RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATR1	YML116W	YGR035C	P53222	116 aa		6.24	□□□□□ -1.41
ATR1	YML116W	YNR063W	P53749	607 aa		6.24	□□□□□ -1.41
ATR1	YML116W	GAL1	P04385	528 aa		6.23	□□□□□ -1.41
ATR1	YML116W	RAD53	P22216	821 aa		6.23	□□□□□ -1.41
ATR1	YML116W	SYP1	P25623	870 aa	Known RBP	6.23	□□□□□ -1.41
ATR1	YML116W	UBP6	P43593	499 aa	Known RBP	6.23	□□□□□ -1.41
ATR1	YML116W	MET13	P53128	600 aa		6.23	□□□□□ -1.41
ATR1	YML116W	HFD1	Q04458	532 aa		6.23	□□□□□ -1.41
ATR1	YML116W	CDC9	P04819	755 aa		6.22	□□□□□ -1.41
ATR1	YML116W	MCM7	P38132	845 aa		6.22	□□□□□ -1.41
ATR1	YML116W	EXO84	P38261	753 aa		6.22	□□□□□ -1.41
ATR1	YML116W	RAD9	P14737	1309 aa		6.22	□□□□□ -1.41
ATR1	YML116W	RAD18	P10862	487 aa		6.21	□□□□□ -1.41
ATR1	YML116W	APA1	P16550	321 aa	Known RBP	6.21	□□□□□ -1.41
ATR1	YML116W	DBP5	P20449	482 aa	Known RBP	6.21	□□□□□ -1.41
ATR1	YML116W	MAE1	P36013	669 aa	Known RBP	6.21	□□□□□ -1.41
ATR1	YML116W	SIP5	P40210	489 aa	Known RBP	6.21	□□□□□ -1.41
ATR1	YML116W	YGR045C	P53229	120 aa		6.21	□□□□□ -1.41
ATR1	YML116W	RKM2	Q03942	479 aa		6.21	□□□□□ -1.41
ATR1	YML116W	YMR074C	Q04773	145 aa		6.21	□□□□□ -1.41
ATR1	YML116W	SRD1	P09007	221 aa		6.21	□□□□□ -1.42
ATR1	YML116W	GSY1	P23337	708 aa		6.21	□□□□□ -1.42
ATR1	YML116W	HSP78	P33416	811 aa		6.21	□□□□□ -1.42
ATR1	YML116W	SAH1	P39954	449 aa	Known RBP	6.21	□□□□□ -1.42
ATR1	YML116W	SBE2	P42223	864 aa	Known RBP	6.21	□□□□□ -1.42
ATR1	YML116W	YDR306C	Q06640	478 aa		6.21	□□□□□ -1.42
ATR1	YML116W	YPR071W	Q12346	211 aa		6.21	□□□□□ -1.42
ATR1	YML116W	RAV1	P47104	1357 aa		6.21	□□□□□ -1.42
ATR1	YML116W	ALG3	P38179	458 aa		6.2	□□□□□ -1.42
ATR1	YML116W	RRM3	P38766	723 aa		6.2	□□□□□ -1.42
ATR1	YML116W	YAR028W	P39548	234 aa		6.2	□□□□□ -1.42
ATR1	YML116W	CNN1	P43618	361 aa		6.2	□□□□□ -1.42
ATR1	YML116W	YJR096W	P47137	282 aa		6.2	□□□□□ -1.42
ATR1	YML116W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
ATR1	YML116W	NFU1	P32860	256 aa		6.19	□□□□□ -1.42
ATR1	YML116W	MRS6	P32864	603 aa	Known RBP	6.19	□□□□□ -1.42
ATR1	YML116W	DOM34	P33309	386 aa		6.19	□□□□□ -1.42
ATR1	YML116W	MFT1	P33441	392 aa	Known RBP	6.19	□□□□□ -1.42
ATR1	YML116W	PET10	P36139	283 aa		6.19	□□□□□ -1.42
ATR1	YML116W	TRZ1	P36159	838 aa	Predicted RBP	6.19	□□□□□ -1.42
ATR1	YML116W	ERT1	P38140	529 aa		6.19	□□□□□ -1.42
ATR1	YML116W	MPH1	P40562	993 aa		6.19	□□□□□ -1.42
ATR1	YML116W	DSE4	P53753	1117 aa		6.19	□□□□□ -1.42
ATR1	YML116W	PCL2	P25693	308 aa		6.18	□□□□□ -1.42
ATR1	YML116W	DAL3	P32459	195 aa		6.18	□□□□□ -1.42
ATR1	YML116W	PRP19	P32523	503 aa	Known RBP	6.18	□□□□□ -1.42
ATR1	YML116W	ALG2	P43636	503 aa		6.18	□□□□□ -1.42
ATR1	YML116W	ELA1	P53861	379 aa	Predicted RBP	6.18	□□□□□ -1.42
ATR1	YML116W	GAS5	Q08193	484 aa		6.18	□□□□□ -1.42
ATR1	YML116W	AVO1	Q08236	1176 aa		6.18	□□□□□ -1.42
ATR1	YML116W	TY1A-NL1	Q12391	440 aa	Known RBP	6.18	□□□□□ -1.42
ATR1	YML116W	PTP2	P29461	750 aa		6.17	□□□□□ -1.42
ATR1	YML116W	NIC96	P34077	839 aa		6.17	□□□□□ -1.42
ATR1	YML116W	YAP1801	P38856	637 aa		6.17	□□□□□ -1.42
ATR1	YML116W	HOS4	P40480	1083 aa		6.17	□□□□□ -1.42
ATR1	YML116W	RSC8	P43609	557 aa	Known RBP	6.17	□□□□□ -1.42
ATR1	YML116W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.17	□□□□□ -1.42	not detected
ATR1	YML116W	NCE103	P53615	221 aa		6.17	□□□□□ -1.42
ATR1	YML116W	ESF2	P53743	316 aa	Known RBP	6.17	□□□□□ -1.42
ATR1	YML116W	YOR223W	Q12015	292 aa		6.17	□□□□□ -1.42
ATR1	YML116W	YLL054C	Q12244	843 aa		6.17	□□□□□ -1.42
ATR1	YML116W	PTC5	Q12511	572 aa		6.17	□□□□□ -1.42
ATR1	YML116W	SFL1	P20134	766 aa		6.17	□□□□□ -1.42
ATR1	YML116W	MLS1	P30952	554 aa		6.17	□□□□□ -1.42
ATR1	YML116W	AAR2	P32357	355 aa	Predicted RBP	6.17	□□□□□ -1.42
ATR1	YML116W	KTR4	P38131	464 aa		6.17	□□□□□ -1.42
ATR1	YML116W	ATG14	P38270	344 aa		6.17	□□□□□ -1.42
ATR1	YML116W	RPT2	P40327	437 aa	Known RBP	6.17	□□□□□ -1.42
ATR1	YML116W	MDM1	Q01846	1127 aa		6.17	□□□□□ -1.42
ATR1	YML116W	ERP4	Q12450	207 aa		6.17	□□□□□ -1.42
ATR1	YML116W	ENT1	Q12518	454 aa		6.17	□□□□□ -1.42
ATR1	YML116W	RRP8	P38961	392 aa	Known RBP	6.16	□□□□□ -1.42
ATR1	YML116W	YFL066C	P43538	392 aa		6.16	□□□□□ -1.42
ATR1	YML116W	NIT2	P47016	307 aa		6.16	□□□□□ -1.42
ATR1	YML116W	YNR014W	P53719	212 aa		6.16	□□□□□ -1.42
ATR1	YML116W	DOT1	Q04089	582 aa	Known RBP	6.16	□□□□□ -1.42
ATR1	YML116W	RRI2	Q12348	645 aa		6.16	□□□□□ -1.42
ATR1	YML116W	AI1	P03875	834 aa		6.15	□□□□□ -1.42
ATR1	YML116W	SSH4	P32343	579 aa		6.15	□□□□□ -1.42
ATR1	YML116W	OAF1	P39720	1047 aa	Predicted RBP	6.15	□□□□□ -1.42
ATR1	YML116W	LAP2	Q10740	671 aa		6.15	□□□□□ -1.42
ATR1	YML116W	RRP6	Q12149	733 aa	Known RBP	6.15	□□□□□ -1.42
ATR1	YML116W	URB1	P34241	1764 aa	Known RBP	6.15	□□□□□ -1.43
ATR1	YML116W	FKS3	Q04952	1785 aa		6.15	□□□□□ -1.43
ATR1	YML116W	RTC1	Q08281	1341 aa		6.15	□□□□□ -1.43
ATR1	YML116W	KCC4	P25389	1037 aa		6.14	□□□□□ -1.43
ATR1	YML116W	TRK2	P28584	889 aa		6.14	□□□□□ -1.43
ATR1	YML116W	SPC29	P33419	253 aa		6.14	□□□□□ -1.43
ATR1	YML116W	RGD1	P38339	666 aa		6.14	□□□□□ -1.43
ATR1	YML116W	QNS1	P38795	714 aa	Known RBP	6.14	□□□□□ -1.43
ATR1	YML116W	UBA2	P52488	636 aa		6.14	□□□□□ -1.43
ATR1	YML116W	BUD9	P53226	547 aa		6.14	□□□□□ -1.43
ATR1	YML116W	PBP1	P53297	722 aa	Known RBP	6.14	□□□□□ -1.43
ATR1	YML116W	YML131W	Q03102	365 aa		6.14	□□□□□ -1.43
ATR1	YML116W	RSA3	Q05942	220 aa	Known RBP	6.14	□□□□□ -1.43
ATR1	YML116W	DUS3	Q06053	668 aa	Known RBP	6.14	□□□□□ -1.43
ATR1	YML116W	AEP2	P22136	580 aa		6.14	□□□□□ -1.43
ATR1	YML116W	RET1	P22276	1149 aa	Known RBP	6.14	□□□□□ -1.43
ATR1	YML116W	GPT2	P36148	743 aa		6.14	□□□□□ -1.43
ATR1	YML116W	IES1	P43579	692 aa		6.14	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms