Protein–RNA interactions for Protein: Q03308

VPS16, Vacuolar protein sorting-associated protein 16, yeastyeast

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS16Q03308 NSR1YGR159C 1245 nt20.15■□□□□ 0.82
VPS16Q03308 YML009W-BYML009W-B 477 nt19.82■□□□□ 0.76
VPS16Q03308 NOP1YDL014W 984 nt18.98■□□□□ 0.63
VPS16Q03308 MDJ1YFL016C 1536 nt18.53■□□□□ 0.56
VPS16Q03308 YKL036CYKL036C 393 nt17.2■□□□□ 0.34
VPS16Q03308 YJL027CYJL027C 417 nt17.01■□□□□ 0.31
VPS16Q03308 SRX1YKL086W 384 nt16.57■□□□□ 0.24
VPS16Q03308 Q0297Q0297 156 nt16.4■□□□□ 0.22
VPS16Q03308 DBP2YNL112W 1641 nt16.12■□□□□ 0.17
VPS16Q03308 YBR190WYBR190W 312 nt15.9■□□□□ 0.14
VPS16Q03308 YCR051WYCR051W 669 nt15.72■□□□□ 0.11
VPS16Q03308 SCS3YGL126W 1143 nt15.64■□□□□ 0.09
VPS16Q03308 RTC3YHR087W 336 nt15.57■□□□□ 0.08
VPS16Q03308 SSA3YBL075C 1950 nt15.38■□□□□ 0.05
VPS16Q03308 TRN1tP(UGG)A 72 nt15.35■□□□□ 0.05
VPS16Q03308 SUF9tP(UGG)F 72 nt15.35■□□□□ 0.05
VPS16Q03308 SUF8tP(UGG)H 72 nt15.35■□□□□ 0.05
VPS16Q03308 tP(UGG)LtP(UGG)L 72 nt15.35■□□□□ 0.05
VPS16Q03308 SUF7tP(UGG)M 72 nt15.35■□□□□ 0.05
VPS16Q03308 tP(UGG)N1tP(UGG)N1 72 nt15.35■□□□□ 0.05
VPS16Q03308 tP(UGG)N2tP(UGG)N2 72 nt15.35■□□□□ 0.05
VPS16Q03308 tP(UGG)O1tP(UGG)O1 72 nt15.35■□□□□ 0.05
VPS16Q03308 SUF11tP(UGG)O2 72 nt15.35■□□□□ 0.05
VPS16Q03308 Q0182Q0182 405 nt15.33■□□□□ 0.04
VPS16Q03308 CCC1YLR220W 969 nt15.24■□□□□ 0.03
VPS16Q03308 RVS167YDR388W 1449 nt15.01□□□□□ -0.01
VPS16Q03308 MOT3YMR070W 1473 nt14.93□□□□□ -0.02
VPS16Q03308 PUT4YOR348C 1884 nt14.91□□□□□ -0.02
VPS16Q03308 YOL085CYOL085C 342 nt14.87□□□□□ -0.03
VPS16Q03308 SCJ1YMR214W 1134 nt14.84□□□□□ -0.03
VPS16Q03308 RPP1BYDL130W 321 nt14.73□□□□□ -0.05
VPS16Q03308 PKP1YIL042C 1185 nt14.61□□□□□ -0.07
VPS16Q03308 ARE1YCR048W 1833 nt14.47□□□□□ -0.09
VPS16Q03308 POA1YBR022W 534 nt14.42□□□□□ -0.1
VPS16Q03308 SHR5YOL110W 714 nt14.35□□□□□ -0.11
VPS16Q03308 tP(UGG)O3tP(UGG)O3 72 nt14.34□□□□□ -0.11
VPS16Q03308 URN1YPR152C 1398 nt14.34□□□□□ -0.11
VPS16Q03308 SAH1YER043C 1350 nt14.32□□□□□ -0.12
VPS16Q03308 YHR049C-AYHR049C-A 297 nt14.3□□□□□ -0.12
VPS16Q03308 OPI9YLR338W 858 nt14.22□□□□□ -0.13
VPS16Q03308 BSC6YOL137W 1494 nt14.22□□□□□ -0.13
VPS16Q03308 DEP1YAL013W 1218 nt14.19□□□□□ -0.14
VPS16Q03308 PET122YER153C 765 nt14.17□□□□□ -0.14
VPS16Q03308 ATS1YAL020C 1002 nt14.03□□□□□ -0.16
VPS16Q03308 RPN10YHR200W 807 nt13.96□□□□□ -0.17
VPS16Q03308 SPT5YML010W 3192 nt13.95□□□□□ -0.18
VPS16Q03308 BUD23YCR047C 828 nt13.94□□□□□ -0.18
VPS16Q03308 YNL208WYNL208W 600 nt13.86□□□□□ -0.19
VPS16Q03308 SCR1SCR1 522 nt13.86□□□□□ -0.19
VPS16Q03308 YDJ1YNL064C 1230 nt13.83□□□□□ -0.2
VPS16Q03308 PUN1YLR414C 792 nt13.8□□□□□ -0.2
VPS16Q03308 SSA4YER103W 1929 nt13.78□□□□□ -0.2
VPS16Q03308 PTC2YER089C 1395 nt13.77□□□□□ -0.21
VPS16Q03308 RRN5YLR141W 1092 nt13.7□□□□□ -0.22
VPS16Q03308 GAR1YHR089C 618 nt13.68□□□□□ -0.22
VPS16Q03308 NAB2YGL122C 1578 nt13.65□□□□□ -0.22
VPS16Q03308 YJR018WYJR018W 363 nt13.62□□□□□ -0.23
VPS16Q03308 YER088W-BYER088W-B 147 nt13.42□□□□□ -0.26
VPS16Q03308 FIS1YIL065C 468 nt13.41□□□□□ -0.26
VPS16Q03308 MEP2YNL142W 1500 nt13.39□□□□□ -0.27
VPS16Q03308 FPR4YLR449W 1179 nt13.37□□□□□ -0.27
VPS16Q03308 DAL1YIR027C 1383 nt13.36□□□□□ -0.27
VPS16Q03308 YJR120WYJR120W 351 nt13.29□□□□□ -0.28
VPS16Q03308 RSB1YOR049C 1065 nt13.29□□□□□ -0.28
VPS16Q03308 BDF1YLR399C 2061 nt13.28□□□□□ -0.28
VPS16Q03308 PHO4YFR034C 939 nt13.25□□□□□ -0.29
VPS16Q03308 TIR1YER011W 765 nt13.23□□□□□ -0.29
VPS16Q03308 SSA1YAL005C 1929 nt13.21□□□□□ -0.3
VPS16Q03308 DCW1YKL046C 1350 nt13.2□□□□□ -0.3
VPS16Q03308 RPP2BYDR382W 333 nt13.19□□□□□ -0.3
VPS16Q03308 YPS1YLR120C 1710 nt13.19□□□□□ -0.3
VPS16Q03308 INM2YDR287W 879 nt13.18□□□□□ -0.3
VPS16Q03308 YHR165W-AYHR165W-A 312 nt13.11□□□□□ -0.31
VPS16Q03308 TAT1YBR069C 1860 nt13.1□□□□□ -0.31
VPS16Q03308 YBL100CYBL100C 315 nt13.01□□□□□ -0.33
VPS16Q03308 YDR095CYDR095C 411 nt13□□□□□ -0.33
VPS16Q03308 EMI2YDR516C 1503 nt12.98□□□□□ -0.33
VPS16Q03308 PST2YDR032C 597 nt12.97□□□□□ -0.33
VPS16Q03308 YBR220CYBR220C 1683 nt12.94□□□□□ -0.34
VPS16Q03308 YMR090WYMR090W 684 nt12.93□□□□□ -0.34
VPS16Q03308 SRB2YHR041C 633 nt12.89□□□□□ -0.35
VPS16Q03308 YDL221WYDL221W 552 nt12.84□□□□□ -0.35
VPS16Q03308 FUN26YAL022C 1554 nt12.82□□□□□ -0.36
VPS16Q03308 BDH2YAL061W 1254 nt12.81□□□□□ -0.36
VPS16Q03308 CAC2YML102W 1407 nt12.8□□□□□ -0.36
VPS16Q03308 SDH1YKL148C 1923 nt12.79□□□□□ -0.36
VPS16Q03308 PTP1YDL230W 1008 nt12.77□□□□□ -0.37
VPS16Q03308 ALF1YNL148C 765 nt12.77□□□□□ -0.37
VPS16Q03308 RPP2AYOL039W 321 nt12.76□□□□□ -0.37
VPS16Q03308 TRM9YML014W 840 nt12.68□□□□□ -0.38
VPS16Q03308 PAC11YDR488C 1602 nt12.66□□□□□ -0.38
VPS16Q03308 SCC4YER147C 1875 nt12.63□□□□□ -0.39
VPS16Q03308 IRC15YPL017C 1500 nt12.6□□□□□ -0.39
VPS16Q03308 PCH2YBR186W 1695 nt12.58□□□□□ -0.4
VPS16Q03308 CCT6YDR188W 1641 nt12.57□□□□□ -0.4
VPS16Q03308 WWM1YFL010C 636 nt12.56□□□□□ -0.4
VPS16Q03308 SIS1YNL007C 1059 nt12.56□□□□□ -0.4
VPS16Q03308 GIS3YLR094C 1509 nt12.55□□□□□ -0.4
VPS16Q03308 YKL097CYKL097C 411 nt12.54□□□□□ -0.4
VPS16Q03308 GUT2YIL155C 1950 nt12.53□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms