RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeastyeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATR1YML116W DRS1P32892 752 aaKnown RBP13.82□□□□□ -0.2
ATR1YML116W MTC1P47018 478 aaKnown RBP13.5□□□□□ -0.25
ATR1YML116W BFR2Q06631 534 aaKnown RBP12.04□□□□□ -0.48
ATR1YML116W DIP2Q12220 943 aaPredicted RBP11.69□□□□□ -0.54
ATR1YML116W AVT3P36062 692 aa11.62□□□□□ -0.55
ATR1YML116W TFA1P36100 482 aa11.53□□□□□ -0.56
ATR1YML116W RSE1Q04693 1361 aaKnown RBP10.92□□□□□ -0.66
ATR1YML116W ISW2Q08773 1120 aa10.88□□□□□ -0.67
ATR1YML116W RPG1P38249 964 aaKnown RBP10.78□□□□□ -0.68
ATR1YML116W FAP1P53971 965 aa10.76□□□□□ -0.69
ATR1YML116W PRI1P10363 409 aa10.71□□□□□ -0.69
ATR1YML116W RPL17AP05740 184 aaKnown RBP10.52□□□□□ -0.73
ATR1YML116W RPL17BP46990 184 aaKnown RBP10.52□□□□□ -0.73
ATR1YML116W AAD16Q02895 342 aa10.47□□□□□ -0.73
ATR1YML116W RQC2Q12532 1038 aaKnown RBP10.46□□□□□ -0.74
ATR1YML116W REB1P21538 810 aa10.33□□□□□ -0.76
ATR1YML116W TSR3Q12094 313 aaKnown RBP10.21□□□□□ -0.78
ATR1YML116W SPT21P35209 758 aa10.19□□□□□ -0.78
ATR1YML116W RIM101P33400 625 aa10.1□□□□□ -0.79
ATR1YML116W PRY3P47033 881 aa10.08□□□□□ -0.8
ATR1YML116W PTP3P40048 928 aa9.9□□□□□ -0.82
ATR1YML116W TAF7Q05021 590 aa9.89□□□□□ -0.83
ATR1YML116W OXP1P28273 1286 aa9.83□□□□□ -0.84
ATR1YML116W YKR023WP36119 530 aaKnown RBP9.82□□□□□ -0.84
ATR1YML116W MRPL32P25348 183 aa9.74□□□□□ -0.85
ATR1YML116W DMA1P38823 416 aa9.74□□□□□ -0.85
ATR1YML116W SSP1P38871 571 aa9.73□□□□□ -0.85
ATR1YML116W YAH1Q12184 172 aaKnown RBP9.67□□□□□ -0.86
ATR1YML116W YCK3P39962 524 aa9.67□□□□□ -0.86
ATR1YML116W HOP09932 586 aa9.61□□□□□ -0.87
ATR1YML116W YIL055CP40523 627 aaKnown RBP9.6□□□□□ -0.87
ATR1YML116W TFC8Q12308 588 aa9.6□□□□□ -0.87
ATR1YML116W YLR271WQ06152 274 aa9.58□□□□□ -0.88
ATR1YML116W DCD1P06773 312 aa9.56□□□□□ -0.88
ATR1YML116W CDC27P38042 758 aa9.56□□□□□ -0.88
ATR1YML116W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
ATR1YML116W HAA1Q12753 694 aaKnown RBP9.49□□□□□ -0.89
ATR1YML116W RSM7P47150 247 aa9.48□□□□□ -0.89
ATR1YML116W MGA2P40578 1113 aa9.35□□□□□ -0.91
ATR1YML116W BCH2P36122 765 aa9.34□□□□□ -0.91
ATR1YML116W CST9Q06032 482 aa9.31□□□□□ -0.92
ATR1YML116W AI2P03876 854 aa9.3□□□□□ -0.92
ATR1YML116W LEO1P38439 464 aa9.3□□□□□ -0.92
ATR1YML116W PSD2P53037 1138 aaKnown RBP9.29□□□□□ -0.92
ATR1YML116W MON2P48563 1636 aaPredicted RBP9.2□□□□□ -0.94
ATR1YML116W EPS1P40557 701 aa9.18□□□□□ -0.94
ATR1YML116W BBC1P47068 1157 aa9.17□□□□□ -0.94
ATR1YML116W BDF1P35817 686 aa9.12□□□□□ -0.95
ATR1YML116W SCY1P53009 804 aa9.12□□□□□ -0.95
ATR1YML116W INO80P53115 1489 aa9.1□□□□□ -0.95
ATR1YML116W MAP2P38174 421 aaKnown RBP9.09□□□□□ -0.95
ATR1YML116W UBP10P53874 792 aaPredicted RBP9.05□□□□□ -0.96
ATR1YML116W MRM1P25270 412 aa9.04□□□□□ -0.96
ATR1YML116W RAM2P29703 316 aa9.01□□□□□ -0.97
ATR1YML116W SAS10Q12136 610 aaPredicted RBP9.01□□□□□ -0.97
ATR1YML116W YGL015CP33199 130 aa9□□□□□ -0.97
ATR1YML116W RCR1P38212 213 aa8.99□□□□□ -0.97
ATR1YML116W RTG3P38165 486 aa8.9□□□□□ -0.99
ATR1YML116W LEU3P08638 886 aa8.89□□□□□ -0.99
ATR1YML116W SLX5P32828 619 aaKnown RBP8.89□□□□□ -0.99
ATR1YML116W VPS29P38759 282 aa8.83□□□□□ -1
ATR1YML116W SET1P38827 1080 aaKnown RBP8.83□□□□□ -1
ATR1YML116W MAK11P20484 414 aaKnown RBP8.79□□□□□ -1
ATR1YML116W SWR1Q05471 1514 aa8.75□□□□□ -1.01
ATR1YML116W DNA2P38859 1522 aa8.74□□□□□ -1.01
ATR1YML116W TY1B-DR4Q07793 1604 aa8.74□□□□□ -1.01
ATR1YML116W YPR148CQ06523 435 aa8.72□□□□□ -1.01
ATR1YML116W STS1P38637 319 aa8.7□□□□□ -1.02
ATR1YML116W YMR1P47147 688 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
ATR1YML116W VPS70P47161 811 aa8.69□□□□□ -1.02
ATR1YML116W DMA2P53924 522 aa8.69□□□□□ -1.02
ATR1YML116W COQ8P27697 501 aa8.69□□□□□ -1.02
ATR1YML116W YFR006WP43590 535 aa8.67□□□□□ -1.02
ATR1YML116W DBP1P24784 617 aaKnown RBP8.65□□□□□ -1.02
ATR1YML116W TCB3Q03640 1545 aaKnown RBP8.64□□□□□ -1.03
ATR1YML116W TIF4632P39936 914 aaKnown RBP8.64□□□□□ -1.03
ATR1YML116W IFH1P39520 1085 aa8.63□□□□□ -1.03
ATR1YML116W EDS1P38073 919 aa8.62□□□□□ -1.03
ATR1YML116W YOR238WQ08634 303 aa8.62□□□□□ -1.03
ATR1YML116W CKB1P43639 278 aa8.62□□□□□ -1.03
ATR1YML116W MIF2P35201 549 aa8.61□□□□□ -1.03
ATR1YML116W ABP1P15891 592 aaKnown RBP8.6□□□□□ -1.03
ATR1YML116W TGL3P40308 642 aa8.6□□□□□ -1.03
ATR1YML116W SPB4P25808 606 aaPredicted RBP8.58□□□□□ -1.04
ATR1YML116W NSR1P27476 414 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
ATR1YML116W KOG1P38873 1557 aa8.57□□□□□ -1.04
ATR1YML116W PIB1Q06651 286 aa8.57□□□□□ -1.04
ATR1YML116W NOP53Q12080 455 aaKnown RBP8.55□□□□□ -1.04
ATR1YML116W RPN1P38764 993 aaKnown RBP8.54□□□□□ -1.04
ATR1YML116W YAP5P40574 245 aa8.54□□□□□ -1.04
ATR1YML116W SGS1P35187 1447 aa8.51□□□□□ -1.05
ATR1YML116W PTC3P34221 468 aaKnown RBP8.51□□□□□ -1.05
ATR1YML116W PBS2P08018 668 aa8.49□□□□□ -1.05
ATR1YML116W DSF2P38213 736 aa8.49□□□□□ -1.05
ATR1YML116W VMA1P17255 1071 aaKnown RBP8.47□□□□□ -1.05
ATR1YML116W REF2P42073 533 aaPredicted RBP8.43□□□□□ -1.06
ATR1YML116W MST1P07236 462 aa8.41□□□□□ -1.06
ATR1YML116W RLF2Q12495 606 aa8.41□□□□□ -1.06
ATR1YML116W HSL1P34244 1518 aa8.38□□□□□ -1.07
ATR1YML116W SAM3Q08986 587 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms