Protein–RNA interactions for Protein: P53297

PBP1, PAB1-binding protein 1, yeastyeast

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PBP1P53297 YML009W-BYML009W-B 477 nt18.49■□□□□ 0.55
PBP1P53297 NSR1YGR159C 1245 nt18.2■□□□□ 0.5
PBP1P53297 NOP1YDL014W 984 nt18.07■□□□□ 0.48
PBP1P53297 YKL036CYKL036C 393 nt16.85■□□□□ 0.29
PBP1P53297 MDJ1YFL016C 1536 nt15.97■□□□□ 0.15
PBP1P53297 Q0297Q0297 156 nt15.87■□□□□ 0.13
PBP1P53297 YJL027CYJL027C 417 nt15.77■□□□□ 0.12
PBP1P53297 SRX1YKL086W 384 nt15.77■□□□□ 0.12
PBP1P53297 SCS3YGL126W 1143 nt15.42■□□□□ 0.06
PBP1P53297 YCR051WYCR051W 669 nt14.99□□□□□ -0.01
PBP1P53297 YOL085CYOL085C 342 nt14.58□□□□□ -0.08
PBP1P53297 PKP1YIL042C 1185 nt14.33□□□□□ -0.12
PBP1P53297 RPP1BYDL130W 321 nt14.24□□□□□ -0.13
PBP1P53297 DBP2YNL112W 1641 nt14.19□□□□□ -0.14
PBP1P53297 TRN1tP(UGG)A 72 nt14.15□□□□□ -0.14
PBP1P53297 SUF9tP(UGG)F 72 nt14.15□□□□□ -0.14
PBP1P53297 SUF8tP(UGG)H 72 nt14.15□□□□□ -0.14
PBP1P53297 tP(UGG)LtP(UGG)L 72 nt14.15□□□□□ -0.14
PBP1P53297 SUF7tP(UGG)M 72 nt14.15□□□□□ -0.14
PBP1P53297 tP(UGG)N1tP(UGG)N1 72 nt14.15□□□□□ -0.14
PBP1P53297 tP(UGG)N2tP(UGG)N2 72 nt14.15□□□□□ -0.14
PBP1P53297 tP(UGG)O1tP(UGG)O1 72 nt14.15□□□□□ -0.14
PBP1P53297 SUF11tP(UGG)O2 72 nt14.15□□□□□ -0.14
PBP1P53297 CCC1YLR220W 969 nt14□□□□□ -0.17
PBP1P53297 Q0182Q0182 405 nt13.97□□□□□ -0.17
PBP1P53297 SCJ1YMR214W 1134 nt13.92□□□□□ -0.18
PBP1P53297 ATS1YAL020C 1002 nt13.85□□□□□ -0.19
PBP1P53297 SSA3YBL075C 1950 nt13.7□□□□□ -0.22
PBP1P53297 PET122YER153C 765 nt13.58□□□□□ -0.24
PBP1P53297 YBR190WYBR190W 312 nt13.57□□□□□ -0.24
PBP1P53297 SCR1SCR1 522 nt13.51□□□□□ -0.25
PBP1P53297 tP(UGG)O3tP(UGG)O3 72 nt13.45□□□□□ -0.26
PBP1P53297 RVS167YDR388W 1449 nt13.44□□□□□ -0.26
PBP1P53297 MOT3YMR070W 1473 nt13.36□□□□□ -0.27
PBP1P53297 RTC3YHR087W 336 nt13.29□□□□□ -0.28
PBP1P53297 RRN5YLR141W 1092 nt13.2□□□□□ -0.3
PBP1P53297 YDJ1YNL064C 1230 nt13.02□□□□□ -0.33
PBP1P53297 RSB1YOR049C 1065 nt13.01□□□□□ -0.33
PBP1P53297 SHR5YOL110W 714 nt13□□□□□ -0.33
PBP1P53297 YER088W-BYER088W-B 147 nt12.95□□□□□ -0.34
PBP1P53297 PST2YDR032C 597 nt12.78□□□□□ -0.36
PBP1P53297 GAR1YHR089C 618 nt12.69□□□□□ -0.38
PBP1P53297 DEP1YAL013W 1218 nt12.55□□□□□ -0.4
PBP1P53297 URN1YPR152C 1398 nt12.51□□□□□ -0.41
PBP1P53297 YKL097CYKL097C 411 nt12.41□□□□□ -0.42
PBP1P53297 RPN10YHR200W 807 nt12.4□□□□□ -0.42
PBP1P53297 YNL208WYNL208W 600 nt12.39□□□□□ -0.43
PBP1P53297 PUT4YOR348C 1884 nt12.3□□□□□ -0.44
PBP1P53297 OPI9YLR338W 858 nt12.28□□□□□ -0.44
PBP1P53297 TIR1YER011W 765 nt12.25□□□□□ -0.45
PBP1P53297 SHU1YHL006C 453 nt12.22□□□□□ -0.45
PBP1P53297 SAH1YER043C 1350 nt12.14□□□□□ -0.47
PBP1P53297 SSA1YAL005C 1929 nt12.05□□□□□ -0.48
PBP1P53297 ARE1YCR048W 1833 nt12□□□□□ -0.49
PBP1P53297 YAL037C-BYAL037C-B 975 nt11.96□□□□□ -0.49
PBP1P53297 YJR018WYJR018W 363 nt11.95□□□□□ -0.5
PBP1P53297 PUN1YLR414C 792 nt11.95□□□□□ -0.5
PBP1P53297 SRB2YHR041C 633 nt11.87□□□□□ -0.51
PBP1P53297 YHR049C-AYHR049C-A 297 nt11.86□□□□□ -0.51
PBP1P53297 POA1YBR022W 534 nt11.86□□□□□ -0.51
PBP1P53297 YOR139CYOR139C 393 nt11.85□□□□□ -0.51
PBP1P53297 RPP2BYDR382W 333 nt11.78□□□□□ -0.52
PBP1P53297 YJR120WYJR120W 351 nt11.78□□□□□ -0.52
PBP1P53297 YGR021WYGR021W 873 nt11.77□□□□□ -0.53
PBP1P53297 PTC2YER089C 1395 nt11.75□□□□□ -0.53
PBP1P53297 NPL3YDR432W 1245 nt11.74□□□□□ -0.53
PBP1P53297 WWM1YFL010C 636 nt11.74□□□□□ -0.53
PBP1P53297 HOM6YJR139C 1080 nt11.71□□□□□ -0.53
PBP1P53297 PAC11YDR488C 1602 nt11.69□□□□□ -0.54
PBP1P53297 MNP1YGL068W 585 nt11.68□□□□□ -0.54
PBP1P53297 BSC6YOL137W 1494 nt11.66□□□□□ -0.54
PBP1P53297 BUD23YCR047C 828 nt11.6□□□□□ -0.55
PBP1P53297 YOL037CYOL037C 354 nt11.59□□□□□ -0.55
PBP1P53297 YFL021C-AYFL021C-A 855 nt11.57□□□□□ -0.56
PBP1P53297 NAB2YGL122C 1578 nt11.56□□□□□ -0.56
PBP1P53297 BDH2YAL061W 1254 nt11.56□□□□□ -0.56
PBP1P53297 NVJ2YPR091C 2313 nt11.56□□□□□ -0.56
PBP1P53297 SSA4YER103W 1929 nt11.56□□□□□ -0.56
PBP1P53297 RKM5YLR137W 1104 nt11.55□□□□□ -0.56
PBP1P53297 SPT5YML010W 3192 nt11.5□□□□□ -0.57
PBP1P53297 INM2YDR287W 879 nt11.5□□□□□ -0.57
PBP1P53297 DAL1YIR027C 1383 nt11.46□□□□□ -0.57
PBP1P53297 LSM3YLR438C-A 270 nt11.45□□□□□ -0.58
PBP1P53297 FPR4YLR449W 1179 nt11.45□□□□□ -0.58
PBP1P53297 FIS1YIL065C 468 nt11.43□□□□□ -0.58
PBP1P53297 YBL100CYBL100C 315 nt11.42□□□□□ -0.58
PBP1P53297 tM(CAU)CtM(CAU)C 72 nt11.38□□□□□ -0.59
PBP1P53297 IMT4tM(CAU)E 72 nt11.38□□□□□ -0.59
PBP1P53297 IMT3tM(CAU)J3 72 nt11.38□□□□□ -0.59
PBP1P53297 IMT1tM(CAU)O1 72 nt11.38□□□□□ -0.59
PBP1P53297 IMT2tM(CAU)P 72 nt11.38□□□□□ -0.59
PBP1P53297 PHO4YFR034C 939 nt11.35□□□□□ -0.59
PBP1P53297 FPS1YLL043W 2010 nt11.34□□□□□ -0.59
PBP1P53297 TRM9YML014W 840 nt11.31□□□□□ -0.6
PBP1P53297 FUN26YAL022C 1554 nt11.29□□□□□ -0.6
PBP1P53297 YLR281CYLR281C 468 nt11.28□□□□□ -0.6
PBP1P53297 BDF1YLR399C 2061 nt11.26□□□□□ -0.61
PBP1P53297 PUS2YGL063W 1113 nt11.24□□□□□ -0.61
PBP1P53297 WHI5YOR083W 888 nt11.22□□□□□ -0.61
PBP1P53297 CCT6YDR188W 1641 nt11.18□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms