Protein–RNA interactions for Protein: P07703

RPC40, DNA-directed RNA polymerases I and III subunit RPAC1, yeastyeast

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC40P07703 NSR1YGR159C 1245 nt18.72■□□□□ 0.59
RPC40P07703 YML009W-BYML009W-B 477 nt18.54■□□□□ 0.56
RPC40P07703 NOP1YDL014W 984 nt17.83■□□□□ 0.44
RPC40P07703 MDJ1YFL016C 1536 nt17.01■□□□□ 0.31
RPC40P07703 YKL036CYKL036C 393 nt16.18■□□□□ 0.18
RPC40P07703 SRX1YKL086W 384 nt15.63■□□□□ 0.09
RPC40P07703 YJL027CYJL027C 417 nt15.59■□□□□ 0.09
RPC40P07703 Q0297Q0297 156 nt15.56■□□□□ 0.08
RPC40P07703 DBP2YNL112W 1641 nt14.95□□□□□ -0.02
RPC40P07703 YCR051WYCR051W 669 nt14.79□□□□□ -0.04
RPC40P07703 SCS3YGL126W 1143 nt14.59□□□□□ -0.07
RPC40P07703 YBR190WYBR190W 312 nt14.54□□□□□ -0.08
RPC40P07703 TRN1tP(UGG)A 72 nt14.36□□□□□ -0.11
RPC40P07703 SUF9tP(UGG)F 72 nt14.36□□□□□ -0.11
RPC40P07703 SUF8tP(UGG)H 72 nt14.36□□□□□ -0.11
RPC40P07703 tP(UGG)LtP(UGG)L 72 nt14.36□□□□□ -0.11
RPC40P07703 SUF7tP(UGG)M 72 nt14.36□□□□□ -0.11
RPC40P07703 tP(UGG)N1tP(UGG)N1 72 nt14.36□□□□□ -0.11
RPC40P07703 tP(UGG)N2tP(UGG)N2 72 nt14.36□□□□□ -0.11
RPC40P07703 tP(UGG)O1tP(UGG)O1 72 nt14.36□□□□□ -0.11
RPC40P07703 SUF11tP(UGG)O2 72 nt14.36□□□□□ -0.11
RPC40P07703 CCC1YLR220W 969 nt14.2□□□□□ -0.14
RPC40P07703 RTC3YHR087W 336 nt14.17□□□□□ -0.14
RPC40P07703 YOL085CYOL085C 342 nt14.07□□□□□ -0.16
RPC40P07703 RPP1BYDL130W 321 nt13.96□□□□□ -0.17
RPC40P07703 PKP1YIL042C 1185 nt13.91□□□□□ -0.18
RPC40P07703 SCJ1YMR214W 1134 nt13.84□□□□□ -0.19
RPC40P07703 RVS167YDR388W 1449 nt13.82□□□□□ -0.2
RPC40P07703 PUT4YOR348C 1884 nt13.53□□□□□ -0.24
RPC40P07703 tP(UGG)O3tP(UGG)O3 72 nt13.47□□□□□ -0.25
RPC40P07703 SSA3YBL075C 1950 nt13.47□□□□□ -0.25
RPC40P07703 PET122YER153C 765 nt13.42□□□□□ -0.26
RPC40P07703 SHR5YOL110W 714 nt13.32□□□□□ -0.28
RPC40P07703 ARE1YCR048W 1833 nt13.19□□□□□ -0.3
RPC40P07703 URN1YPR152C 1398 nt13.18□□□□□ -0.3
RPC40P07703 DEP1YAL013W 1218 nt13.1□□□□□ -0.31
RPC40P07703 SAH1YER043C 1350 nt13.09□□□□□ -0.31
RPC40P07703 SCR1SCR1 522 nt13.07□□□□□ -0.32
RPC40P07703 POA1YBR022W 534 nt13.06□□□□□ -0.32
RPC40P07703 OPI9YLR338W 858 nt13.05□□□□□ -0.32
RPC40P07703 YDJ1YNL064C 1230 nt13.01□□□□□ -0.33
RPC40P07703 YHR049C-AYHR049C-A 297 nt12.98□□□□□ -0.33
RPC40P07703 RRN5YLR141W 1092 nt12.98□□□□□ -0.33
RPC40P07703 ATS1YAL020C 1002 nt12.94□□□□□ -0.34
RPC40P07703 BSC6YOL137W 1494 nt12.85□□□□□ -0.35
RPC40P07703 RPN10YHR200W 807 nt12.82□□□□□ -0.36
RPC40P07703 YNL208WYNL208W 600 nt12.8□□□□□ -0.36
RPC40P07703 GAR1YHR089C 618 nt12.79□□□□□ -0.36
RPC40P07703 YER088W-BYER088W-B 147 nt12.73□□□□□ -0.37
RPC40P07703 Q0182Q0182 405 nt12.68□□□□□ -0.38
RPC40P07703 PUN1YLR414C 792 nt12.63□□□□□ -0.39
RPC40P07703 BUD23YCR047C 828 nt12.62□□□□□ -0.39
RPC40P07703 SPT5YML010W 3192 nt12.6□□□□□ -0.39
RPC40P07703 PTC2YER089C 1395 nt12.58□□□□□ -0.4
RPC40P07703 RSB1YOR049C 1065 nt12.57□□□□□ -0.4
RPC40P07703 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
RPC40P07703 NAB2YGL122C 1578 nt12.43□□□□□ -0.42
RPC40P07703 YJR120WYJR120W 351 nt12.39□□□□□ -0.43
RPC40P07703 TIR1YER011W 765 nt12.38□□□□□ -0.43
RPC40P07703 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
RPC40P07703 FIS1YIL065C 468 nt12.3□□□□□ -0.44
RPC40P07703 SSA4YER103W 1929 nt12.23□□□□□ -0.45
RPC40P07703 DAL1YIR027C 1383 nt12.21□□□□□ -0.45
RPC40P07703 FPR4YLR449W 1179 nt12.17□□□□□ -0.46
RPC40P07703 SRB2YHR041C 633 nt12.16□□□□□ -0.46
RPC40P07703 RPP2BYDR382W 333 nt12.13□□□□□ -0.47
RPC40P07703 PHO4YFR034C 939 nt12.13□□□□□ -0.47
RPC40P07703 INM2YDR287W 879 nt12.1□□□□□ -0.47
RPC40P07703 MEP2YNL142W 1500 nt12.09□□□□□ -0.47
RPC40P07703 PST2YDR032C 597 nt12.07□□□□□ -0.48
RPC40P07703 YPS1YLR120C 1710 nt12.02□□□□□ -0.49
RPC40P07703 YBL100CYBL100C 315 nt11.97□□□□□ -0.49
RPC40P07703 DCW1YKL046C 1350 nt11.93□□□□□ -0.5
RPC40P07703 YDR095CYDR095C 411 nt11.89□□□□□ -0.51
RPC40P07703 BDH2YAL061W 1254 nt11.89□□□□□ -0.51
RPC40P07703 FPS1YLL043W 2010 nt11.87□□□□□ -0.51
RPC40P07703 YHR165W-AYHR165W-A 312 nt11.87□□□□□ -0.51
RPC40P07703 BDF1YLR399C 2061 nt11.83□□□□□ -0.51
RPC40P07703 FUN26YAL022C 1554 nt11.83□□□□□ -0.52
RPC40P07703 WWM1YFL010C 636 nt11.81□□□□□ -0.52
RPC40P07703 EMI2YDR516C 1503 nt11.72□□□□□ -0.53
RPC40P07703 PTP1YDL230W 1008 nt11.72□□□□□ -0.53
RPC40P07703 TRM9YML014W 840 nt11.69□□□□□ -0.54
RPC40P07703 MOT3YMR070W 1473 nt11.69□□□□□ -0.54
RPC40P07703 CAC2YML102W 1407 nt11.69□□□□□ -0.54
RPC40P07703 SHU1YHL006C 453 nt11.67□□□□□ -0.54
RPC40P07703 ALF1YNL148C 765 nt11.66□□□□□ -0.54
RPC40P07703 TAT1YBR069C 1860 nt11.66□□□□□ -0.54
RPC40P07703 YBR220CYBR220C 1683 nt11.65□□□□□ -0.54
RPC40P07703 LSM3YLR438C-A 270 nt11.65□□□□□ -0.54
RPC40P07703 RPP2AYOL039W 321 nt11.64□□□□□ -0.55
RPC40P07703 CCT6YDR188W 1641 nt11.64□□□□□ -0.55
RPC40P07703 YDL221WYDL221W 552 nt11.62□□□□□ -0.55
RPC40P07703 YAL037C-BYAL037C-B 975 nt11.61□□□□□ -0.55
RPC40P07703 YFL021C-AYFL021C-A 855 nt11.57□□□□□ -0.56
RPC40P07703 HOM6YJR139C 1080 nt11.57□□□□□ -0.56
RPC40P07703 YMR090WYMR090W 684 nt11.57□□□□□ -0.56
RPC40P07703 SIS1YNL007C 1059 nt11.57□□□□□ -0.56
RPC40P07703 YGR021WYGR021W 873 nt11.55□□□□□ -0.56
RPC40P07703 SDH1YKL148C 1923 nt11.54□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms