Protein–RNA interactions for Protein: P39706

SWD1, COMPASS component SWD1, yeastyeast

Predictions only

Length 426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD1P39706 NSR1YGR159C 1245 nt19.12■□□□□ 0.65
SWD1P39706 YML009W-BYML009W-B 477 nt18.84■□□□□ 0.61
SWD1P39706 NOP1YDL014W 984 nt18.09■□□□□ 0.49
SWD1P39706 MDJ1YFL016C 1536 nt17.42■□□□□ 0.38
SWD1P39706 YKL036CYKL036C 393 nt16.34■□□□□ 0.21
SWD1P39706 YJL027CYJL027C 417 nt15.97■□□□□ 0.15
SWD1P39706 SRX1YKL086W 384 nt15.87■□□□□ 0.13
SWD1P39706 Q0297Q0297 156 nt15.78■□□□□ 0.12
SWD1P39706 DBP2YNL112W 1641 nt15.31■□□□□ 0.04
SWD1P39706 YCR051WYCR051W 669 nt14.99□□□□□ -0.01
SWD1P39706 YBR190WYBR190W 312 nt14.94□□□□□ -0.02
SWD1P39706 SCS3YGL126W 1143 nt14.68□□□□□ -0.06
SWD1P39706 TRN1tP(UGG)A 72 nt14.63□□□□□ -0.07
SWD1P39706 SUF9tP(UGG)F 72 nt14.63□□□□□ -0.07
SWD1P39706 SUF8tP(UGG)H 72 nt14.63□□□□□ -0.07
SWD1P39706 tP(UGG)LtP(UGG)L 72 nt14.63□□□□□ -0.07
SWD1P39706 SUF7tP(UGG)M 72 nt14.63□□□□□ -0.07
SWD1P39706 tP(UGG)N1tP(UGG)N1 72 nt14.63□□□□□ -0.07
SWD1P39706 tP(UGG)N2tP(UGG)N2 72 nt14.63□□□□□ -0.07
SWD1P39706 tP(UGG)O1tP(UGG)O1 72 nt14.63□□□□□ -0.07
SWD1P39706 SUF11tP(UGG)O2 72 nt14.63□□□□□ -0.07
SWD1P39706 RTC3YHR087W 336 nt14.53□□□□□ -0.08
SWD1P39706 CCC1YLR220W 969 nt14.44□□□□□ -0.1
SWD1P39706 SSA3YBL075C 1950 nt14.34□□□□□ -0.11
SWD1P39706 YOL085CYOL085C 342 nt14.21□□□□□ -0.13
SWD1P39706 RPP1BYDL130W 321 nt14.14□□□□□ -0.15
SWD1P39706 RVS167YDR388W 1449 nt14.12□□□□□ -0.15
SWD1P39706 SCJ1YMR214W 1134 nt14.1□□□□□ -0.15
SWD1P39706 PKP1YIL042C 1185 nt14.04□□□□□ -0.16
SWD1P39706 PUT4YOR348C 1884 nt13.97□□□□□ -0.17
SWD1P39706 tP(UGG)O3tP(UGG)O3 72 nt13.69□□□□□ -0.22
SWD1P39706 PET122YER153C 765 nt13.59□□□□□ -0.23
SWD1P39706 SHR5YOL110W 714 nt13.59□□□□□ -0.23
SWD1P39706 ARE1YCR048W 1833 nt13.58□□□□□ -0.24
SWD1P39706 URN1YPR152C 1398 nt13.48□□□□□ -0.25
SWD1P39706 POA1YBR022W 534 nt13.46□□□□□ -0.25
SWD1P39706 SAH1YER043C 1350 nt13.44□□□□□ -0.26
SWD1P39706 OPI9YLR338W 858 nt13.39□□□□□ -0.27
SWD1P39706 DEP1YAL013W 1218 nt13.37□□□□□ -0.27
SWD1P39706 YHR049C-AYHR049C-A 297 nt13.34□□□□□ -0.27
SWD1P39706 BSC6YOL137W 1494 nt13.25□□□□□ -0.29
SWD1P39706 YDJ1YNL064C 1230 nt13.24□□□□□ -0.29
SWD1P39706 SCR1SCR1 522 nt13.23□□□□□ -0.29
SWD1P39706 RRN5YLR141W 1092 nt13.15□□□□□ -0.3
SWD1P39706 RPN10YHR200W 807 nt13.11□□□□□ -0.31
SWD1P39706 SPT5YML010W 3192 nt13.1□□□□□ -0.31
SWD1P39706 YNL208WYNL208W 600 nt13.08□□□□□ -0.32
SWD1P39706 Q0182Q0182 405 nt13.07□□□□□ -0.32
SWD1P39706 ATS1YAL020C 1002 nt13.01□□□□□ -0.33
