Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeastyeast

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBR053CP38235 YML009W-BYML009W-B 477 nt21.38■■□□□ 1.01
YBR053CP38235 NSR1YGR159C 1245 nt21.18■□□□□ 0.98
YBR053CP38235 NOP1YDL014W 984 nt20.82■□□□□ 0.92
YBR053CP38235 YKL036CYKL036C 393 nt19.31■□□□□ 0.68
YBR053CP38235 MDJ1YFL016C 1536 nt18.7■□□□□ 0.58
YBR053CP38235 Q0297Q0297 156 nt18.26■□□□□ 0.51
YBR053CP38235 SRX1YKL086W 384 nt18.2■□□□□ 0.5
YBR053CP38235 YJL027CYJL027C 417 nt18.05■□□□□ 0.48
YBR053CP38235 SCS3YGL126W 1143 nt17.61■□□□□ 0.41
YBR053CP38235 YCR051WYCR051W 669 nt17.3■□□□□ 0.36
YBR053CP38235 YOL085CYOL085C 342 nt16.74■□□□□ 0.27
YBR053CP38235 DBP2YNL112W 1641 nt16.6■□□□□ 0.25
YBR053CP38235 PKP1YIL042C 1185 nt16.49■□□□□ 0.23
YBR053CP38235 RPP1BYDL130W 321 nt16.39■□□□□ 0.21
YBR053CP38235 TRN1tP(UGG)A 72 nt16.38■□□□□ 0.21
YBR053CP38235 SUF9tP(UGG)F 72 nt16.38■□□□□ 0.21
YBR053CP38235 SUF8tP(UGG)H 72 nt16.38■□□□□ 0.21
YBR053CP38235 tP(UGG)LtP(UGG)L 72 nt16.38■□□□□ 0.21
YBR053CP38235 SUF7tP(UGG)M 72 nt16.38■□□□□ 0.21
YBR053CP38235 tP(UGG)N1tP(UGG)N1 72 nt16.38■□□□□ 0.21
YBR053CP38235 tP(UGG)N2tP(UGG)N2 72 nt16.38■□□□□ 0.21
YBR053CP38235 tP(UGG)O1tP(UGG)O1 72 nt16.38■□□□□ 0.21
YBR053CP38235 SUF11tP(UGG)O2 72 nt16.38■□□□□ 0.21
YBR053CP38235 CCC1YLR220W 969 nt16.28■□□□□ 0.2
YBR053CP38235 YBR190WYBR190W 312 nt15.92■□□□□ 0.14
YBR053CP38235 ATS1YAL020C 1002 nt15.8■□□□□ 0.12
YBR053CP38235 SCJ1YMR214W 1134 nt15.7■□□□□ 0.1
YBR053CP38235 PET122YER153C 765 nt15.65■□□□□ 0.1
YBR053CP38235 RTC3YHR087W 336 nt15.6■□□□□ 0.09
YBR053CP38235 RVS167YDR388W 1449 nt15.6■□□□□ 0.09
YBR053CP38235 tP(UGG)O3tP(UGG)O3 72 nt15.56■□□□□ 0.08
YBR053CP38235 SCR1SCR1 522 nt15.5■□□□□ 0.07
YBR053CP38235 RRN5YLR141W 1092 nt15.25■□□□□ 0.03
YBR053CP38235 SHR5YOL110W 714 nt15.08■□□□□ 0
YBR053CP38235 YDJ1YNL064C 1230 nt15.03■□□□□ -0
YBR053CP38235 YER088W-BYER088W-B 147 nt14.93□□□□□ -0.02
YBR053CP38235 RSB1YOR049C 1065 nt14.93□□□□□ -0.02
YBR053CP38235 GAR1YHR089C 618 nt14.71□□□□□ -0.05
YBR053CP38235 DEP1YAL013W 1218 nt14.68□□□□□ -0.06
YBR053CP38235 PST2YDR032C 597 nt14.64□□□□□ -0.07
YBR053CP38235 URN1YPR152C 1398 nt14.63□□□□□ -0.07
YBR053CP38235 YNL208WYNL208W 600 nt14.42□□□□□ -0.1
YBR053CP38235 RPN10YHR200W 807 nt14.4□□□□□ -0.1
YBR053CP38235 OPI9YLR338W 858 nt14.39□□□□□ -0.11
YBR053CP38235 PUT4YOR348C 1884 nt14.39□□□□□ -0.11
YBR053CP38235 SAH1YER043C 1350 nt14.29□□□□□ -0.12
YBR053CP38235 TIR1YER011W 765 nt14.2□□□□□ -0.14
YBR053CP38235 ARE1YCR048W 1833 nt14.16□□□□□ -0.14
YBR053CP38235 YKL097CYKL097C 411 nt14.07□□□□□ -0.16
YBR053CP38235 SSA1YAL005C 1929 nt14.02□□□□□ -0.16
YBR053CP38235 SHU1YHL006C 453 nt14.01□□□□□ -0.17
YBR053CP38235 POA1YBR022W 534 nt13.99□□□□□ -0.17
YBR053CP38235 YJR018WYJR018W 363 nt13.97□□□□□ -0.17
YBR053CP38235 YHR049C-AYHR049C-A 297 nt13.95□□□□□ -0.18
YBR053CP38235 PUN1YLR414C 792 nt13.95□□□□□ -0.18
YBR053CP38235 SRB2YHR041C 633 nt13.82□□□□□ -0.2
YBR053CP38235 YAL037C-BYAL037C-B 975 nt13.82□□□□□ -0.2
YBR053CP38235 PTC2YER089C 1395 nt13.8□□□□□ -0.2
YBR053CP38235 YJR120WYJR120W 351 nt13.75□□□□□ -0.21
YBR053CP38235 RPP2BYDR382W 333 nt13.69□□□□□ -0.22
YBR053CP38235 BUD23YCR047C 828 nt13.68□□□□□ -0.22
YBR053CP38235 BSC6YOL137W 1494 nt13.62□□□□□ -0.23
YBR053CP38235 WWM1YFL010C 636 nt13.62□□□□□ -0.23
YBR053CP38235 NAB2YGL122C 1578 nt13.59□□□□□ -0.23
YBR053CP38235 YGR021WYGR021W 873 nt13.51□□□□□ -0.25
YBR053CP38235 YOR139CYOR139C 393 nt13.51□□□□□ -0.25
YBR053CP38235 HOM6YJR139C 1080 nt13.49□□□□□ -0.25
YBR053CP38235 INM2YDR287W 879 nt13.46□□□□□ -0.25
YBR053CP38235 MNP1YGL068W 585 nt13.44□□□□□ -0.26
YBR053CP38235 BDH2YAL061W 1254 nt13.44□□□□□ -0.26
YBR053CP38235 FPR4YLR449W 1179 nt13.43□□□□□ -0.26
YBR053CP38235 DAL1YIR027C 1383 nt13.42□□□□□ -0.26
YBR053CP38235 SSA3YBL075C 1950 nt13.38□□□□□ -0.27
YBR053CP38235 NPL3YDR432W 1245 nt13.36□□□□□ -0.27
YBR053CP38235 FIS1YIL065C 468 nt13.36□□□□□ -0.27
YBR053CP38235 YFL021C-AYFL021C-A 855 nt13.35□□□□□ -0.27
YBR053CP38235 YBL100CYBL100C 315 nt13.33□□□□□ -0.28
YBR053CP38235 RKM5YLR137W 1104 nt13.29□□□□□ -0.28
YBR053CP38235 LSM3YLR438C-A 270 nt13.29□□□□□ -0.28
YBR053CP38235 PHO4YFR034C 939 nt13.28□□□□□ -0.28
YBR053CP38235 YOL037CYOL037C 354 nt13.21□□□□□ -0.29
YBR053CP38235 TRM9YML014W 840 nt13.2□□□□□ -0.3
YBR053CP38235 FUN26YAL022C 1554 nt13.19□□□□□ -0.3
YBR053CP38235 CCT6YDR188W 1641 nt13.02□□□□□ -0.32
YBR053CP38235 YPS1YLR120C 1710 nt13□□□□□ -0.33
YBR053CP38235 tM(CAU)CtM(CAU)C 72 nt13□□□□□ -0.33
YBR053CP38235 IMT4tM(CAU)E 72 nt13□□□□□ -0.33
YBR053CP38235 IMT3tM(CAU)J3 72 nt13□□□□□ -0.33
YBR053CP38235 IMT1tM(CAU)O1 72 nt13□□□□□ -0.33
YBR053CP38235 IMT2tM(CAU)P 72 nt13□□□□□ -0.33
YBR053CP38235 YLR281CYLR281C 468 nt12.96□□□□□ -0.33
YBR053CP38235 ALF1YNL148C 765 nt12.96□□□□□ -0.33
YBR053CP38235 YDR095CYDR095C 411 nt12.92□□□□□ -0.34
YBR053CP38235 WHI5YOR083W 888 nt12.91□□□□□ -0.34
YBR053CP38235 SPT5YML010W 3192 nt12.9□□□□□ -0.34
YBR053CP38235 PUS2YGL063W 1113 nt12.89□□□□□ -0.35
YBR053CP38235 SUF2tP(AGG)C 72 nt12.89□□□□□ -0.35
YBR053CP38235 SUF10tP(AGG)N 72 nt12.89□□□□□ -0.35
YBR053CP38235 YHR165W-AYHR165W-A 312 nt12.86□□□□□ -0.35
YBR053CP38235 YLR154C-GYLR154C-G 150 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms