Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 YML009W-BYML009W-B 477 nt21.89■■□□□ 1.09
TUP1P16649 NSR1YGR159C 1245 nt21.86■■□□□ 1.09
TUP1P16649 NOP1YDL014W 984 nt21.07■□□□□ 0.96
TUP1P16649 MDJ1YFL016C 1536 nt19.76■□□□□ 0.75
TUP1P16649 YKL036CYKL036C 393 nt19.31■□□□□ 0.68
TUP1P16649 SRX1YKL086W 384 nt18.48■□□□□ 0.55
TUP1P16649 Q0297Q0297 156 nt18.44■□□□□ 0.54
TUP1P16649 YJL027CYJL027C 417 nt18.11■□□□□ 0.49
TUP1P16649 YCR051WYCR051W 669 nt17.55■□□□□ 0.4
TUP1P16649 SCS3YGL126W 1143 nt17.53■□□□□ 0.4
TUP1P16649 DBP2YNL112W 1641 nt17.41■□□□□ 0.38
TUP1P16649 TRN1tP(UGG)A 72 nt16.87■□□□□ 0.29
TUP1P16649 SUF9tP(UGG)F 72 nt16.87■□□□□ 0.29
TUP1P16649 SUF8tP(UGG)H 72 nt16.87■□□□□ 0.29
TUP1P16649 tP(UGG)LtP(UGG)L 72 nt16.87■□□□□ 0.29
TUP1P16649 SUF7tP(UGG)M 72 nt16.87■□□□□ 0.29
TUP1P16649 tP(UGG)N1tP(UGG)N1 72 nt16.87■□□□□ 0.29
TUP1P16649 tP(UGG)N2tP(UGG)N2 72 nt16.87■□□□□ 0.29
TUP1P16649 tP(UGG)O1tP(UGG)O1 72 nt16.87■□□□□ 0.29
TUP1P16649 SUF11tP(UGG)O2 72 nt16.87■□□□□ 0.29
TUP1P16649 YOL085CYOL085C 342 nt16.79■□□□□ 0.28
TUP1P16649 YBR190WYBR190W 312 nt16.79■□□□□ 0.28
TUP1P16649 CCC1YLR220W 969 nt16.75■□□□□ 0.27
TUP1P16649 PKP1YIL042C 1185 nt16.64■□□□□ 0.25
TUP1P16649 RPP1BYDL130W 321 nt16.55■□□□□ 0.24
TUP1P16649 RTC3YHR087W 336 nt16.44■□□□□ 0.22
TUP1P16649 SCJ1YMR214W 1134 nt16.21■□□□□ 0.19
TUP1P16649 RVS167YDR388W 1449 nt16.13■□□□□ 0.17
TUP1P16649 PET122YER153C 765 nt15.92■□□□□ 0.14
TUP1P16649 tP(UGG)O3tP(UGG)O3 72 nt15.89■□□□□ 0.13
TUP1P16649 SSA3YBL075C 1950 nt15.61■□□□□ 0.09
TUP1P16649 ATS1YAL020C 1002 nt15.59■□□□□ 0.09
TUP1P16649 SHR5YOL110W 714 nt15.58■□□□□ 0.08
TUP1P16649 SCR1SCR1 522 nt15.55■□□□□ 0.08
TUP1P16649 PUT4YOR348C 1884 nt15.49■□□□□ 0.07
TUP1P16649 RRN5YLR141W 1092 nt15.42■□□□□ 0.06
TUP1P16649 DEP1YAL013W 1218 nt15.33■□□□□ 0.04
TUP1P16649 URN1YPR152C 1398 nt15.33■□□□□ 0.04
TUP1P16649 YDJ1YNL064C 1230 nt15.32■□□□□ 0.04
TUP1P16649 ARE1YCR048W 1833 nt15.17■□□□□ 0.02
TUP1P16649 SAH1YER043C 1350 nt15.16■□□□□ 0.02
TUP1P16649 OPI9YLR338W 858 nt15.12■□□□□ 0.01
TUP1P16649 YER088W-BYER088W-B 147 nt15.11■□□□□ 0.01
TUP1P16649 GAR1YHR089C 618 nt15.09■□□□□ 0.01
TUP1P16649 POA1YBR022W 534 nt15.01□□□□□ -0.01
TUP1P16649 RSB1YOR049C 1065 nt15□□□□□ -0.01
TUP1P16649 YHR049C-AYHR049C-A 297 nt14.95□□□□□ -0.02
TUP1P16649 YNL208WYNL208W 600 nt14.94□□□□□ -0.02
TUP1P16649 RPN10YHR200W 807 nt14.91□□□□□ -0.02
TUP1P16649 BSC6YOL137W 1494 nt14.71□□□□□ -0.05