SWD1P39706 GAR1YHR089C 618 nt13□□□□□ -0.33
SWD1P39706 BUD23YCR047C 828 nt12.97□□□□□ -0.33
SWD1P39706 PUN1YLR414C 792 nt12.96□□□□□ -0.33
SWD1P39706 PTC2YER089C 1395 nt12.92□□□□□ -0.34
SWD1P39706 YER088W-BYER088W-B 147 nt12.89□□□□□ -0.35
SWD1P39706 YJR018WYJR018W 363 nt12.83□□□□□ -0.36
SWD1P39706 NAB2YGL122C 1578 nt12.79□□□□□ -0.36
SWD1P39706 SSA4YER103W 1929 nt12.74□□□□□ -0.37
SWD1P39706 RSB1YOR049C 1065 nt12.69□□□□□ -0.38
SWD1P39706 YJR120WYJR120W 351 nt12.66□□□□□ -0.38
SWD1P39706 FIS1YIL065C 468 nt12.61□□□□□ -0.39
SWD1P39706 SSA1YAL005C 1929 nt12.6□□□□□ -0.39
SWD1P39706 TIR1YER011W 765 nt12.6□□□□□ -0.39
SWD1P39706 MOT3YMR070W 1473 nt12.59□□□□□ -0.39
SWD1P39706 FPS1YLL043W 2010 nt12.57□□□□□ -0.4
SWD1P39706 DAL1YIR027C 1383 nt12.54□□□□□ -0.4
SWD1P39706 NVJ2YPR091C 2313 nt12.53□□□□□ -0.4
SWD1P39706 MEP2YNL142W 1500 nt12.48□□□□□ -0.41
SWD1P39706 FPR4YLR449W 1179 nt12.46□□□□□ -0.41
SWD1P39706 PHO4YFR034C 939 nt12.44□□□□□ -0.42
SWD1P39706 INM2YDR287W 879 nt12.41□□□□□ -0.42
SWD1P39706 PAC11YDR488C 1602 nt12.4□□□□□ -0.42
SWD1P39706 RPP2BYDR382W 333 nt12.39□□□□□ -0.43
SWD1P39706 SRB2YHR041C 633 nt12.37□□□□□ -0.43
SWD1P39706 YPS1YLR120C 1710 nt12.37□□□□□ -0.43
SWD1P39706 BDF1YLR399C 2061 nt12.34□□□□□ -0.43
SWD1P39706 DCW1YKL046C 1350 nt12.31□□□□□ -0.44
SWD1P39706 YBL100CYBL100C 315 nt12.23□□□□□ -0.45
SWD1P39706 YDR095CYDR095C 411 nt12.22□□□□□ -0.45
SWD1P39706 YHR165W-AYHR165W-A 312 nt12.2□□□□□ -0.46
SWD1P39706 PST2YDR032C 597 nt12.16□□□□□ -0.46
SWD1P39706 TAT1YBR069C 1860 nt12.15□□□□□ -0.46
SWD1P39706 BDH2YAL061W 1254 nt12.14□□□□□ -0.47
SWD1P39706 EMI2YDR516C 1503 nt12.1□□□□□ -0.47
SWD1P39706 FUN26YAL022C 1554 nt12.09□□□□□ -0.47
SWD1P39706 YBR220CYBR220C 1683 nt12.06□□□□□ -0.48
SWD1P39706 PTP1YDL230W 1008 nt12.05□□□□□ -0.48
SWD1P39706 CAC2YML102W 1407 nt12.03□□□□□ -0.48
SWD1P39706 WWM1YFL010C 636 nt12□□□□□ -0.49
SWD1P39706 YDL221WYDL221W 552 nt11.98□□□□□ -0.49
SWD1P39706 RPP2AYOL039W 321 nt11.97□□□□□ -0.49
SWD1P39706 TRM9YML014W 840 nt11.96□□□□□ -0.49
SWD1P39706 YMR090WYMR090W 684 nt11.96□□□□□ -0.49
SWD1P39706 ALF1YNL148C 765 nt11.94□□□□□ -0.5
SWD1P39706 SDH1YKL148C 1923 nt11.92□□□□□ -0.5
SWD1P39706 CCT6YDR188W 1641 nt11.9□□□□□ -0.5
SWD1P39706 LSM3YLR438C-A 270 nt11.89□□□□□ -0.51
SWD1P39706 SIS1YNL007C 1059 nt11.87□□□□□ -0.51
SWD1P39706 IRC15YPL017C 1500 nt11.85□□□□□ -0.51
SWD1P39706 YJL225CYJL225C 5277 nt11.8□□□□□ -0.52
SWD1P39706 SCC4YER147C 1875 nt11.78□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 8 ms