RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C DRS1P32892 752 aaKnown RBP6.94□□□□□ -1.3
PAN1YIR006C SGS1P35187 1447 aa6.7□□□□□ -1.34
PAN1YIR006C SPA2P23201 1466 aaKnown RBP6.68□□□□□ -1.34
PAN1YIR006C SAS10Q12136 610 aaPredicted RBP6.65□□□□□ -1.34
PAN1YIR006C RQC2Q12532 1038 aaKnown RBP6.57□□□□□ -1.36
PAN1YIR006C TAF7Q05021 590 aa6.47□□□□□ -1.37
PAN1YIR006C SKI3P17883 1432 aaKnown RBP6.45□□□□□ -1.38
PAN1YIR006C SSN2P38931 1420 aa6.45□□□□□ -1.38
PAN1YIR006C MTC1P47018 478 aaKnown RBP6.41□□□□□ -1.38
PAN1YIR006C IFH1P39520 1085 aa6.4□□□□□ -1.38
PAN1YIR006C TFA1P36100 482 aa6.4□□□□□ -1.38
PAN1YIR006C NOP2P40991 618 aaKnown RBP6.31□□□□□ -1.4
PAN1YIR006C BFR2Q06631 534 aaKnown RBP6.31□□□□□ -1.4
PAN1YIR006C TAF2P23255 1407 aa6.31□□□□□ -1.4
PAN1YIR006C POL5P39985 1022 aaKnown RBP6.3□□□□□ -1.4
PAN1YIR006C INO80P53115 1489 aa6.29□□□□□ -1.4
PAN1YIR006C LEU3P08638 886 aa6.27□□□□□ -1.41
PAN1YIR006C RTT106P40161 455 aa6.26□□□□□ -1.41
PAN1YIR006C NOP7P53261 605 aaKnown RBP6.25□□□□□ -1.41
PAN1YIR006C PAF1P38351 445 aa6.23□□□□□ -1.41
PAN1YIR006C MNN4P36044 1178 aa6.22□□□□□ -1.41
PAN1YIR006C ORC1P54784 914 aaPredicted RBP6.21□□□□□ -1.42
PAN1YIR006C CHD1P32657 1468 aa6.19□□□□□ -1.42
PAN1YIR006C FPR3P38911 411 aaKnown RBP6.18□□□□□ -1.42
PAN1YIR006C SCT1P32784 759 aa6.16□□□□□ -1.42
PAN1YIR006C TCB3Q03640 1545 aaKnown RBP6.15□□□□□ -1.42
PAN1YIR006C CKB1P43639 278 aa6.13□□□□□ -1.43
PAN1YIR006C RSE1Q04693 1361 aaKnown RBP6.11□□□□□ -1.43
PAN1YIR006C NSR1P27476 414 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
PAN1YIR006C ENP1P38333 483 aaKnown RBP6.09□□□□□ -1.43
PAN1YIR006C YTA7P40340 1379 aa6.06□□□□□ -1.44
PAN1YIR006C SPT6P23615 1451 aaKnown RBP6.05□□□□□ -1.44
PAN1YIR006C STH1P32597 1359 aa6.05□□□□□ -1.44
PAN1YIR006C EAF7P53911 425 aaKnown RBP6.05□□□□□ -1.44
PAN1YIR006C MMS22Q06164 1454 aa6.04□□□□□ -1.44
PAN1YIR006C XRN1P22147 1528 aaKnown RBP6.04□□□□□ -1.44
PAN1YIR006C NAP1P25293 417 aaKnown RBP6.04□□□□□ -1.44
PAN1YIR006C BUD21Q08492 214 aaPredicted RBP6.04□□□□□ -1.44
PAN1YIR006C SEC3P33332 1336 aaKnown RBP6.03□□□□□ -1.44
PAN1YIR006C BUD4P47136 1447 aa6.01□□□□□ -1.45
PAN1YIR006C UFD4P33202 1483 aa6.01□□□□□ -1.45
PAN1YIR006C PAN1P32521 1480 aa5.99□□□□□ -1.45
PAN1YIR006C SMC4Q12267 1418 aa5.99□□□□□ -1.45
PAN1YIR006C CAB3P36076 571 aa5.97□□□□□ -1.45
PAN1YIR006C IKI3Q06706 1349 aaKnown RBP5.94□□□□□ -1.46
PAN1YIR006C AIM44Q99299 758 aa5.94□□□□□ -1.46
PAN1YIR006C TY1B-DR4Q07793 1604 aa5.92□□□□□ -1.46
PAN1YIR006C MON2P48563 1636 aaPredicted RBP5.92□□□□□ -1.46
PAN1YIR006C SPT7P35177 1332 aa5.91□□□□□ -1.46
PAN1YIR006C NUP170P38181 1502 aa5.89□□□□□ -1.47
PAN1YIR006C YFR016CP43597 1233 aaKnown RBP5.89□□□□□ -1.47
PAN1YIR006C ECM5Q03214 1411 aa5.87□□□□□ -1.47
PAN1YIR006C PAP2P53632 584 aaKnown RBP5.87□□□□□ -1.47
PAN1YIR006C EBP2P36049 427 aaKnown RBP5.87□□□□□ -1.47
PAN1YIR006C STU1P38198 1513 aa5.86□□□□□ -1.47
PAN1YIR006C TAF5P38129 798 aa5.86□□□□□ -1.47
PAN1YIR006C SPP41P38904 1435 aa5.86□□□□□ -1.47
PAN1YIR006C PDS5Q04264 1277 aa5.85□□□□□ -1.47
PAN1YIR006C SIN3P22579 1536 aa5.85□□□□□ -1.47
PAN1YIR006C HSL1P34244 1518 aa5.84□□□□□ -1.47
PAN1YIR006C FUN12P39730 1002 aaKnown RBP5.83□□□□□ -1.48
PAN1YIR006C THO2P53552 1597 aaKnown RBP5.83□□□□□ -1.48
PAN1YIR006C YRB30P53107 440 aaPredicted RBP5.83□□□□□ -1.48
PAN1YIR006C TRM732Q03496 1420 aa5.82□□□□□ -1.48
PAN1YIR006C RPC31P17890 251 aa5.82□□□□□ -1.48
PAN1YIR006C KIP3P53086 805 aaKnown RBP5.82□□□□□ -1.48
PAN1YIR006C PSD2P53037 1138 aaKnown RBP5.81□□□□□ -1.48
PAN1YIR006C MRX12P47084 519 aa5.81□□□□□ -1.48
PAN1YIR006C KRI1P42846 591 aaKnown RBP5.8□□□□□ -1.48
PAN1YIR006C COG8Q04632 607 aa5.8□□□□□ -1.48
PAN1YIR006C URN1Q06525 465 aaKnown RBP5.8□□□□□ -1.48
PAN1YIR006C RAD2P07276 1031 aa5.8□□□□□ -1.48
PAN1YIR006C LEO1P38439 464 aa5.8□□□□□ -1.48
PAN1YIR006C SIS2P36024 562 aa5.79□□□□□ -1.48
PAN1YIR006C SSK2P53599 1579 aa5.79□□□□□ -1.48
PAN1YIR006C ESL2P36168 1195 aa5.78□□□□□ -1.48
PAN1YIR006C REV3P14284 1504 aa5.78□□□□□ -1.48
PAN1YIR006C SWR1Q05471 1514 aa5.78□□□□□ -1.48
PAN1YIR006C NOP8Q08287 484 aaPredicted RBP5.77□□□□□ -1.49
PAN1YIR006C MET10P39692 1035 aa5.77□□□□□ -1.49
PAN1YIR006C PEP1P32319 1579 aa5.77□□□□□ -1.49
PAN1YIR006C KAR2P16474 682 aaKnown RBP5.76□□□□□ -1.49
PAN1YIR006C HIR3P47171 1648 aa5.76□□□□□ -1.49
PAN1YIR006C SSM4P40318 1319 aa5.76□□□□□ -1.49
PAN1YIR006C MLP2P40457 1679 aa5.76□□□□□ -1.49
PAN1YIR006C MYO2P19524 1574 aaKnown RBP5.75□□□□□ -1.49
PAN1YIR006C CDC45Q08032 650 aa5.75□□□□□ -1.49
PAN1YIR006C YDL144CQ07589 356 aa5.73□□□□□ -1.49
PAN1YIR006C RTR1P40084 226 aaPredicted RBP5.73□□□□□ -1.49
PAN1YIR006C RTF1P53064 558 aa5.73□□□□□ -1.49
PAN1YIR006C POL1P13382 1468 aa5.72□□□□□ -1.49
PAN1YIR006C ESC2Q06340 456 aa5.72□□□□□ -1.49
PAN1YIR006C GEA1P47102 1408 aaPredicted RBP5.72□□□□□ -1.49
PAN1YIR006C CHZ1P40019 153 aaPredicted RBP5.72□□□□□ -1.49
PAN1YIR006C SPE2P21182 396 aa5.71□□□□□ -1.49
PAN1YIR006C VPS27P40343 622 aaKnown RBP5.71□□□□□ -1.49
PAN1YIR006C YGL081WP53156 320 aa5.71□□□□□ -1.49
PAN1YIR006C MHP1P43638 1398 aa5.71□□□□□ -1.49
PAN1YIR006C CLC1P17891 233 aa5.71□□□□□ -1.5
PAN1YIR006C MAK21Q12176 1025 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms