Protein–RNA interactions for Protein: P38877

CTF8, Chromosome transmission fidelity protein 8, yeastyeast

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF8P38877 NSR1YGR159C 1245 nt18.75■□□□□ 0.59
CTF8P38877 YML009W-BYML009W-B 477 nt18.54■□□□□ 0.56
CTF8P38877 NOP1YDL014W 984 nt17.93■□□□□ 0.46
CTF8P38877 MDJ1YFL016C 1536 nt16.91■□□□□ 0.3
CTF8P38877 YKL036CYKL036C 393 nt16.23■□□□□ 0.19
CTF8P38877 SRX1YKL086W 384 nt15.66■□□□□ 0.1
CTF8P38877 YJL027CYJL027C 417 nt15.61■□□□□ 0.09
CTF8P38877 Q0297Q0297 156 nt15.6■□□□□ 0.09
CTF8P38877 DBP2YNL112W 1641 nt14.85□□□□□ -0.03
CTF8P38877 YCR051WYCR051W 669 nt14.81□□□□□ -0.04
CTF8P38877 SCS3YGL126W 1143 nt14.59□□□□□ -0.07
CTF8P38877 YBR190WYBR190W 312 nt14.54□□□□□ -0.08
CTF8P38877 TRN1tP(UGG)A 72 nt14.35□□□□□ -0.11
CTF8P38877 SUF9tP(UGG)F 72 nt14.35□□□□□ -0.11
CTF8P38877 SUF8tP(UGG)H 72 nt14.35□□□□□ -0.11
CTF8P38877 tP(UGG)LtP(UGG)L 72 nt14.35□□□□□ -0.11
CTF8P38877 SUF7tP(UGG)M 72 nt14.35□□□□□ -0.11
CTF8P38877 tP(UGG)N1tP(UGG)N1 72 nt14.35□□□□□ -0.11
CTF8P38877 tP(UGG)N2tP(UGG)N2 72 nt14.35□□□□□ -0.11
CTF8P38877 tP(UGG)O1tP(UGG)O1 72 nt14.35□□□□□ -0.11
CTF8P38877 SUF11tP(UGG)O2 72 nt14.35□□□□□ -0.11
CTF8P38877 RTC3YHR087W 336 nt14.17□□□□□ -0.14
CTF8P38877 CCC1YLR220W 969 nt14.17□□□□□ -0.14
CTF8P38877 YOL085CYOL085C 342 nt14.07□□□□□ -0.16
CTF8P38877 RPP1BYDL130W 321 nt13.99□□□□□ -0.17
CTF8P38877 RVS167YDR388W 1449 nt13.89□□□□□ -0.19
CTF8P38877 PKP1YIL042C 1185 nt13.87□□□□□ -0.19
CTF8P38877 SCJ1YMR214W 1134 nt13.75□□□□□ -0.21
CTF8P38877 tP(UGG)O3tP(UGG)O3 72 nt13.47□□□□□ -0.25
CTF8P38877 PUT4YOR348C 1884 nt13.44□□□□□ -0.26
CTF8P38877 PET122YER153C 765 nt13.38□□□□□ -0.27
CTF8P38877 SHR5YOL110W 714 nt13.34□□□□□ -0.27
CTF8P38877 SSA3YBL075C 1950 nt13.3□□□□□ -0.28
CTF8P38877 SCR1SCR1 522 nt13.16□□□□□ -0.3
CTF8P38877 URN1YPR152C 1398 nt13.15□□□□□ -0.3
CTF8P38877 ARE1YCR048W 1833 nt13.09□□□□□ -0.31
CTF8P38877 OPI9YLR338W 858 nt13.05□□□□□ -0.32
CTF8P38877 YDJ1YNL064C 1230 nt13.05□□□□□ -0.32
CTF8P38877 DEP1YAL013W 1218 nt13.04□□□□□ -0.32
CTF8P38877 SAH1YER043C 1350 nt13.03□□□□□ -0.32
CTF8P38877 POA1YBR022W 534 nt12.99□□□□□ -0.33
CTF8P38877 RRN5YLR141W 1092 nt12.98□□□□□ -0.33
CTF8P38877 ATS1YAL020C 1002 nt12.97□□□□□ -0.33
CTF8P38877 YHR049C-AYHR049C-A 297 nt12.91□□□□□ -0.34
CTF8P38877 RPN10YHR200W 807 nt12.9□□□□□ -0.34
CTF8P38877 YNL208WYNL208W 600 nt12.83□□□□□ -0.36
CTF8P38877 GAR1YHR089C 618 nt12.78□□□□□ -0.36
CTF8P38877 BSC6YOL137W 1494 nt12.78□□□□□ -0.36
CTF8P38877 YER088W-BYER088W-B 147 nt12.72□□□□□ -0.37
CTF8P38877 PUN1YLR414C 792 nt12.67□□□□□ -0.38
CTF8P38877 RSB1YOR049C 1065 nt12.6□□□□□ -0.39
CTF8P38877 BUD23YCR047C 828 nt12.58□□□□□ -0.4
CTF8P38877 PTC2YER089C 1395 nt12.55□□□□□ -0.4
CTF8P38877 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
CTF8P38877 Q0182Q0182 405 nt12.49□□□□□ -0.41
CTF8P38877 NAB2YGL122C 1578 nt12.43□□□□□ -0.42
CTF8P38877 SPT5YML010W 3192 nt12.42□□□□□ -0.42
CTF8P38877 TIR1YER011W 765 nt12.37□□□□□ -0.43
CTF8P38877 YJR120WYJR120W 351 nt12.28□□□□□ -0.44
CTF8P38877 SSA1YAL005C 1929 nt12.28□□□□□ -0.44
CTF8P38877 FIS1YIL065C 468 nt12.23□□□□□ -0.45
CTF8P38877 DAL1YIR027C 1383 nt12.21□□□□□ -0.45
CTF8P38877 MOT3YMR070W 1473 nt12.21□□□□□ -0.46
CTF8P38877 RPP2BYDR382W 333 nt12.19□□□□□ -0.46
CTF8P38877 INM2YDR287W 879 nt12.15□□□□□ -0.46
CTF8P38877 FPR4YLR449W 1179 nt12.15□□□□□ -0.46
CTF8P38877 SSA4YER103W 1929 nt12.12□□□□□ -0.47
CTF8P38877 PHO4YFR034C 939 nt12.1□□□□□ -0.47
CTF8P38877 PST2YDR032C 597 nt12.08□□□□□ -0.48
CTF8P38877 MEP2YNL142W 1500 nt12.03□□□□□ -0.48
CTF8P38877 SRB2YHR041C 633 nt12.02□□□□□ -0.49
CTF8P38877 YPS1YLR120C 1710 nt11.97□□□□□ -0.49
CTF8P38877 YBL100CYBL100C 315 nt11.96□□□□□ -0.49
CTF8P38877 BDH2YAL061W 1254 nt11.9□□□□□ -0.5
CTF8P38877 YDR095CYDR095C 411 nt11.86□□□□□ -0.51
CTF8P38877 YHR165W-AYHR165W-A 312 nt11.85□□□□□ -0.51
CTF8P38877 DCW1YKL046C 1350 nt11.81□□□□□ -0.52
CTF8P38877 FUN26YAL022C 1554 nt11.81□□□□□ -0.52
CTF8P38877 WWM1YFL010C 636 nt11.77□□□□□ -0.53
CTF8P38877 TRM9YML014W 840 nt11.73□□□□□ -0.53
CTF8P38877 LSM3YLR438C-A 270 nt11.7□□□□□ -0.54
CTF8P38877 ALF1YNL148C 765 nt11.7□□□□□ -0.54
CTF8P38877 BDF1YLR399C 2061 nt11.67□□□□□ -0.54
CTF8P38877 EMI2YDR516C 1503 nt11.67□□□□□ -0.54
CTF8P38877 SHU1YHL006C 453 nt11.65□□□□□ -0.54
CTF8P38877 RPP2AYOL039W 321 nt11.64□□□□□ -0.55
CTF8P38877 CCT6YDR188W 1641 nt11.64□□□□□ -0.55
CTF8P38877 PTP1YDL230W 1008 nt11.63□□□□□ -0.55
CTF8P38877 YGR021WYGR021W 873 nt11.62□□□□□ -0.55
CTF8P38877 YMR090WYMR090W 684 nt11.62□□□□□ -0.55
CTF8P38877 YFL021C-AYFL021C-A 855 nt11.6□□□□□ -0.55
CTF8P38877 CAC2YML102W 1407 nt11.58□□□□□ -0.56
CTF8P38877 YDL221WYDL221W 552 nt11.57□□□□□ -0.56
CTF8P38877 YBR220CYBR220C 1683 nt11.56□□□□□ -0.56
CTF8P38877 SUF2tP(AGG)C 72 nt11.56□□□□□ -0.56
CTF8P38877 SUF10tP(AGG)N 72 nt11.56□□□□□ -0.56
CTF8P38877 HOM6YJR139C 1080 nt11.56□□□□□ -0.56
CTF8P38877 YAL037C-BYAL037C-B 975 nt11.56□□□□□ -0.56
CTF8P38877 SIS1YNL007C 1059 nt11.55□□□□□ -0.56
CTF8P38877 TAT1YBR069C 1860 nt11.52□□□□□ -0.57
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms