ 0.36
RIF1P29539 DBP2YNL112W 1641 nt17.19■□□□□ 0.34
RIF1P29539 RPP1BYDL130W 321 nt17.18■□□□□ 0.34
RIF1P29539 SCJ1YMR214W 1134 nt17.08■□□□□ 0.33
RIF1P29539 CCC1YLR220W 969 nt16.92■□□□□ 0.3
RIF1P29539 ATS1YAL020C 1002 nt16.89■□□□□ 0.29
RIF1P29539 PET122YER153C 765 nt16.59■□□□□ 0.25
RIF1P29539 SCR1SCR1 522 nt16.41■□□□□ 0.22
RIF1P29539 tP(UGG)O3tP(UGG)O3 72 nt16.31■□□□□ 0.2
RIF1P29539 RVS167YDR388W 1449 nt16.12■□□□□ 0.17
RIF1P29539 YBR190WYBR190W 312 nt16.06■□□□□ 0.16
RIF1P29539 RRN5YLR141W 1092 nt16■□□□□ 0.15
RIF1P29539 RSB1YOR049C 1065 nt15.97■□□□□ 0.15
RIF1P29539 RTC3YHR087W 336 nt15.72■□□□□ 0.11
RIF1P29539 YER088W-BYER088W-B 147 nt15.7■□□□□ 0.1
RIF1P29539 SHR5YOL110W 714 nt15.66■□□□□ 0.1
RIF1P29539 YDJ1YNL064C 1230 nt15.62■□□□□ 0.09
RIF1P29539 PST2YDR032C 597 nt15.56■□□□□ 0.08
RIF1P29539 GAR1YHR089C 618 nt15.35■□□□□ 0.05
RIF1P29539 YKL097CYKL097C 411 nt15.34■□□□□ 0.05
RIF1P29539 DEP1YAL013W 1218 nt15.27■□□□□ 0.04
RIF1P29539 URN1YPR152C 1398 nt15.13■□□□□ 0.01
RIF1P29539 SHU1YHL006C 453 nt15.04■□□□□ -0
RIF1P29539 YAL037C-BYAL037C-B 975 nt14.86□□□□□ -0.03
RIF1P29539 YOR139CYOR139C 393 nt14.77□□□□□ -0.04
RIF1P29539 TIR1YER011W 765 nt14.76□□□□□ -0.05
RIF1P29539 YNL208WYNL208W 600 nt14.74□□□□□ -0.05
RIF1P29539 RPN10YHR200W 807 nt14.74□□□□□ -0.05
RIF1P29539 OPI9YLR338W 858 nt14.67□□□□□ -0.06
RIF1P29539 SAH1YER043C 1350 nt14.62□□□□□ -0.07
RIF1P29539 SRB2YHR041C 633 nt14.61□□□□□ -0.07
RIF1P29539 SSA1YAL005C 1929 nt14.58□□□□□ -0.08
RIF1P29539 PUT4YOR348C 1884 nt14.58□□□□□ -0.08
RIF1P29539 MNP1YGL068W 585 nt14.51□□□□□ -0.09
RIF1P29539 ARE1YCR048W 1833 nt14.47□□□□□ -0.09
RIF1P29539 NPL3YDR432W 1245 nt14.46□□□□□ -0.09
RIF1P29539 YJR120WYJR120W 351 nt14.45□□□□□ -0.1
RIF1P29539 YHR049C-AYHR049C-A 297 nt14.41□□□□□ -0.1
RIF1P29539 WWM1YFL010C 636 nt14.41□□□□□ -0.1
RIF1P29539 YJR018WYJR018W 363 nt14.37□□□□□ -0.11
RIF1P29539 HOM6YJR139C 1080 nt14.3□□□□□ -0.12
RIF1P29539 YGR021WYGR021W 873 nt14.25□□□□□ -0.13
RIF1P29539 YOL037CYOL037C 354 nt14.23□□□□□ -0.13
RIF1P29539 PUN1YLR414C 792 nt14.22□□□□□ -0.13
RIF1P29539 POA1YBR022W 534 nt14.15□□□□□ -0.14
RIF1P29539 SSA3YBL075C 1950 nt14.09□□□□□ -0.15
RIF1P29539 RPP2BYDR382W 333 nt14.05□□□□□ -0.16
RIF1P29539 YFL021C-AYFL021C-A 855 nt14.03□□□□□ -0.16
RIF1P29539 BUD23YCR047C 828 nt13.98□□□□□ -0.17
RIF1P29539 BDH2YAL061W 1254 nt13.98□□□□□ -0.17
RIF1P29539 BSC6YOL137W 1494 nt13.97□□□□□ -0.17
RIF1P29539 RKM5YLR137W 1104 nt13.96□□□□□ -0.18
RIF1P29539 PTC2YER089C 1395 nt13.94□□□□□ -0.18
RIF1P29539 FIS1YIL065C 468 nt13.85□□□□□ -0.19
RIF1P29539 tM(CAU)CtM(CAU)C 72 nt13.84□□□□□ -0.19
RIF1P29539 IMT4tM(CAU)E 72 nt13.84□□□□□ -0.19
RIF1P29539 IMT3tM(CAU)J3 72 nt13.84□□□□□ -0.19
RIF1P29539 IMT1tM(CAU)O1 72 nt13.84□□□□□ -0.19
RIF1P29539 IMT2tM(CAU)P 72 nt13.84□□□□□ -0.19
RIF1P29539 PUS2YGL063W 1113 nt13.78□□□□□ -0.2
RIF1P29539 NAB2YGL122C 1578 nt13.77□□□□□ -0.2
RIF1P29539 YBL100CYBL100C 315 nt13.76□□□□□ -0.21
RIF1P29539 YLR281CYLR281C 468 nt13.72□□□□□ -0.21
RIF1P29539 PHO4YFR034C 939 nt13.71□□□□□ -0.21
RIF1P29539 WHI5YOR083W 888 nt13.71□□□□□ -0.21
RIF1P29539 YLR236CYLR236C 324 nt13.6□□□□□ -0.23
RIF1P29539 MOT3YMR070W 1473 nt13.6□□□□□ -0.23
RIF1P29539 FPR4YLR449W 1179 nt13.58□□□□□ -0.24
RIF1P29539 LSM3YLR438C-A 270 nt13.56□□□□□ -0.24
RIF1P29539 DAL1YIR027C 1383 nt13.55□□□□□ -0.24
RIF1P29539 INM2YDR287W 879 nt13.54□□□□□ -0.24
RIF1P29539 YLR154C-GYLR154C-G 150 nt13.52□□□□□ -0.24
RIF1P29539 TRM9YML014W 840 nt13.52□□□□□ -0.25
RIF1P29539 FMP45YDL222C 930 nt13.51□□□□□ -0.25
RIF1P29539 YPR011CYPR011C 981 nt13.49□□□□□ -0.25
RIF1P29539 DSK2YMR276W 1122 nt13.46□□□□□ -0.25
RIF1P29539 IMP2'YIL154C 1041 nt13.44□□□□□ -0.26
RIF1P29539 FUN26YAL022C 1554 nt13.4□□□□□ -0.26
RIF1P29539 CCT6YDR188W 1641 nt13.39□□□□□ -0.27
RIF1P29539 LPX1YOR084W 1164 nt13.33□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms