RNA–Protein interactions for RNA: YGL211W

NCS6, Transcript of Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs, yeast

Gene NCS6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS6	YGL211W	SPP382	Q06411	708 aa	Predicted RBP	6.31	□□□□□ -1.4
NCS6	YGL211W	RCL1	Q08096	367 aa	Predicted RBP	6.31	□□□□□ -1.4
NCS6	YGL211W	RVB2	Q12464	471 aa	Known RBP	6.31	□□□□□ -1.4
NCS6	YGL211W	RPS21B	Q3E754	87 aa	Known RBP	6.31	□□□□□ -1.4
NCS6	YGL211W	FUM1	P08417	488 aa	Known RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	MTF2	P10849	440 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	SNF5	P18480	905 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	YCL049C	P25577	312 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	GPI10	P30777	616 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	ERG3	P32353	365 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	SMI1	P32566	505 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	SDS22	P36047	338 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	CAB3	P36076	571 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	YHL012W	P38709	493 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	YER010C	P40011	234 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	RPN3	P40016	523 aa	Known RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	PSF2	P40359	213 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	LCB2	P40970	561 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	YFL054C	P43549	646 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	UBC9	P50623	157 aa	Predicted RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	CPR6	P53691	371 aa	Known RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	ALF1	P53904	254 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	SFB2	P53953	876 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	RPT6	Q01939	405 aa	Known RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	VTC3	Q02725	835 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	CWC21	Q03375	135 aa	Known RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	MED7	Q08278	222 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	VHS3	Q08438	674 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	MCH5	Q08777	521 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	TRE1	Q08919	783 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	TRM8	Q12009	286 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	APL4	Q12028	832 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	HFI1	Q12060	488 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	GNT1	Q12096	491 aa		6.3	□□□□□ -1.4
NCS6	YGL211W	RRP36	Q12481	300 aa	Predicted RBP	6.3	□□□□□ -1.4
NCS6	YGL211W	ARG3	P05150	338 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	SGF29	P25554	259 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	TFB1	P32776	642 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	OAF3	P36023	863 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	TOS1	P38288	455 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	TIF5	P38431	405 aa	Known RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	RFC1	P38630	861 aa	Known RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	DUN1	P39009	513 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	NPR2	P39923	615 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	MNP1	P53163	194 aa	Predicted RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	ARE2	P53629	642 aa	Known RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	ADA2	Q02336	434 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	DPB4	Q04603	196 aa	Known RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	HAL9	Q12180	1030 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	FRE6	Q12473	712 aa		6.29	□□□□□ -1.4
NCS6	YGL211W	PGA3	Q12746	312 aa	Known RBP	6.29	□□□□□ -1.4
NCS6	YGL211W	NCP1	P16603	691 aa	Known RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	UBC1	P21734	215 aa	Known RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	ADP1	P25371	1049 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	SEC65	P29478	273 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	CCR4	P31384	837 aa	Known RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	NIP100	P33420	868 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	RMA1	P36001	430 aa	Known RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	EMC3	P36039	253 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	YHR202W	P38887	602 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
NCS6	YGL211W	CTH1	P47976	325 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	NIT3	P49954	291 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	INP52	P50942	1183 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	SDH1	Q00711	640 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	HOS3	Q02959	697 aa	Known RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	HOT1	Q03213	719 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	GYL1	Q04322	720 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	MLH2	Q07980	695 aa		6.28	□□□□□ -1.4
NCS6	YGL211W	CWC2	Q12046	339 aa	Predicted RBP	6.28	□□□□□ -1.4
NCS6	YGL211W	THR1	P17423	357 aa	Known RBP	6.27	□□□□□ -1.41
NCS6	YGL211W	ATP12	P22135	325 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	DBP2	P24783	546 aa	Known RBP	6.27	□□□□□ -1.41
NCS6	YGL211W	ROX1	P25042	368 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	DAL80	P26343	269 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	RTS1	P38903	757 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	PNT1	P38969	423 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	YEL025C	P39991	1188 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	PUG1	P40100	303 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	LTP1	P40347	161 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	ART5	P53244	586 aa	Known RBP	6.27	□□□□□ -1.41
NCS6	YGL211W	TNA1	P53322	534 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	SPO1	P53541	631 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	RIA1	P53893	1110 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	SSL2	Q00578	843 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	YDR131C	Q03899	556 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	PDH1	Q12428	516 aa	Known RBP	6.27	□□□□□ -1.41
NCS6	YGL211W	RTN2	Q12443	393 aa		6.27	□□□□□ -1.41
NCS6	YGL211W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
NCS6	YGL211W	GCN4	P03069	281 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	RPL11A	P0C0W9	174 aa	Known RBP	6.26	□□□□□ -1.41
NCS6	YGL211W	HNM1	P19807	563 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	CBP3	P21560	335 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	CLB4	P24871	460 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	STE50	P25344	346 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	PPQ1	P32945	549 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	MDL2	P33311	773 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	FAT1	P38225	669 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	IFA38	P38286	347 aa		6.26	□□□□□ -1.41
NCS6	YGL211W	RRT6	P53117	311 aa	Predicted RBP	6.26	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms