RNA–Protein interactions for RNA: YGL111W

NSA1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene NSA1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSA1	YGL111W	YBR238C	P38330	731 aa	Known RBP	4.73	□□□□□ -1.65
NSA1	YGL111W	TSL1	P38427	1098 aa	Known RBP	4.73	□□□□□ -1.65
NSA1	YGL111W	SDP1	P40479	209 aa		4.73	□□□□□ -1.65
NSA1	YGL111W	CDC48	P25694	835 aa	Known RBP	4.72	□□□□□ -1.65
NSA1	YGL111W	ASF1	P32447	279 aa		4.72	□□□□□ -1.65
NSA1	YGL111W	PET112	P33893	541 aa		4.72	□□□□□ -1.65
NSA1	YGL111W	STE13	P33894	931 aa		4.72	□□□□□ -1.65
NSA1	YGL111W	PAM1	P37304	830 aa	Known RBP	4.72	□□□□□ -1.65
NSA1	YGL111W	SSL1	Q04673	461 aa	Predicted RBP	4.72	□□□□□ -1.65
NSA1	YGL111W	TUB3	P09734	445 aa	Known RBP	4.71	□□□□□ -1.66
NSA1	YGL111W	CDC43	P18898	376 aa		4.71	□□□□□ -1.66
NSA1	YGL111W	YKE2	P52553	114 aa		4.71	□□□□□ -1.66
NSA1	YGL111W	SNU71	P53207	620 aa	Known RBP	4.71	□□□□□ -1.66
NSA1	YGL111W	DUS3	Q06053	668 aa	Known RBP	4.71	□□□□□ -1.66
NSA1	YGL111W	ESC2	Q06340	456 aa		4.71	□□□□□ -1.66
NSA1	YGL111W	ARO10	Q06408	635 aa		4.7	□□□□□ -1.66
NSA1	YGL111W	SWM1	Q12379	170 aa		4.7	□□□□□ -1.66
NSA1	YGL111W	MET6	P05694	767 aa	Known RBP	4.69	□□□□□ -1.66
NSA1	YGL111W	CTF8	P38877	133 aa		4.69	□□□□□ -1.66
NSA1	YGL111W	YIL166C	P40445	542 aa		4.69	□□□□□ -1.66
NSA1	YGL111W	VPS30	Q02948	557 aa		4.69	□□□□□ -1.66
NSA1	YGL111W	PCL5	P38794	229 aa		4.68	□□□□□ -1.66
NSA1	YGL111W	RIA1	P53893	1110 aa		4.68	□□□□□ -1.66
NSA1	YGL111W	SEC5	P89102	971 aa		4.68	□□□□□ -1.66
NSA1	YGL111W	KIN3	P22209	435 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	ADY2	P25613	283 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	ABD1	P32783	436 aa	Predicted RBP	4.67	□□□□□ -1.66
NSA1	YGL111W	FKH2	P41813	862 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
NSA1	YGL111W	GLO1	P50107	326 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	MUP1	P50276	574 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	THI7	Q05998	598 aa		4.67	□□□□□ -1.66
NSA1	YGL111W	MNR2	P35724	969 aa		4.66	□□□□□ -1.66
NSA1	YGL111W	MBP1	P39678	833 aa		4.66	□□□□□ -1.66
NSA1	YGL111W	YJL163C	P46996	555 aa		4.66	□□□□□ -1.66
NSA1	YGL111W	YBR053C	P38235	358 aa		4.65	□□□□□ -1.66
NSA1	YGL111W	RPP1	P38786	293 aa		4.65	□□□□□ -1.66
NSA1	YGL111W	YIL108W	P40483	696 aa	Known RBP	4.65	□□□□□ -1.66
NSA1	YGL111W	KRI1	P42846	591 aa	Known RBP	4.65	□□□□□ -1.66
NSA1	YGL111W	YGR053C	P53234	283 aa		4.65	□□□□□ -1.66
NSA1	YGL111W	CRR1	Q05790	422 aa		4.65	□□□□□ -1.66
NSA1	YGL111W	RPD3	P32561	433 aa		4.65	□□□□□ -1.67
NSA1	YGL111W	OYE2	Q03558	400 aa	Known RBP	4.65	□□□□□ -1.67
NSA1	YGL111W	NPP1	P25353	742 aa		4.64	□□□□□ -1.67
NSA1	YGL111W	SBA1	P28707	216 aa	Known RBP	4.64	□□□□□ -1.67
NSA1	YGL111W	NOP7	P53261	605 aa	Known RBP	4.64	□□□□□ -1.67
NSA1	YGL111W	MRPS35	P53292	345 aa		4.64	□□□□□ -1.67
NSA1	YGL111W	AMA1	P50082	593 aa		4.63	□□□□□ -1.67
NSA1	YGL111W	PPH3	P32345	308 aa		4.62	□□□□□ -1.67
