Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 YML009W-BYML009W-B 477 nt17.9■□□□□ 0.46
NIT3P49954 NSR1YGR159C 1245 nt17.76■□□□□ 0.43
NIT3P49954 NOP1YDL014W 984 nt17.37■□□□□ 0.37
NIT3P49954 YKL036CYKL036C 393 nt16.01■□□□□ 0.15
NIT3P49954 MDJ1YFL016C 1536 nt15.9■□□□□ 0.14
NIT3P49954 Q0297Q0297 156 nt15.18■□□□□ 0.02
NIT3P49954 SRX1YKL086W 384 nt15.17■□□□□ 0.02
NIT3P49954 YJL027CYJL027C 417 nt14.96□□□□□ -0.01
NIT3P49954 SCS3YGL126W 1143 nt14.56□□□□□ -0.08
NIT3P49954 YCR051WYCR051W 669 nt14.42□□□□□ -0.1
NIT3P49954 DBP2YNL112W 1641 nt13.99□□□□□ -0.17
NIT3P49954 YOL085CYOL085C 342 nt13.87□□□□□ -0.19
NIT3P49954 SSA3YBL075C 1950 nt13.78□□□□□ -0.2
NIT3P49954 TRN1tP(UGG)A 72 nt13.73□□□□□ -0.21
NIT3P49954 SUF9tP(UGG)F 72 nt13.73□□□□□ -0.21
NIT3P49954 SUF8tP(UGG)H 72 nt13.73□□□□□ -0.21
NIT3P49954 tP(UGG)LtP(UGG)L 72 nt13.73□□□□□ -0.21
NIT3P49954 SUF7tP(UGG)M 72 nt13.73□□□□□ -0.21
NIT3P49954 tP(UGG)N1tP(UGG)N1 72 nt13.73□□□□□ -0.21
NIT3P49954 tP(UGG)N2tP(UGG)N2 72 nt13.73□□□□□ -0.21
NIT3P49954 tP(UGG)O1tP(UGG)O1 72 nt13.73□□□□□ -0.21
NIT3P49954 SUF11tP(UGG)O2 72 nt13.73□□□□□ -0.21
NIT3P49954 PKP1YIL042C 1185 nt13.69□□□□□ -0.22
NIT3P49954 YBR190WYBR190W 312 nt13.67□□□□□ -0.22
NIT3P49954 RPP1BYDL130W 321 nt13.63□□□□□ -0.23
NIT3P49954 CCC1YLR220W 969 nt13.63□□□□□ -0.23
NIT3P49954 Q0182Q0182 405 nt13.43□□□□□ -0.26
NIT3P49954 RTC3YHR087W 336 nt13.3□□□□□ -0.28
NIT3P49954 RVS167YDR388W 1449 nt13.14□□□□□ -0.31
NIT3P49954 SCJ1YMR214W 1134 nt13.07□□□□□ -0.32
NIT3P49954 PET122YER153C 765 nt13.04□□□□□ -0.32
NIT3P49954 ATS1YAL020C 1002 nt13.01□□□□□ -0.33
NIT3P49954 tP(UGG)O3tP(UGG)O3 72 nt12.98□□□□□ -0.33
NIT3P49954 MOT3YMR070W 1473 nt12.96□□□□□ -0.34
NIT3P49954 SCR1SCR1 522 nt12.9□□□□□ -0.34
NIT3P49954 PUT4YOR348C 1884 nt12.69□□□□□ -0.38
NIT3P49954 SHR5YOL110W 714 nt12.67□□□□□ -0.38
NIT3P49954 RRN5YLR141W 1092 nt12.66□□□□□ -0.38
NIT3P49954 YDJ1YNL064C 1230 nt12.55□□□□□ -0.4
NIT3P49954 YER088W-BYER088W-B 147 nt12.41□□□□□ -0.42
NIT3P49954 RSB1YOR049C 1065 nt12.41□□□□□ -0.42
NIT3P49954 ARE1YCR048W 1833 nt12.35□□□□□ -0.43
NIT3P49954 URN1YPR152C 1398 nt12.35□□□□□ -0.43
NIT3P49954 DEP1YAL013W 1218 nt12.35□□□□□ -0.43
NIT3P49954 GAR1YHR089C 618 nt12.31□□□□□ -0.44
NIT3P49954 OPI9YLR338W 858 nt12.27□□□□□ -0.45
NIT3P49954 SAH1YER043C 1350 nt12.26□□□□□ -0.45
NIT3P49954 POA1YBR022W 534 nt12.24□□□□□ -0.45
NIT3P49954 YHR049C-AYHR049C-A 297 nt12.15□□□□□ -0.46
NIT3P49954 RPN10YHR200W 807 nt12.15□□□□□ -0.46
