Protein–RNA interactions for Protein: Q04603

DPB4, DNA polymerase epsilon subunit D, yeastyeast

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DPB4Q04603 NSR1YGR159C 1245 nt17.08■□□□□ 0.32
DPB4Q04603 YML009W-BYML009W-B 477 nt16.93■□□□□ 0.3
DPB4Q04603 NOP1YDL014W 984 nt16.42■□□□□ 0.22
DPB4Q04603 MDJ1YFL016C 1536 nt15.33■□□□□ 0.05
DPB4Q04603 YKL036CYKL036C 393 nt14.9□□□□□ -0.02
DPB4Q04603 SRX1YKL086W 384 nt14.32□□□□□ -0.12
DPB4Q04603 Q0297Q0297 156 nt14.26□□□□□ -0.13
DPB4Q04603 YJL027CYJL027C 417 nt14.17□□□□□ -0.14
DPB4Q04603 YCR051WYCR051W 669 nt13.54□□□□□ -0.24
DPB4Q04603 SSA3YBL075C 1950 nt13.52□□□□□ -0.24
DPB4Q04603 DBP2YNL112W 1641 nt13.46□□□□□ -0.25
DPB4Q04603 SCS3YGL126W 1143 nt13.4□□□□□ -0.26
DPB4Q04603 YBR190WYBR190W 312 nt13.19□□□□□ -0.3
DPB4Q04603 TRN1tP(UGG)A 72 nt13.09□□□□□ -0.31
DPB4Q04603 SUF9tP(UGG)F 72 nt13.09□□□□□ -0.31
DPB4Q04603 SUF8tP(UGG)H 72 nt13.09□□□□□ -0.31
DPB4Q04603 tP(UGG)LtP(UGG)L 72 nt13.09□□□□□ -0.31
DPB4Q04603 SUF7tP(UGG)M 72 nt13.09□□□□□ -0.31
DPB4Q04603 tP(UGG)N1tP(UGG)N1 72 nt13.09□□□□□ -0.31
DPB4Q04603 tP(UGG)N2tP(UGG)N2 72 nt13.09□□□□□ -0.31
DPB4Q04603 tP(UGG)O1tP(UGG)O1 72 nt13.09□□□□□ -0.31
DPB4Q04603 SUF11tP(UGG)O2 72 nt13.09□□□□□ -0.31
DPB4Q04603 CCC1YLR220W 969 nt12.91□□□□□ -0.34
DPB4Q04603 YOL085CYOL085C 342 nt12.88□□□□□ -0.35
DPB4Q04603 RTC3YHR087W 336 nt12.86□□□□□ -0.35
DPB4Q04603 RPP1BYDL130W 321 nt12.8□□□□□ -0.36
DPB4Q04603 RVS167YDR388W 1449 nt12.7□□□□□ -0.38
DPB4Q04603 PKP1YIL042C 1185 nt12.67□□□□□ -0.38
DPB4Q04603 Q0182Q0182 405 nt12.58□□□□□ -0.4
DPB4Q04603 SCJ1YMR214W 1134 nt12.49□□□□□ -0.41
DPB4Q04603 tP(UGG)O3tP(UGG)O3 72 nt12.29□□□□□ -0.44
DPB4Q04603 PET122YER153C 765 nt12.22□□□□□ -0.45
DPB4Q04603 SHR5YOL110W 714 nt12.16□□□□□ -0.46
DPB4Q04603 PUT4YOR348C 1884 nt12.13□□□□□ -0.47
DPB4Q04603 SCR1SCR1 522 nt12.09□□□□□ -0.47
DPB4Q04603 URN1YPR152C 1398 nt11.95□□□□□ -0.5
DPB4Q04603 SSA1YAL005C 1929 nt11.92□□□□□ -0.5
DPB4Q04603 ATS1YAL020C 1002 nt11.92□□□□□ -0.5
DPB4Q04603 YDJ1YNL064C 1230 nt11.92□□□□□ -0.5
DPB4Q04603 RRN5YLR141W 1092 nt11.84□□□□□ -0.51
DPB4Q04603 OPI9YLR338W 858 nt11.84□□□□□ -0.51
DPB4Q04603 ARE1YCR048W 1833 nt11.83□□□□□ -0.51
DPB4Q04603 DEP1YAL013W 1218 nt11.83□□□□□ -0.52
DPB4Q04603 SAH1YER043C 1350 nt11.79□□□□□ -0.52
DPB4Q04603 RPN10YHR200W 807 nt11.78□□□□□ -0.52
DPB4Q04603 POA1YBR022W 534 nt11.71□□□□□ -0.53
DPB4Q04603 MOT3YMR070W 1473 nt11.7□□□□□ -0.54
DPB4Q04603 YNL208WYNL208W 600 nt11.7□□□□□ -0.54
DPB4Q04603 YHR049C-AYHR049C-A 297 nt11.69□□□□□ -0.54
DPB4Q04603 GAR1YHR089C 618 nt11.65□□□□□ -0.54
DPB4Q04603 YER088W-BYER088W-B 147 nt11.61□□□□□ -0.55
DPB4Q04603 RSB1YOR049C 1065 nt11.54□□□□□ -0.56
DPB4Q04603 BSC6YOL137W 1494 nt11.52□□□□□ -0.56
DPB4Q04603 PUN1YLR414C 792 nt11.52□□□□□ -0.57
DPB4Q04603 PAC11YDR488C 1602 nt11.5□□□□□ -0.57
DPB4Q04603 NVJ2YPR091C 2313 nt11.46□□□□□ -0.57
DPB4Q04603 SSA4YER103W 1929 nt11.41□□□□□ -0.58
DPB4Q04603 BUD23YCR047C 828 nt11.39□□□□□ -0.59
DPB4Q04603 FPS1YLL043W 2010 nt11.38□□□□□ -0.59
DPB4Q04603 YJR018WYJR018W 363 nt11.38□□□□□ -0.59
DPB4Q04603 PTC2YER089C 1395 nt11.38□□□□□ -0.59
DPB4Q04603 NAB2YGL122C 1578 nt11.29□□□□□ -0.6
DPB4Q04603 TIR1YER011W 765 nt11.28□□□□□ -0.6
DPB4Q04603 SPT5YML010W 3192 nt11.24□□□□□ -0.61
DPB4Q04603 BDF1YLR399C 2061 nt11.15□□□□□ -0.63
DPB4Q04603 RPP2BYDR382W 333 nt11.14□□□□□ -0.63
DPB4Q04603 YJL225CYJL225C 5277 nt11.12□□□□□ -0.63
DPB4Q04603 YJR120WYJR120W 351 nt11.11□□□□□ -0.63
DPB4Q04603 DAL1YIR027C 1383 nt11.09□□□□□ -0.63
DPB4Q04603 FIS1YIL065C 468 nt11.09□□□□□ -0.63
DPB4Q04603 PST2YDR032C 597 nt11.07□□□□□ -0.64
DPB4Q04603 INM2YDR287W 879 nt11.04□□□□□ -0.64
DPB4Q04603 FPR4YLR449W 1179 nt11.03□□□□□ -0.64
DPB4Q04603 TAT1YBR069C 1860 nt10.98□□□□□ -0.65
DPB4Q04603 PHO4YFR034C 939 nt10.97□□□□□ -0.65
DPB4Q04603 RDN37-1RDN37-1 5354 nt10.9□□□□□ -0.66
DPB4Q04603 RDN37-2RDN37-2 5354 nt10.9□□□□□ -0.66
DPB4Q04603 SRB2YHR041C 633 nt10.88□□□□□ -0.67
DPB4Q04603 YBL100CYBL100C 315 nt10.88□□□□□ -0.67
DPB4Q04603 YPS1YLR120C 1710 nt10.85□□□□□ -0.67
DPB4Q04603 BDH2YAL061W 1254 nt10.85□□□□□ -0.67
DPB4Q04603 MEP2YNL142W 1500 nt10.84□□□□□ -0.67
DPB4Q04603 YDR095CYDR095C 411 nt10.75□□□□□ -0.69
DPB4Q04603 YHR165W-AYHR165W-A 312 nt10.75□□□□□ -0.69
DPB4Q04603 FUN26YAL022C 1554 nt10.73□□□□□ -0.69
DPB4Q04603 WWM1YFL010C 636 nt10.71□□□□□ -0.69
DPB4Q04603 TRM9YML014W 840 nt10.69□□□□□ -0.7
DPB4Q04603 RPM1RPM1 483 nt10.69□□□□□ -0.7
DPB4Q04603 LSM3YLR438C-A 270 nt10.68□□□□□ -0.7
DPB4Q04603 YGR021WYGR021W 873 nt10.66□□□□□ -0.7
DPB4Q04603 SHU1YHL006C 453 nt10.66□□□□□ -0.7
DPB4Q04603 ALF1YNL148C 765 nt10.66□□□□□ -0.7
DPB4Q04603 DCW1YKL046C 1350 nt10.63□□□□□ -0.71
DPB4Q04603 YFL021C-AYFL021C-A 855 nt10.61□□□□□ -0.71
DPB4Q04603 CCT6YDR188W 1641 nt10.6□□□□□ -0.71
DPB4Q04603 UME6YDR207C 2511 nt10.56□□□□□ -0.72
DPB4Q04603 SUF2tP(AGG)C 72 nt10.56□□□□□ -0.72
DPB4Q04603 SUF10tP(AGG)N 72 nt10.56□□□□□ -0.72
DPB4Q04603 HOM6YJR139C 1080 nt10.56□□□□□ -0.72
DPB4Q04603 RPP2AYOL039W 321 nt10.55□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms