RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	PSP2	P50109	593 aa	Known RBP	4.91	□□□□□ -1.62
PAN1	YIR006C	MDR1	P53258	950 aa		4.91	□□□□□ -1.62
PAN1	YIR006C	ADA2	Q02336	434 aa		4.91	□□□□□ -1.62
PAN1	YIR006C	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
PAN1	YIR006C	YRF1-2	P40105	1681 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	PHO8	P11491	566 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	HIR1	P32479	840 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	SEC6	P32844	805 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	BDF1	P35817	686 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	EXO5	P38289	585 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	MPH1	P40562	993 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	TRF5	P48561	642 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	OYE2	Q03558	400 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	FUS2	Q05670	677 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	YLR407W	Q06070	228 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	YLL054C	Q12244	843 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	RPL6B	P05739	176 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	TIF1	P10081	395 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	SRV2	P17555	526 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	PAP1	P29468	568 aa	Known RBP	4.9	□□□□□ -1.62
PAN1	YIR006C	NGG1	P32494	702 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	EPS1	P40557	701 aa		4.9	□□□□□ -1.62
PAN1	YIR006C	KAR4	P25583	335 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	PSY4	P38193	441 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	GEM1	P39722	662 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	UTP22	P53254	1237 aa	Predicted RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	PPM2	Q08282	695 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	NYV1	Q12255	253 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	CHO2	P05374	869 aa	Known RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	MIS1	P09440	975 aa	Known RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	KGD2	P19262	463 aa	Predicted RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	YSW1	P38280	609 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	DOT5	P40553	215 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	CIT3	P43635	486 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	CTK3	P46963	296 aa	Predicted RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	SYH1	Q02875	849 aa	Known RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	SHE9	Q04172	456 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	IVY1	Q04934	453 aa		4.9	□□□□□ -1.63
PAN1	YIR006C	NEW1	Q08972	1196 aa	Known RBP	4.9	□□□□□ -1.63
PAN1	YIR006C	ATP4	P05626	244 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	SLY1	P22213	666 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	PRE8	P23639	250 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	ETP1	P38748	585 aa	Known RBP	4.89	□□□□□ -1.63
PAN1	YIR006C	ERP5	P38819	212 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	NOG2	P53742	486 aa	Known RBP	4.89	□□□□□ -1.63
PAN1	YIR006C	YDR476C	Q03362	224 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	VPS3	P23643	1011 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	TGL4	P36165	910 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	KTR3	P38130	404 aa	Predicted RBP	4.89	□□□□□ -1.63
PAN1	YIR006C	SLI15	P38283	698 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	YMR134W	P40207	237 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	YNL035C	P53962	389 aa	Known RBP	4.89	□□□□□ -1.63
PAN1	YIR006C	YMR027W	Q04371	470 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	SHS1	Q07657	551 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	DSE3	Q08729	430 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	YLR053C	Q12026	108 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	PRP16	P15938	1071 aa	Predicted RBP	4.89	□□□□□ -1.63
PAN1	YIR006C	ADP1	P25371	1049 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	RAD51	P25454	400 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	APM2	P38700	605 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	EAF5	P39995	279 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	CNN1	P43618	361 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	FMS1	P50264	508 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	ALT2	P52892	507 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	RTA1	P53047	317 aa		4.89	□□□□□ -1.63
PAN1	YIR006C	PYC1	P11154	1178 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	GAL2	P13181	574 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	SAM2	P19358	384 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	EXO84	P38261	753 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YHL008C	P38750	627 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	LYS14	P40971	790 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	SXM1	Q04175	944 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	SPO20	Q04359	397 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	PPR1	P07272	904 aa	Predicted RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	SEC21	P32074	935 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	ACF4	P47129	309 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	ATP25	Q03153	612 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YLR297W	Q05899	129 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	NOP6	Q07623	225 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	CMS1	Q07897	291 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	SGT1	Q08446	395 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	URB1	P34241	1764 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	RAD3	P06839	778 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	RPB4	P20433	221 aa	Predicted RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	STE11	P23561	717 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	RPS7A	P26786	190 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	MUD1	P32605	298 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	KTR2	P33550	425 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	TRM5	P38793	499 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	KEL1	P38853	1164 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	YER156C	P40093	338 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	GVP36	P40531	326 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	UPF3	P48412	387 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	RMR1	P53060	241 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	BNI4	P53858	892 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YOL075C	Q08234	1294 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	RRP36	Q12481	300 aa	Predicted RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	TY1B-A	O13527	1196 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	PCK1	P10963	549 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms