Protein–RNA interactions for Protein: P39968

VAC8, Vacuolar protein 8, yeastyeast

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC8P39968 YML009W-BYML009W-B 477 nt21.03■□□□□ 0.96
VAC8P39968 NSR1YGR159C 1245 nt20.81■□□□□ 0.92
VAC8P39968 NOP1YDL014W 984 nt20.54■□□□□ 0.88
VAC8P39968 YKL036CYKL036C 393 nt19■□□□□ 0.63
VAC8P39968 MDJ1YFL016C 1536 nt18.33■□□□□ 0.53
VAC8P39968 Q0297Q0297 156 nt17.95■□□□□ 0.46
VAC8P39968 SRX1YKL086W 384 nt17.9■□□□□ 0.46
VAC8P39968 YJL027CYJL027C 417 nt17.77■□□□□ 0.44
VAC8P39968 SCS3YGL126W 1143 nt17.3■□□□□ 0.36
VAC8P39968 YCR051WYCR051W 669 nt17■□□□□ 0.31
VAC8P39968 YOL085CYOL085C 342 nt16.41■□□□□ 0.22
VAC8P39968 DBP2YNL112W 1641 nt16.21■□□□□ 0.19
VAC8P39968 PKP1YIL042C 1185 nt16.14■□□□□ 0.17
VAC8P39968 RPP1BYDL130W 321 nt16.11■□□□□ 0.17
VAC8P39968 TRN1tP(UGG)A 72 nt16.1■□□□□ 0.17
VAC8P39968 SUF9tP(UGG)F 72 nt16.1■□□□□ 0.17
VAC8P39968 SUF8tP(UGG)H 72 nt16.1■□□□□ 0.17
VAC8P39968 tP(UGG)LtP(UGG)L 72 nt16.1■□□□□ 0.17
VAC8P39968 SUF7tP(UGG)M 72 nt16.1■□□□□ 0.17
VAC8P39968 tP(UGG)N1tP(UGG)N1 72 nt16.1■□□□□ 0.17
VAC8P39968 tP(UGG)N2tP(UGG)N2 72 nt16.1■□□□□ 0.17
VAC8P39968 tP(UGG)O1tP(UGG)O1 72 nt16.1■□□□□ 0.17
VAC8P39968 SUF11tP(UGG)O2 72 nt16.1■□□□□ 0.17
VAC8P39968 CCC1YLR220W 969 nt15.95■□□□□ 0.14
VAC8P39968 YBR190WYBR190W 312 nt15.65■□□□□ 0.1
VAC8P39968 Q0182Q0182 405 nt15.51■□□□□ 0.07
VAC8P39968 ATS1YAL020C 1002 nt15.5■□□□□ 0.07
VAC8P39968 SCJ1YMR214W 1134 nt15.5■□□□□ 0.07
VAC8P39968 RVS167YDR388W 1449 nt15.43■□□□□ 0.06
VAC8P39968 PET122YER153C 765 nt15.35■□□□□ 0.05
VAC8P39968 RTC3YHR087W 336 nt15.34■□□□□ 0.05
VAC8P39968 SCR1SCR1 522 nt15.31■□□□□ 0.04
VAC8P39968 tP(UGG)O3tP(UGG)O3 72 nt15.27■□□□□ 0.04
VAC8P39968 MOT3YMR070W 1473 nt15.08■□□□□ 0
VAC8P39968 RRN5YLR141W 1092 nt14.92□□□□□ -0.02
VAC8P39968 SHR5YOL110W 714 nt14.86□□□□□ -0.03
VAC8P39968 YDJ1YNL064C 1230 nt14.79□□□□□ -0.04
VAC8P39968 RSB1YOR049C 1065 nt14.69□□□□□ -0.06
VAC8P39968 YER088W-BYER088W-B 147 nt14.62□□□□□ -0.07
VAC8P39968 GAR1YHR089C 618 nt14.43□□□□□ -0.1
VAC8P39968 URN1YPR152C 1398 nt14.36□□□□□ -0.11
VAC8P39968 DEP1YAL013W 1218 nt14.36□□□□□ -0.11
VAC8P39968 PST2YDR032C 597 nt14.32□□□□□ -0.12
VAC8P39968 RPN10YHR200W 807 nt14.26□□□□□ -0.13
VAC8P39968 YNL208WYNL208W 600 nt14.2□□□□□ -0.14
VAC8P39968 OPI9YLR338W 858 nt14.13□□□□□ -0.15
VAC8P39968 PUT4YOR348C 1884 nt14.06□□□□□ -0.16
VAC8P39968 SAH1YER043C 1350 nt13.99□□□□□ -0.17
VAC8P39968 TIR1YER011W 765 nt13.95□□□□□ -0.18
VAC8P39968 YKL097CYKL097C 411 nt13.87□□□□□ -0.19
VAC8P39968 ARE1YCR048W 1833 nt13.84□□□□□ -0.19
VAC8P39968 PUN1YLR414C 792 nt13.76□□□□□ -0.21
VAC8P39968 YJR018WYJR018W 363 nt13.72□□□□□ -0.21
VAC8P39968 SHU1YHL006C 453 nt13.71□□□□□ -0.21
VAC8P39968 YHR049C-AYHR049C-A 297 nt13.71□□□□□ -0.21
VAC8P39968 SSA1YAL005C 1929 nt13.7□□□□□ -0.22
VAC8P39968 POA1YBR022W 534 nt13.65□□□□□ -0.22
VAC8P39968 RPP2BYDR382W 333 nt13.54□□□□□ -0.24
VAC8P39968 PTC2YER089C 1395 nt13.53□□□□□ -0.24
VAC8P39968 YAL037C-BYAL037C-B 975 nt13.46□□□□□ -0.25
VAC8P39968 BUD23YCR047C 828 nt13.43□□□□□ -0.26
VAC8P39968 YJR120WYJR120W 351 nt13.43□□□□□ -0.26
VAC8P39968 SRB2YHR041C 633 nt13.42□□□□□ -0.26
VAC8P39968 NAB2YGL122C 1578 nt13.37□□□□□ -0.27
VAC8P39968 YGR021WYGR021W 873 nt13.36□□□□□ -0.27
VAC8P39968 BSC6YOL137W 1494 nt13.34□□□□□ -0.27
VAC8P39968 WWM1YFL010C 636 nt13.32□□□□□ -0.28
VAC8P39968 INM2YDR287W 879 nt13.25□□□□□ -0.29
VAC8P39968 HOM6YJR139C 1080 nt13.24□□□□□ -0.29
VAC8P39968 BDH2YAL061W 1254 nt13.23□□□□□ -0.29
VAC8P39968 YOR139CYOR139C 393 nt13.21□□□□□ -0.29
VAC8P39968 DAL1YIR027C 1383 nt13.2□□□□□ -0.3
VAC8P39968 FPR4YLR449W 1179 nt13.19□□□□□ -0.3
VAC8P39968 NPL3YDR432W 1245 nt13.18□□□□□ -0.3
VAC8P39968 MNP1YGL068W 585 nt13.18□□□□□ -0.3
VAC8P39968 YFL021C-AYFL021C-A 855 nt13.16□□□□□ -0.3
VAC8P39968 FIS1YIL065C 468 nt13.14□□□□□ -0.31
VAC8P39968 YBL100CYBL100C 315 nt13.12□□□□□ -0.31
VAC8P39968 LSM3YLR438C-A 270 nt13.09□□□□□ -0.31
VAC8P39968 YOL037CYOL037C 354 nt13.08□□□□□ -0.32
VAC8P39968 PHO4YFR034C 939 nt13.06□□□□□ -0.32
VAC8P39968 RKM5YLR137W 1104 nt13.06□□□□□ -0.32
VAC8P39968 SSA3YBL075C 1950 nt13.03□□□□□ -0.32
VAC8P39968 TRM9YML014W 840 nt12.98□□□□□ -0.33
VAC8P39968 FUN26YAL022C 1554 nt12.94□□□□□ -0.34
VAC8P39968 CCT6YDR188W 1641 nt12.81□□□□□ -0.36
VAC8P39968 ALF1YNL148C 765 nt12.81□□□□□ -0.36
VAC8P39968 SUF2tP(AGG)C 72 nt12.76□□□□□ -0.37
VAC8P39968 SUF10tP(AGG)N 72 nt12.76□□□□□ -0.37
VAC8P39968 YPS1YLR120C 1710 nt12.76□□□□□ -0.37
VAC8P39968 YDR095CYDR095C 411 nt12.71□□□□□ -0.37
VAC8P39968 YLR281CYLR281C 468 nt12.71□□□□□ -0.37
VAC8P39968 tM(CAU)CtM(CAU)C 72 nt12.7□□□□□ -0.38
VAC8P39968 IMT4tM(CAU)E 72 nt12.7□□□□□ -0.38
VAC8P39968 IMT3tM(CAU)J3 72 nt12.7□□□□□ -0.38
VAC8P39968 IMT1tM(CAU)O1 72 nt12.7□□□□□ -0.38
VAC8P39968 IMT2tM(CAU)P 72 nt12.7□□□□□ -0.38
VAC8P39968 YHR165W-AYHR165W-A 312 nt12.66□□□□□ -0.38
VAC8P39968 WHI5YOR083W 888 nt12.66□□□□□ -0.38
VAC8P39968 PUS2YGL063W 1113 nt12.63□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 112.8 ms