TUP1P16649 PUN1YLR414C 792 nt14.62□□□□□ -0.07
TUP1P16649 YJR018WYJR018W 363 nt14.59□□□□□ -0.07
TUP1P16649 BUD23YCR047C 828 nt14.58□□□□□ -0.08
TUP1P16649 PTC2YER089C 1395 nt14.58□□□□□ -0.08
TUP1P16649 TIR1YER011W 765 nt14.57□□□□□ -0.08
TUP1P16649 SSA1YAL005C 1929 nt14.51□□□□□ -0.09
TUP1P16649 PST2YDR032C 597 nt14.49□□□□□ -0.09
TUP1P16649 YJR120WYJR120W 351 nt14.46□□□□□ -0.09
TUP1P16649 NAB2YGL122C 1578 nt14.35□□□□□ -0.11
TUP1P16649 SRB2YHR041C 633 nt14.35□□□□□ -0.11
TUP1P16649 SPT5YML010W 3192 nt14.22□□□□□ -0.13
TUP1P16649 FIS1YIL065C 468 nt14.22□□□□□ -0.13
TUP1P16649 RPP2BYDR382W 333 nt14.15□□□□□ -0.14
TUP1P16649 FPR4YLR449W 1179 nt14.14□□□□□ -0.15
TUP1P16649 DAL1YIR027C 1383 nt14.13□□□□□ -0.15
TUP1P16649 PHO4YFR034C 939 nt14.04□□□□□ -0.16
TUP1P16649 INM2YDR287W 879 nt14.03□□□□□ -0.16
TUP1P16649 SHU1YHL006C 453 nt14□□□□□ -0.17
TUP1P16649 WWM1YFL010C 636 nt13.96□□□□□ -0.17
TUP1P16649 YBL100CYBL100C 315 nt13.92□□□□□ -0.18
TUP1P16649 YAL037C-BYAL037C-B 975 nt13.91□□□□□ -0.18
TUP1P16649 BDH2YAL061W 1254 nt13.89□□□□□ -0.19
TUP1P16649 YPS1YLR120C 1710 nt13.84□□□□□ -0.19
TUP1P16649 MEP2YNL142W 1500 nt13.8□□□□□ -0.2
TUP1P16649 FUN26YAL022C 1554 nt13.77□□□□□ -0.21
TUP1P16649 SSA4YER103W 1929 nt13.76□□□□□ -0.21
TUP1P16649 YKL097CYKL097C 411 nt13.76□□□□□ -0.21
TUP1P16649 YDR095CYDR095C 411 nt13.71□□□□□ -0.21
TUP1P16649 HOM6YJR139C 1080 nt13.7□□□□□ -0.22
TUP1P16649 MNP1YGL068W 585 nt13.68□□□□□ -0.22
TUP1P16649 YHR165W-AYHR165W-A 312 nt13.68□□□□□ -0.22
TUP1P16649 DCW1YKL046C 1350 nt13.68□□□□□ -0.22
TUP1P16649 YGR021WYGR021W 873 nt13.65□□□□□ -0.22
TUP1P16649 TRM9YML014W 840 nt13.65□□□□□ -0.22
TUP1P16649 YFL021C-AYFL021C-A 855 nt13.62□□□□□ -0.23
TUP1P16649 LSM3YLR438C-A 270 nt13.62□□□□□ -0.23
TUP1P16649 ALF1YNL148C 765 nt13.55□□□□□ -0.24
TUP1P16649 CCT6YDR188W 1641 nt13.54□□□□□ -0.24
TUP1P16649 PTP1YDL230W 1008 nt13.51□□□□□ -0.25
TUP1P16649 RKM5YLR137W 1104 nt13.49□□□□□ -0.25
TUP1P16649 CAC2YML102W 1407 nt13.46□□□□□ -0.26
TUP1P16649 RPP2AYOL039W 321 nt13.44□□□□□ -0.26
TUP1P16649 EMI2YDR516C 1503 nt13.42□□□□□ -0.26
TUP1P16649 SIS1YNL007C 1059 nt13.41□□□□□ -0.26
TUP1P16649 SUF2tP(AGG)C 72 nt13.36□□□□□ -0.27
TUP1P16649 SUF10tP(AGG)N 72 nt13.36□□□□□ -0.27
TUP1P16649 YOR139CYOR139C 393 nt13.36□□□□□ -0.27
TUP1P16649 YDL221WYDL221W 552 nt13.29□□□□□ -0.28
TUP1P16649 ART5YGR068C 1761 nt13.29□□□□□ -0.28
TUP1P16649 BDF1YLR399C 2061 nt13.26□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 52.5 ms