RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG11	YPR049C	HRK1	Q08732	759 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	TRM11	Q12463	433 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	RPP0	P05317	312 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	UTR4	P32626	227 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	GSM1	P42950	618 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	SPO74	P45819	413 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	YNL011C	P53980	444 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	MSH6	Q03834	1242 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	SSL1	Q04673	461 aa	Predicted RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	UTP4	Q06679	776 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	ELG1	Q12050	791 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	GPM1	P00950	247 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	SWI6	P09959	803 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	SHM1	P37292	490 aa	Predicted RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	NMD3	P38861	518 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	YCS4	Q06156	1176 aa		2.68	□□□□□ -1.98
ATG11	YPR049C	SPE3	Q12074	293 aa	Known RBP	2.68	□□□□□ -1.98
ATG11	YPR049C	LEU1	P07264	779 aa	Known RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	ENA1	P13587	1091 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PDC5	P16467	563 aa	Known RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	PRI2	P20457	528 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PRE8	P23639	250 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	GCD7	P32502	381 aa	Predicted RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	ENA2	Q01896	1091 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PDS5	Q04264	1277 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	YOR223W	Q12015	292 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	ENA5	Q12691	1091 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	DAL5	P15365	543 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	CAD1	P24813	409 aa	Known RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	SAP190	P36123	1033 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	YBL028C	P38202	106 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PAN5	P38787	379 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	YNR040W	P53736	256 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	MDM1	Q01846	1127 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	MSD1	P15179	658 aa	Known RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	RIP-Chip
ATG11	YPR049C	HCM1	P25364	564 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PTK1	P36002	662 aa	Predicted RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	GPT2	P36148	743 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	GTS1	P40956	396 aa		2.67	□□□□□ -1.98
ATG11	YPR049C	PTA1	Q01329	785 aa	Predicted RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	ESF1	Q06344	628 aa	Known RBP	2.67	□□□□□ -1.98
ATG11	YPR049C	RPS19A	P07280	144 aa	Known RBP	2.66	□□□□□ -1.98
ATG11	YPR049C	RPS19B	P07281	144 aa	Predicted RBP	2.66	□□□□□ -1.98
ATG11	YPR049C	TFC4	P33339	1025 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	FMP10	P40098	244 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	GIC2	Q06648	383 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	IRA2	P19158	3079 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	RAD18	P10862	487 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	CHS2	P14180	963 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	IMG2	P25642	146 aa	Predicted RBP	2.66	□□□□□ -1.98
ATG11	YPR049C	MCR1	P36060	302 aa	Known RBP	2.66	□□□□□ -1.98
ATG11	YPR049C	KAE1	P36132	386 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	RTP1	Q12751	981 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	IRA1	P18963	3092 aa		2.66	□□□□□ -1.98
ATG11	YPR049C	PPZ1	P26570	692 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	MCM4	P30665	933 aa	Known RBP	2.65	□□□□□ -1.98
ATG11	YPR049C	UGA4	P32837	571 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	RFS1	P38234	210 aa	Known RBP	2.65	□□□□□ -1.98
ATG11	YPR049C	YAR028W	P39548	234 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	BUD16	P39988	312 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	YER158C	P40095	573 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	VTC4	P47075	721 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	AZR1	P50080	613 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	YGR130C	P53278	816 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	OSH2	Q12451	1283 aa		2.65	□□□□□ -1.98
ATG11	YPR049C	FUS1	P11710	512 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	SEC18	P18759	758 aa	Known RBP	2.65	□□□□□ -1.99
ATG11	YPR049C	HXT5	P38695	592 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	SAH1	P39954	449 aa	Known RBP	2.65	□□□□□ -1.99
ATG11	YPR049C	NTA1	P40354	457 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	VPS64	Q03944	604 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	PIG1	Q06216	648 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	YDL124W	Q07551	312 aa	Known RBP	2.65	□□□□□ -1.99
ATG11	YPR049C	YDR461C-A	Q2V2P7	80 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	LSO1	Q3E827	93 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	VAC8	P39968	578 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	IOC3	P43596	787 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	SEN54	Q02825	467 aa	Predicted RBP	2.65	□□□□□ -1.99
ATG11	YPR049C	EST2	Q06163	884 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	RTT109	Q07794	436 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	TY1A-DR3	Q12441	440 aa		2.65	□□□□□ -1.99
ATG11	YPR049C	PYC2	P32327	1180 aa	Known RBP	2.64	□□□□□ -1.99
ATG11	YPR049C	PHO88	P38264	188 aa	Predicted RBP	2.64	□□□□□ -1.99
ATG11	YPR049C	PEX28	P38848	579 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	DSE4	P53753	1117 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	ACO2	P39533	789 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	YIL165C	P40446	119 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	CIT3	P43635	486 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	PUS2	P53167	370 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	MFB1	Q04922	465 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	YLR455W	Q06188	304 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	MSC6	Q08818	692 aa	Known RBP	2.64	□□□□□ -1.99
ATG11	YPR049C	TKL1	P23254	680 aa	Known RBP	2.64	□□□□□ -1.99
ATG11	YPR049C	PRO1	P32264	428 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	VPS35	P34110	944 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	FUN12	P39730	1002 aa	Known RBP	2.64	□□□□□ -1.99
ATG11	YPR049C	ENV11	P53246	860 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	CDC55	Q00362	526 aa		2.64	□□□□□ -1.99
ATG11	YPR049C	EMI2	Q04409	500 aa	Known RBP	2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 100.9 ms