NSA1	YGL111W	TYE7	P33122	291 aa	Predicted RBP	4.62	□□□□□ -1.67
NSA1	YGL111W	PRP4	P20053	465 aa	Known RBP	4.61	□□□□□ -1.67
NSA1	YGL111W	AGP1	P25376	633 aa		4.61	□□□□□ -1.67
NSA1	YGL111W	DMC1	P25453	334 aa		4.61	□□□□□ -1.67
NSA1	YGL111W	AFR1	P33304	620 aa		4.61	□□□□□ -1.67
NSA1	YGL111W	YHR078W	P38799	552 aa		4.61	□□□□□ -1.67
NSA1	YGL111W	YKR011C	Q02209	353 aa		4.61	□□□□□ -1.67
NSA1	YGL111W	VPS16	Q03308	798 aa		4.6	□□□□□ -1.67
NSA1	YGL111W	SVF1	Q05515	481 aa		4.6	□□□□□ -1.67
NSA1	YGL111W	YDR306C	Q06640	478 aa		4.6	□□□□□ -1.67
NSA1	YGL111W	FAA4	P47912	694 aa	Known RBP	4.59	□□□□□ -1.67
NSA1	YGL111W	APM1	Q00776	475 aa	Predicted RBP	4.59	□□□□□ -1.67
NSA1	YGL111W	SGO1	Q08490	590 aa		4.59	□□□□□ -1.67
NSA1	YGL111W	RFA1	P22336	621 aa	Known RBP	4.58	□□□□□ -1.68
NSA1	YGL111W	DAM1	P53267	343 aa		4.58	□□□□□ -1.68
NSA1	YGL111W	ASI2	P53895	289 aa		4.58	□□□□□ -1.68
NSA1	YGL111W	IRC13	Q08630	104 aa		4.58	□□□□□ -1.68
NSA1	YGL111W	ADE8	P04161	214 aa		4.57	□□□□□ -1.68
NSA1	YGL111W	SPO11	P23179	398 aa		4.57	□□□□□ -1.68
NSA1	YGL111W	VHR1	P40522	640 aa		4.57	□□□□□ -1.68
NSA1	YGL111W	URA1	P28272	314 aa	Predicted RBP	4.56	□□□□□ -1.68
NSA1	YGL111W	GGA2	P38817	585 aa	Known RBP	4.56	□□□□□ -1.68
NSA1	YGL111W	YIR042C	P40586	236 aa		4.56	□□□□□ -1.68
NSA1	YGL111W	HDA1	P53973	706 aa		4.56	□□□□□ -1.68
NSA1	YGL111W	ORC1	P54784	914 aa	Predicted RBP	4.56	□□□□□ -1.68
NSA1	YGL111W	SSL2	Q00578	843 aa		4.56	□□□□□ -1.68
NSA1	YGL111W	PKH1	Q03407	766 aa		4.56	□□□□□ -1.68
NSA1	YGL111W	MRI1	Q06489	411 aa	Known RBP	4.56	□□□□□ -1.68
NSA1	YGL111W	ORC2	P32833	620 aa		4.55	□□□□□ -1.68
NSA1	YGL111W	SIT1	P39980	628 aa		4.55	□□□□□ -1.68
NSA1	YGL111W	CEP3	P40969	608 aa		4.55	□□□□□ -1.68
NSA1	YGL111W	FAL1	Q12099	399 aa	Known RBP	4.55	□□□□□ -1.68
NSA1	YGL111W	CBR1	P38626	284 aa	Known RBP	4.54	□□□□□ -1.68
NSA1	YGL111W	FMP52	P40008	231 aa		4.54	□□□□□ -1.68
NSA1	YGL111W	CCM1	P48237	864 aa	Predicted RBP	4.54	□□□□□ -1.68
NSA1	YGL111W	HSV2	P50079	448 aa	Predicted RBP	4.54	□□□□□ -1.68
NSA1	YGL111W	TEL2	P53038	688 aa		4.54	□□□□□ -1.68
NSA1	YGL111W	PUS2	P53167	370 aa		4.54	□□□□□ -1.68
NSA1	YGL111W	SMX3	P54999	86 aa	Predicted RBP	4.54	□□□□□ -1.68
NSA1	YGL111W	GDE1	Q02979	1223 aa		4.54	□□□□□ -1.68
NSA1	YGL111W	TAF3	Q12297	353 aa		4.54	□□□□□ -1.68
NSA1	YGL111W	LAT1	P12695	482 aa	Known RBP	4.53	□□□□□ -1.68
NSA1	YGL111W	AAR2	P32357	355 aa	Predicted RBP	4.53	□□□□□ -1.68
NSA1	YGL111W	NGG1	P32494	702 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	VBA5	P36172	582 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	YRO2	P38079	344 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	YJL206C	P39529	758 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	SCS3	P53012	380 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	SHE9	Q04172	456 aa		4.53	□□□□□ -1.68
NSA1	YGL111W	JIP5	Q06214	492 aa	Predicted RBP	4.53	□□□□□ -1.68
NSA1	YGL111W	MPH2	P0CD99	609 aa		4.53	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms