Protein–RNA interactions for Protein: P53953

SFB2, SED5-binding protein 2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB2P53953 YML009W-BYML009W-B 477 nt21.02■□□□□ 0.96
SFB2P53953 NOP1YDL014W 984 nt20.68■□□□□ 0.9
SFB2P53953 NSR1YGR159C 1245 nt20.52■□□□□ 0.88
SFB2P53953 YKL036CYKL036C 393 nt19.49■□□□□ 0.71
SFB2P53953 YJL027CYJL027C 417 nt18.28■□□□□ 0.52
SFB2P53953 Q0297Q0297 156 nt18.24■□□□□ 0.51
SFB2P53953 SRX1YKL086W 384 nt18.05■□□□□ 0.48
SFB2P53953 SCS3YGL126W 1143 nt17.95■□□□□ 0.46
SFB2P53953 MDJ1YFL016C 1536 nt17.7■□□□□ 0.42
SFB2P53953 YCR051WYCR051W 669 nt17.14■□□□□ 0.33
SFB2P53953 YOL085CYOL085C 342 nt16.87■□□□□ 0.29
SFB2P53953 SCJ1YMR214W 1134 nt16.56■□□□□ 0.24
SFB2P53953 PKP1YIL042C 1185 nt16.52■□□□□ 0.24
SFB2P53953 RPP1BYDL130W 321 nt16.36■□□□□ 0.21
SFB2P53953 ATS1YAL020C 1002 nt16.22■□□□□ 0.19
SFB2P53953 TRN1tP(UGG)A 72 nt16.01■□□□□ 0.15
SFB2P53953 SUF9tP(UGG)F 72 nt16.01■□□□□ 0.15
SFB2P53953 SUF8tP(UGG)H 72 nt16.01■□□□□ 0.15
SFB2P53953 tP(UGG)LtP(UGG)L 72 nt16.01■□□□□ 0.15
SFB2P53953 SUF7tP(UGG)M 72 nt16.01■□□□□ 0.15
SFB2P53953 tP(UGG)N1tP(UGG)N1 72 nt16.01■□□□□ 0.15
SFB2P53953 tP(UGG)N2tP(UGG)N2 72 nt16.01■□□□□ 0.15
SFB2P53953 tP(UGG)O1tP(UGG)O1 72 nt16.01■□□□□ 0.15
SFB2P53953 SUF11tP(UGG)O2 72 nt16.01■□□□□ 0.15
SFB2P53953 DBP2YNL112W 1641 nt15.86■□□□□ 0.13
SFB2P53953 CCC1YLR220W 969 nt15.86■□□□□ 0.13
SFB2P53953 PET122YER153C 765 nt15.55■□□□□ 0.08
SFB2P53953 SCR1SCR1 522 nt15.55■□□□□ 0.08
SFB2P53953 SSA3YBL075C 1950 nt15.43■□□□□ 0.06
SFB2P53953 tP(UGG)O3tP(UGG)O3 72 nt15.32■□□□□ 0.04
SFB2P53953 RRN5YLR141W 1092 nt15.17■□□□□ 0.02
SFB2P53953 RVS167YDR388W 1449 nt15.08■□□□□ 0
SFB2P53953 RTC3YHR087W 336 nt15.02■□□□□ -0
SFB2P53953 YBR190WYBR190W 312 nt15.02■□□□□ -0
SFB2P53953 RSB1YOR049C 1065 nt14.99□□□□□ -0.01
SFB2P53953 PST2YDR032C 597 nt14.94□□□□□ -0.02
SFB2P53953 YER088W-BYER088W-B 147 nt14.87□□□□□ -0.03
SFB2P53953 YDJ1YNL064C 1230 nt14.83□□□□□ -0.04
SFB2P53953 SHR5YOL110W 714 nt14.65□□□□□ -0.06
SFB2P53953 YKL097CYKL097C 411 nt14.59□□□□□ -0.07
SFB2P53953 GAR1YHR089C 618 nt14.4□□□□□ -0.1
SFB2P53953 SHU1YHL006C 453 nt14.2□□□□□ -0.14
SFB2P53953 DEP1YAL013W 1218 nt14.04□□□□□ -0.16
SFB2P53953 PUT4YOR348C 1884 nt13.95□□□□□ -0.18
SFB2P53953 URN1YPR152C 1398 nt13.93□□□□□ -0.18
SFB2P53953 TIR1YER011W 765 nt13.91□□□□□ -0.18
SFB2P53953 YNL208WYNL208W 600 nt13.91□□□□□ -0.18
SFB2P53953 YOR139CYOR139C 393 nt13.9□□□□□ -0.18
SFB2P53953 RPN10YHR200W 807 nt13.87□□□□□ -0.19
SFB2P53953 YAL037C-BYAL037C-B 975 nt13.82□□□□□ -0.2
SFB2P53953 NPL3YDR432W 1245 nt13.7□□□□□ -0.22
SFB2P53953 OPI9YLR338W 858 nt13.64□□□□□ -0.23
SFB2P53953 SSA1YAL005C 1929 nt13.62□□□□□ -0.23
SFB2P53953 SPT5YML010W 3192 nt13.61□□□□□ -0.23
SFB2P53953 YGR021WYGR021W 873 nt13.46□□□□□ -0.25
SFB2P53953 SSA4YER103W 1929 nt13.45□□□□□ -0.26
SFB2P53953 SRB2YHR041C 633 nt13.44□□□□□ -0.26
SFB2P53953 HOM6YJR139C 1080 nt13.42□□□□□ -0.26
SFB2P53953 SAH1YER043C 1350 nt13.41□□□□□ -0.26
SFB2P53953 YOL037CYOL037C 354 nt13.4□□□□□ -0.26
SFB2P53953 MNP1YGL068W 585 nt13.39□□□□□ -0.27
SFB2P53953 ARE1YCR048W 1833 nt13.39□□□□□ -0.27
SFB2P53953 WWM1YFL010C 636 nt13.36□□□□□ -0.27
SFB2P53953 tM(CAU)CtM(CAU)C 72 nt13.35□□□□□ -0.27
SFB2P53953 IMT4tM(CAU)E 72 nt13.35□□□□□ -0.27
SFB2P53953 IMT3tM(CAU)J3 72 nt13.35□□□□□ -0.27
SFB2P53953 IMT1tM(CAU)O1 72 nt13.35□□□□□ -0.27
SFB2P53953 IMT2tM(CAU)P 72 nt13.35□□□□□ -0.27
SFB2P53953 YJR018WYJR018W 363 nt13.33□□□□□ -0.28
SFB2P53953 POA1YBR022W 534 nt13.33□□□□□ -0.28
SFB2P53953 PUN1YLR414C 792 nt13.26□□□□□ -0.29
SFB2P53953 BSC6YOL137W 1494 nt13.26□□□□□ -0.29
SFB2P53953 RPP2BYDR382W 333 nt13.22□□□□□ -0.29
SFB2P53953 RKM5YLR137W 1104 nt13.22□□□□□ -0.29
SFB2P53953 YJR120WYJR120W 351 nt13.18□□□□□ -0.3
SFB2P53953 YFL021C-AYFL021C-A 855 nt13.16□□□□□ -0.3
SFB2P53953 YHR049C-AYHR049C-A 297 nt13.13□□□□□ -0.31
SFB2P53953 BDF1YLR399C 2061 nt13.12□□□□□ -0.31
SFB2P53953 PUS2YGL063W 1113 nt13.08□□□□□ -0.32
SFB2P53953 YLR281CYLR281C 468 nt13.05□□□□□ -0.32
SFB2P53953 BDH2YAL061W 1254 nt13.02□□□□□ -0.33
SFB2P53953 MOT3YMR070W 1473 nt13.01□□□□□ -0.33
SFB2P53953 PTC2YER089C 1395 nt13□□□□□ -0.33
SFB2P53953 LSM3YLR438C-A 270 nt12.96□□□□□ -0.33
SFB2P53953 Q0182Q0182 405 nt12.95□□□□□ -0.34
SFB2P53953 WHI5YOR083W 888 nt12.94□□□□□ -0.34
SFB2P53953 TAT1YBR069C 1860 nt12.92□□□□□ -0.34
SFB2P53953 PAC11YDR488C 1602 nt12.82□□□□□ -0.36
SFB2P53953 INM2YDR287W 879 nt12.82□□□□□ -0.36
SFB2P53953 NAB2YGL122C 1578 nt12.78□□□□□ -0.36
SFB2P53953 YBL100CYBL100C 315 nt12.75□□□□□ -0.37
SFB2P53953 FMP45YDL222C 930 nt12.73□□□□□ -0.37
SFB2P53953 BUD23YCR047C 828 nt12.72□□□□□ -0.37
SFB2P53953 DSK2YMR276W 1122 nt12.72□□□□□ -0.37
SFB2P53953 MRPL8YJL063C 717 nt12.71□□□□□ -0.37
SFB2P53953 TRM9YML014W 840 nt12.71□□□□□ -0.37
SFB2P53953 DAL1YIR027C 1383 nt12.7□□□□□ -0.38
SFB2P53953 IMP2'YIL154C 1041 nt12.69□□□□□ -0.38
SFB2P53953 YPR011CYPR011C 981 nt12.69□□□□□ -0.38
SFB2P53953 FPR4YLR449W 1179 nt12.67□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms