Protein–RNA interactions for Protein: P40970

LCB2, Serine palmitoyltransferase 2, yeastyeast

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCB2P40970 YML009W-BYML009W-B 477 nt22.28■■□□□ 1.16
LCB2P40970 NSR1YGR159C 1245 nt22.09■■□□□ 1.13
LCB2P40970 NOP1YDL014W 984 nt21.58■■□□□ 1.05
LCB2P40970 YKL036CYKL036C 393 nt19.95■□□□□ 0.78
LCB2P40970 MDJ1YFL016C 1536 nt19.72■□□□□ 0.75
LCB2P40970 Q0297Q0297 156 nt18.91■□□□□ 0.62
LCB2P40970 SRX1YKL086W 384 nt18.89■□□□□ 0.61
LCB2P40970 YJL027CYJL027C 417 nt18.64■□□□□ 0.57
LCB2P40970 SCS3YGL126W 1143 nt18.19■□□□□ 0.5
LCB2P40970 YCR051WYCR051W 669 nt17.97■□□□□ 0.47
LCB2P40970 DBP2YNL112W 1641 nt17.44■□□□□ 0.38
LCB2P40970 YOL085CYOL085C 342 nt17.32■□□□□ 0.36
LCB2P40970 PKP1YIL042C 1185 nt17.12■□□□□ 0.33
LCB2P40970 TRN1tP(UGG)A 72 nt17.1■□□□□ 0.33
LCB2P40970 SUF9tP(UGG)F 72 nt17.1■□□□□ 0.33
LCB2P40970 SUF8tP(UGG)H 72 nt17.1■□□□□ 0.33
LCB2P40970 tP(UGG)LtP(UGG)L 72 nt17.1■□□□□ 0.33
LCB2P40970 SUF7tP(UGG)M 72 nt17.1■□□□□ 0.33
LCB2P40970 tP(UGG)N1tP(UGG)N1 72 nt17.1■□□□□ 0.33
LCB2P40970 tP(UGG)N2tP(UGG)N2 72 nt17.1■□□□□ 0.33
LCB2P40970 tP(UGG)O1tP(UGG)O1 72 nt17.1■□□□□ 0.33
LCB2P40970 SUF11tP(UGG)O2 72 nt17.1■□□□□ 0.33
LCB2P40970 RPP1BYDL130W 321 nt16.99■□□□□ 0.31
LCB2P40970 CCC1YLR220W 969 nt16.99■□□□□ 0.31
LCB2P40970 YBR190WYBR190W 312 nt16.73■□□□□ 0.27
LCB2P40970 RTC3YHR087W 336 nt16.4■□□□□ 0.22
LCB2P40970 SCJ1YMR214W 1134 nt16.32■□□□□ 0.2
LCB2P40970 RVS167YDR388W 1449 nt16.29■□□□□ 0.2
LCB2P40970 PET122YER153C 765 nt16.28■□□□□ 0.2
LCB2P40970 ATS1YAL020C 1002 nt16.26■□□□□ 0.19
LCB2P40970 tP(UGG)O3tP(UGG)O3 72 nt16.19■□□□□ 0.18
LCB2P40970 SCR1SCR1 522 nt16.02■□□□□ 0.16
LCB2P40970 RRN5YLR141W 1092 nt15.81■□□□□ 0.12
LCB2P40970 SHR5YOL110W 714 nt15.76■□□□□ 0.11
LCB2P40970 YDJ1YNL064C 1230 nt15.61■□□□□ 0.09
LCB2P40970 YER088W-BYER088W-B 147 nt15.5■□□□□ 0.07
LCB2P40970 RSB1YOR049C 1065 nt15.47■□□□□ 0.07
LCB2P40970 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
LCB2P40970 URN1YPR152C 1398 nt15.36■□□□□ 0.05
LCB2P40970 GAR1YHR089C 618 nt15.34■□□□□ 0.05
LCB2P40970 PUT4YOR348C 1884 nt15.25■□□□□ 0.03
LCB2P40970 OPI9YLR338W 858 nt15.1■□□□□ 0.01
LCB2P40970 YNL208WYNL208W 600 nt15.07■□□□□ 0
LCB2P40970 SAH1YER043C 1350 nt15.07■□□□□ 0
LCB2P40970 PST2YDR032C 597 nt15.06■□□□□ 0
LCB2P40970 RPN10YHR200W 807 nt15.04■□□□□ -0
LCB2P40970 ARE1YCR048W 1833 nt14.98□□□□□ -0.01
LCB2P40970 TIR1YER011W 765 nt14.8□□□□□ -0.04
LCB2P40970 POA1YBR022W 534 nt14.8□□□□□ -0.04
LCB2P40970 YHR049C-AYHR049C-A 297 nt14.78□□□□□ -0.04
LCB2P40970 SSA1YAL005C 1929 nt14.66□□□□□ -0.06
LCB2P40970 YJR018WYJR018W 363 nt14.63□□□□□ -0.07
LCB2P40970 PUN1YLR414C 792 nt14.63□□□□□ -0.07
LCB2P40970 PTC2YER089C 1395 nt14.52□□□□□ -0.08
LCB2P40970 SRB2YHR041C 633 nt14.49□□□□□ -0.09
LCB2P40970 SHU1YHL006C 453 nt14.48□□□□□ -0.09
LCB2P40970 YJR120WYJR120W 351 nt14.47□□□□□ -0.09
LCB2P40970 BSC6YOL137W 1494 nt14.45□□□□□ -0.1
LCB2P40970 BUD23YCR047C 828 nt14.45□□□□□ -0.1
LCB2P40970 YKL097CYKL097C 411 nt14.44□□□□□ -0.1
LCB2P40970 YAL037C-BYAL037C-B 975 nt14.32□□□□□ -0.12
LCB2P40970 RPP2BYDR382W 333 nt14.29□□□□□ -0.12
LCB2P40970 NAB2YGL122C 1578 nt14.29□□□□□ -0.12
LCB2P40970 WWM1YFL010C 636 nt14.19□□□□□ -0.14
LCB2P40970 SSA3YBL075C 1950 nt14.17□□□□□ -0.14
LCB2P40970 FPR4YLR449W 1179 nt14.14□□□□□ -0.15
LCB2P40970 FIS1YIL065C 468 nt14.12□□□□□ -0.15
LCB2P40970 DAL1YIR027C 1383 nt14.1□□□□□ -0.15
LCB2P40970 INM2YDR287W 879 nt14.07□□□□□ -0.16
LCB2P40970 BDH2YAL061W 1254 nt14.03□□□□□ -0.16
LCB2P40970 HOM6YJR139C 1080 nt14.02□□□□□ -0.17
LCB2P40970 MNP1YGL068W 585 nt14.01□□□□□ -0.17
LCB2P40970 YGR021WYGR021W 873 nt14□□□□□ -0.17
LCB2P40970 PHO4YFR034C 939 nt13.99□□□□□ -0.17
LCB2P40970 YBL100CYBL100C 315 nt13.98□□□□□ -0.17
LCB2P40970 YOR139CYOR139C 393 nt13.92□□□□□ -0.18
LCB2P40970 YFL021C-AYFL021C-A 855 nt13.88□□□□□ -0.19
LCB2P40970 LSM3YLR438C-A 270 nt13.82□□□□□ -0.2
LCB2P40970 FUN26YAL022C 1554 nt13.82□□□□□ -0.2
LCB2P40970 RKM5YLR137W 1104 nt13.81□□□□□ -0.2
LCB2P40970 TRM9YML014W 840 nt13.77□□□□□ -0.21
LCB2P40970 SPT5YML010W 3192 nt13.77□□□□□ -0.21
LCB2P40970 NPL3YDR432W 1245 nt13.75□□□□□ -0.21
LCB2P40970 YPS1YLR120C 1710 nt13.72□□□□□ -0.21
LCB2P40970 YOL037CYOL037C 354 nt13.66□□□□□ -0.22
LCB2P40970 CCT6YDR188W 1641 nt13.63□□□□□ -0.23
LCB2P40970 YDR095CYDR095C 411 nt13.62□□□□□ -0.23
LCB2P40970 ALF1YNL148C 765 nt13.59□□□□□ -0.23
LCB2P40970 YHR165W-AYHR165W-A 312 nt13.57□□□□□ -0.24
LCB2P40970 MEP2YNL142W 1500 nt13.54□□□□□ -0.24
LCB2P40970 SUF2tP(AGG)C 72 nt13.46□□□□□ -0.25
LCB2P40970 SUF10tP(AGG)N 72 nt13.46□□□□□ -0.25
LCB2P40970 SIS1YNL007C 1059 nt13.41□□□□□ -0.26
LCB2P40970 YLR281CYLR281C 468 nt13.4□□□□□ -0.26
LCB2P40970 DCW1YKL046C 1350 nt13.4□□□□□ -0.26
LCB2P40970 PTP1YDL230W 1008 nt13.37□□□□□ -0.27
LCB2P40970 tM(CAU)CtM(CAU)C 72 nt13.37□□□□□ -0.27
LCB2P40970 IMT4tM(CAU)E 72 nt13.37□□□□□ -0.27
LCB2P40970 IMT3tM(CAU)J3 72 nt13.37□□□□□ -0.27
LCB2P40970 IMT1tM(CAU)O1 72 nt13.37□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms