Protein–RNA interactions for Protein: P53736

YNR040W, Uncharacterized protein YNR040W, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNR040WP53736 YML009W-BYML009W-B 477 nt18.13■□□□□ 0.49
YNR040WP53736 NSR1YGR159C 1245 nt17.92■□□□□ 0.46
YNR040WP53736 NOP1YDL014W 984 nt17.67■□□□□ 0.42
YNR040WP53736 YKL036CYKL036C 393 nt16.45■□□□□ 0.22
YNR040WP53736 MDJ1YFL016C 1536 nt15.78■□□□□ 0.12
YNR040WP53736 Q0297Q0297 156 nt15.55■□□□□ 0.08
YNR040WP53736 SRX1YKL086W 384 nt15.47■□□□□ 0.07
YNR040WP53736 YJL027CYJL027C 417 nt15.37■□□□□ 0.05
YNR040WP53736 SCS3YGL126W 1143 nt15.05■□□□□ -0
YNR040WP53736 YCR051WYCR051W 669 nt14.66□□□□□ -0.06
YNR040WP53736 YOL085CYOL085C 342 nt14.26□□□□□ -0.13
YNR040WP53736 DBP2YNL112W 1641 nt14.05□□□□□ -0.16
YNR040WP53736 PKP1YIL042C 1185 nt14.02□□□□□ -0.17
YNR040WP53736 RPP1BYDL130W 321 nt13.94□□□□□ -0.18
YNR040WP53736 TRN1tP(UGG)A 72 nt13.92□□□□□ -0.18
YNR040WP53736 SUF9tP(UGG)F 72 nt13.92□□□□□ -0.18
YNR040WP53736 SUF8tP(UGG)H 72 nt13.92□□□□□ -0.18
YNR040WP53736 tP(UGG)LtP(UGG)L 72 nt13.92□□□□□ -0.18
YNR040WP53736 SUF7tP(UGG)M 72 nt13.92□□□□□ -0.18
YNR040WP53736 tP(UGG)N1tP(UGG)N1 72 nt13.92□□□□□ -0.18
YNR040WP53736 tP(UGG)N2tP(UGG)N2 72 nt13.92□□□□□ -0.18
YNR040WP53736 tP(UGG)O1tP(UGG)O1 72 nt13.92□□□□□ -0.18
YNR040WP53736 SUF11tP(UGG)O2 72 nt13.92□□□□□ -0.18
YNR040WP53736 CCC1YLR220W 969 nt13.75□□□□□ -0.21
YNR040WP53736 ATS1YAL020C 1002 nt13.5□□□□□ -0.25
YNR040WP53736 SCJ1YMR214W 1134 nt13.5□□□□□ -0.25
YNR040WP53736 Q0182Q0182 405 nt13.47□□□□□ -0.25
YNR040WP53736 YBR190WYBR190W 312 nt13.42□□□□□ -0.26
YNR040WP53736 MOT3YMR070W 1473 nt13.42□□□□□ -0.26
YNR040WP53736 PET122YER153C 765 nt13.31□□□□□ -0.28
YNR040WP53736 tP(UGG)O3tP(UGG)O3 72 nt13.2□□□□□ -0.3
YNR040WP53736 RVS167YDR388W 1449 nt13.18□□□□□ -0.3
YNR040WP53736 SCR1SCR1 522 nt13.17□□□□□ -0.3
YNR040WP53736 RTC3YHR087W 336 nt13.1□□□□□ -0.31
YNR040WP53736 RRN5YLR141W 1092 nt12.95□□□□□ -0.34
YNR040WP53736 YDJ1YNL064C 1230 nt12.78□□□□□ -0.36
YNR040WP53736 SHR5YOL110W 714 nt12.78□□□□□ -0.36
YNR040WP53736 YER088W-BYER088W-B 147 nt12.69□□□□□ -0.38
YNR040WP53736 RSB1YOR049C 1065 nt12.69□□□□□ -0.38
YNR040WP53736 PST2YDR032C 597 nt12.5□□□□□ -0.41
YNR040WP53736 GAR1YHR089C 618 nt12.45□□□□□ -0.42
YNR040WP53736 DEP1YAL013W 1218 nt12.37□□□□□ -0.43
YNR040WP53736 YGR139WYGR139W 339 nt12.35□□□□□ -0.43
YNR040WP53736 URN1YPR152C 1398 nt12.33□□□□□ -0.44
YNR040WP53736 SSA3YBL075C 1950 nt12.25□□□□□ -0.45
YNR040WP53736 YNL208WYNL208W 600 nt12.18□□□□□ -0.46
YNR040WP53736 RPN10YHR200W 807 nt12.16□□□□□ -0.46
YNR040WP53736 OPI9YLR338W 858 nt12.15□□□□□ -0.46
YNR040WP53736 NME1NME1 340 nt12.11□□□□□ -0.47
YNR040WP53736 PUT4YOR348C 1884 nt12.1□□□□□ -0.47
YNR040WP53736 TIR1YER011W 765 nt12.04□□□□□ -0.48
YNR040WP53736 YKL097CYKL097C 411 nt12.04□□□□□ -0.48
YNR040WP53736 SAH1YER043C 1350 nt12.03□□□□□ -0.48
YNR040WP53736 SHU1YHL006C 453 nt11.95□□□□□ -0.5
YNR040WP53736 ARE1YCR048W 1833 nt11.93□□□□□ -0.5
YNR040WP53736 SSA1YAL005C 1929 nt11.88□□□□□ -0.51
YNR040WP53736 YJR018WYJR018W 363 nt11.78□□□□□ -0.52
YNR040WP53736 PUN1YLR414C 792 nt11.78□□□□□ -0.52
YNR040WP53736 YHR049C-AYHR049C-A 297 nt11.75□□□□□ -0.53
YNR040WP53736 SRB2YHR041C 633 nt11.73□□□□□ -0.53
YNR040WP53736 YAL037C-BYAL037C-B 975 nt11.72□□□□□ -0.53
YNR040WP53736 POA1YBR022W 534 nt11.71□□□□□ -0.53
YNR040WP53736 YJR120WYJR120W 351 nt11.68□□□□□ -0.54
YNR040WP53736 PTC2YER089C 1395 nt11.62□□□□□ -0.55
YNR040WP53736 YOR139CYOR139C 393 nt11.58□□□□□ -0.56
YNR040WP53736 RPP2BYDR382W 333 nt11.55□□□□□ -0.56
YNR040WP53736 WWM1YFL010C 636 nt11.54□□□□□ -0.56
YNR040WP53736 YGR021WYGR021W 873 nt11.49□□□□□ -0.57
YNR040WP53736 HOM6YJR139C 1080 nt11.48□□□□□ -0.57
YNR040WP53736 BUD23YCR047C 828 nt11.47□□□□□ -0.57
YNR040WP53736 MNP1YGL068W 585 nt11.44□□□□□ -0.58
YNR040WP53736 NAB2YGL122C 1578 nt11.44□□□□□ -0.58
YNR040WP53736 BSC6YOL137W 1494 nt11.44□□□□□ -0.58
YNR040WP53736 NPL3YDR432W 1245 nt11.4□□□□□ -0.58
YNR040WP53736 BDH2YAL061W 1254 nt11.38□□□□□ -0.59
YNR040WP53736 CSM2YIL132C 642 nt11.37□□□□□ -0.59
YNR040WP53736 INM2YDR287W 879 nt11.34□□□□□ -0.59
YNR040WP53736 YFL021C-AYFL021C-A 855 nt11.34□□□□□ -0.59
YNR040WP53736 DAL1YIR027C 1383 nt11.32□□□□□ -0.6
YNR040WP53736 FIS1YIL065C 468 nt11.32□□□□□ -0.6
YNR040WP53736 RKM5YLR137W 1104 nt11.31□□□□□ -0.6
YNR040WP53736 YOL037CYOL037C 354 nt11.29□□□□□ -0.6
YNR040WP53736 LSM3YLR438C-A 270 nt11.26□□□□□ -0.61
YNR040WP53736 FPR4YLR449W 1179 nt11.26□□□□□ -0.61
YNR040WP53736 SPT5YML010W 3192 nt11.25□□□□□ -0.61
YNR040WP53736 YBL100CYBL100C 315 nt11.25□□□□□ -0.61
YNR040WP53736 PHO4YFR034C 939 nt11.22□□□□□ -0.61
YNR040WP53736 FUN26YAL022C 1554 nt11.13□□□□□ -0.63
YNR040WP53736 tM(CAU)CtM(CAU)C 72 nt11.12□□□□□ -0.63
YNR040WP53736 IMT4tM(CAU)E 72 nt11.12□□□□□ -0.63
YNR040WP53736 IMT3tM(CAU)J3 72 nt11.12□□□□□ -0.63
YNR040WP53736 IMT1tM(CAU)O1 72 nt11.12□□□□□ -0.63
YNR040WP53736 IMT2tM(CAU)P 72 nt11.12□□□□□ -0.63
YNR040WP53736 TRM9YML014W 840 nt11.12□□□□□ -0.63
YNR040WP53736 PAU21YOR394W 495 nt11.08□□□□□ -0.64
YNR040WP53736 PAU22YPL282C 495 nt11.08□□□□□ -0.64
YNR040WP53736 YLR281CYLR281C 468 nt11.04□□□□□ -0.64
YNR040WP53736 SSA4YER103W 1929 nt11.03□□□□□ -0.64
YNR040WP53736 CCT6YDR188W 1641 nt11.02□□□□□ -0.65
YNR040WP53736 WHI5YOR083W 888 nt10.98□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 120.3 ms