NIT3P49954 YNL208WYNL208W 600 nt12.13□□□□□ -0.47
NIT3P49954 PST2YDR032C 597 nt12.05□□□□□ -0.48
NIT3P49954 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
NIT3P49954 PUN1YLR414C 792 nt11.89□□□□□ -0.51
NIT3P49954 TIR1YER011W 765 nt11.88□□□□□ -0.51
NIT3P49954 NVJ2YPR091C 2313 nt11.83□□□□□ -0.51
NIT3P49954 BUD23YCR047C 828 nt11.83□□□□□ -0.52
NIT3P49954 SPT5YML010W 3192 nt11.81□□□□□ -0.52
NIT3P49954 PTC2YER089C 1395 nt11.8□□□□□ -0.52
NIT3P49954 YJR018WYJR018W 363 nt11.77□□□□□ -0.53
NIT3P49954 FPS1YLL043W 2010 nt11.76□□□□□ -0.53
NIT3P49954 PAC11YDR488C 1602 nt11.76□□□□□ -0.53
NIT3P49954 SSA1YAL005C 1929 nt11.74□□□□□ -0.53
NIT3P49954 NAB2YGL122C 1578 nt11.7□□□□□ -0.54
NIT3P49954 YKL097CYKL097C 411 nt11.59□□□□□ -0.55
NIT3P49954 SHU1YHL006C 453 nt11.58□□□□□ -0.56
NIT3P49954 YJR120WYJR120W 351 nt11.57□□□□□ -0.56
NIT3P49954 RPP2BYDR382W 333 nt11.54□□□□□ -0.56
NIT3P49954 SRB2YHR041C 633 nt11.53□□□□□ -0.56
NIT3P49954 FIS1YIL065C 468 nt11.51□□□□□ -0.57
NIT3P49954 DAL1YIR027C 1383 nt11.48□□□□□ -0.57
NIT3P49954 SSA4YER103W 1929 nt11.48□□□□□ -0.57
NIT3P49954 YAL037C-BYAL037C-B 975 nt11.43□□□□□ -0.58
NIT3P49954 INM2YDR287W 879 nt11.4□□□□□ -0.58
NIT3P49954 FPR4YLR449W 1179 nt11.4□□□□□ -0.58
NIT3P49954 PHO4YFR034C 939 nt11.37□□□□□ -0.59
NIT3P49954 WWM1YFL010C 636 nt11.36□□□□□ -0.59
NIT3P49954 MEP2YNL142W 1500 nt11.35□□□□□ -0.59
NIT3P49954 BDH2YAL061W 1254 nt11.29□□□□□ -0.6
NIT3P49954 YGR021WYGR021W 873 nt11.28□□□□□ -0.6
NIT3P49954 YPS1YLR120C 1710 nt11.28□□□□□ -0.6
NIT3P49954 BDF1YLR399C 2061 nt11.27□□□□□ -0.61
NIT3P49954 YBL100CYBL100C 315 nt11.25□□□□□ -0.61
NIT3P49954 HOM6YJR139C 1080 nt11.23□□□□□ -0.61
NIT3P49954 MNP1YGL068W 585 nt11.2□□□□□ -0.62
NIT3P49954 YDR095CYDR095C 411 nt11.16□□□□□ -0.62
NIT3P49954 YFL021C-AYFL021C-A 855 nt11.16□□□□□ -0.62
NIT3P49954 DCW1YKL046C 1350 nt11.16□□□□□ -0.62
NIT3P49954 YHR165W-AYHR165W-A 312 nt11.14□□□□□ -0.63
NIT3P49954 LSM3YLR438C-A 270 nt11.12□□□□□ -0.63
NIT3P49954 YOR139CYOR139C 393 nt11.11□□□□□ -0.63
NIT3P49954 FUN26YAL022C 1554 nt11.11□□□□□ -0.63
NIT3P49954 TRM9YML014W 840 nt11.09□□□□□ -0.63
NIT3P49954 TAT1YBR069C 1860 nt11.07□□□□□ -0.64
NIT3P49954 RKM5YLR137W 1104 nt11.07□□□□□ -0.64
NIT3P49954 NPL3YDR432W 1245 nt11.05□□□□□ -0.64
NIT3P49954 EMI2YDR516C 1503 nt11□□□□□ -0.65
NIT3P49954 YOL037CYOL037C 354 nt10.99□□□□□ -0.65
NIT3P49954 PTP1YDL230W 1008 nt10.97□□□□□ -0.65
NIT3P49954 ALF1YNL148C 765 nt10.97□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms