Protein–RNA interactions for Protein: P38330

YBR238C, Protein RMD9-like, mitochondrial, yeastyeast

Known RBP Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBR238CP38330 YML009W-BYML009W-B 477 nt19.47■□□□□ 0.71
YBR238CP38330 NOP1YDL014W 984 nt19.27■□□□□ 0.68
YBR238CP38330 NSR1YGR159C 1245 nt19.09■□□□□ 0.65
YBR238CP38330 YKL036CYKL036C 393 nt18.22■□□□□ 0.51
YBR238CP38330 YJL027CYJL027C 417 nt17.06■□□□□ 0.32
YBR238CP38330 Q0297Q0297 156 nt17.02■□□□□ 0.32
YBR238CP38330 SRX1YKL086W 384 nt16.81■□□□□ 0.28
YBR238CP38330 SCS3YGL126W 1143 nt16.78■□□□□ 0.28
YBR238CP38330 MDJ1YFL016C 1536 nt16.74■□□□□ 0.27
YBR238CP38330 YCR051WYCR051W 669 nt15.9■□□□□ 0.14
YBR238CP38330 YOL085CYOL085C 342 nt15.71■□□□□ 0.11
YBR238CP38330 SCJ1YMR214W 1134 nt15.7■□□□□ 0.1
YBR238CP38330 PKP1YIL042C 1185 nt15.31■□□□□ 0.04
YBR238CP38330 RPP1BYDL130W 321 nt15.25■□□□□ 0.03
YBR238CP38330 ATS1YAL020C 1002 nt15.17■□□□□ 0.02
YBR238CP38330 TRN1tP(UGG)A 72 nt14.87□□□□□ -0.03
YBR238CP38330 SUF9tP(UGG)F 72 nt14.87□□□□□ -0.03
YBR238CP38330 SUF8tP(UGG)H 72 nt14.87□□□□□ -0.03
YBR238CP38330 tP(UGG)LtP(UGG)L 72 nt14.87□□□□□ -0.03
YBR238CP38330 SUF7tP(UGG)M 72 nt14.87□□□□□ -0.03
YBR238CP38330 tP(UGG)N1tP(UGG)N1 72 nt14.87□□□□□ -0.03
YBR238CP38330 tP(UGG)N2tP(UGG)N2 72 nt14.87□□□□□ -0.03
YBR238CP38330 tP(UGG)O1tP(UGG)O1 72 nt14.87□□□□□ -0.03
YBR238CP38330 SUF11tP(UGG)O2 72 nt14.87□□□□□ -0.03
YBR238CP38330 DBP2YNL112W 1641 nt14.87□□□□□ -0.03
YBR238CP38330 CCC1YLR220W 969 nt14.72□□□□□ -0.05
YBR238CP38330 SCR1SCR1 522 nt14.53□□□□□ -0.08
YBR238CP38330 PET122YER153C 765 nt14.43□□□□□ -0.1
YBR238CP38330 tP(UGG)O3tP(UGG)O3 72 nt14.21□□□□□ -0.13
YBR238CP38330 YBR190WYBR190W 312 nt14.21□□□□□ -0.13
YBR238CP38330 RVS167YDR388W 1449 nt14.1□□□□□ -0.15
YBR238CP38330 RTC3YHR087W 336 nt14.1□□□□□ -0.15
YBR238CP38330 RRN5YLR141W 1092 nt14.07□□□□□ -0.16
YBR238CP38330 PST2YDR032C 597 nt13.97□□□□□ -0.17
YBR238CP38330 RSB1YOR049C 1065 nt13.95□□□□□ -0.18
YBR238CP38330 YDJ1YNL064C 1230 nt13.83□□□□□ -0.2
YBR238CP38330 YER088W-BYER088W-B 147 nt13.81□□□□□ -0.2
YBR238CP38330 YKL097CYKL097C 411 nt13.72□□□□□ -0.21
YBR238CP38330 SSA3YBL075C 1950 nt13.65□□□□□ -0.22
YBR238CP38330 SHR5YOL110W 714 nt13.63□□□□□ -0.23
YBR238CP38330 Q0182Q0182 405 nt13.53□□□□□ -0.24
YBR238CP38330 GAR1YHR089C 618 nt13.33□□□□□ -0.28
YBR238CP38330 SHU1YHL006C 453 nt13.23□□□□□ -0.29
YBR238CP38330 DEP1YAL013W 1218 nt13.18□□□□□ -0.3
YBR238CP38330 MOT3YMR070W 1473 nt13.16□□□□□ -0.3
YBR238CP38330 URN1YPR152C 1398 nt13.11□□□□□ -0.31
YBR238CP38330 RPN10YHR200W 807 nt13□□□□□ -0.33
YBR238CP38330 YNL208WYNL208W 600 nt13□□□□□ -0.33
YBR238CP38330 YOR139CYOR139C 393 nt12.99□□□□□ -0.33
YBR238CP38330 TIR1YER011W 765 nt12.89□□□□□ -0.35
YBR238CP38330 OPI9YLR338W 858 nt12.87□□□□□ -0.35
YBR238CP38330 NPL3YDR432W 1245 nt12.84□□□□□ -0.35
YBR238CP38330 YAL037C-BYAL037C-B 975 nt12.77□□□□□ -0.37
YBR238CP38330 PUT4YOR348C 1884 nt12.76□□□□□ -0.37
YBR238CP38330 SAH1YER043C 1350 nt12.73□□□□□ -0.37
YBR238CP38330 SSA1YAL005C 1929 nt12.65□□□□□ -0.38
YBR238CP38330 YGR021WYGR021W 873 nt12.59□□□□□ -0.39
YBR238CP38330 YOL037CYOL037C 354 nt12.59□□□□□ -0.39
YBR238CP38330 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
YBR238CP38330 YJR018WYJR018W 363 nt12.53□□□□□ -0.4
YBR238CP38330 PUN1YLR414C 792 nt12.52□□□□□ -0.41
YBR238CP38330 HOM6YJR139C 1080 nt12.49□□□□□ -0.41
YBR238CP38330 tM(CAU)CtM(CAU)C 72 nt12.48□□□□□ -0.41
YBR238CP38330 IMT4tM(CAU)E 72 nt12.48□□□□□ -0.41
YBR238CP38330 IMT3tM(CAU)J3 72 nt12.48□□□□□ -0.41
YBR238CP38330 IMT1tM(CAU)O1 72 nt12.48□□□□□ -0.41
YBR238CP38330 IMT2tM(CAU)P 72 nt12.48□□□□□ -0.41
YBR238CP38330 SRB2YHR041C 633 nt12.45□□□□□ -0.42
YBR238CP38330 YHR049C-AYHR049C-A 297 nt12.42□□□□□ -0.42
YBR238CP38330 MNP1YGL068W 585 nt12.41□□□□□ -0.42
YBR238CP38330 RPP2BYDR382W 333 nt12.36□□□□□ -0.43
YBR238CP38330 POA1YBR022W 534 nt12.36□□□□□ -0.43
YBR238CP38330 WWM1YFL010C 636 nt12.35□□□□□ -0.43
YBR238CP38330 YJR120WYJR120W 351 nt12.34□□□□□ -0.43
YBR238CP38330 PTC2YER089C 1395 nt12.32□□□□□ -0.44
YBR238CP38330 RKM5YLR137W 1104 nt12.31□□□□□ -0.44
YBR238CP38330 YFL021C-AYFL021C-A 855 nt12.27□□□□□ -0.45
YBR238CP38330 BSC6YOL137W 1494 nt12.2□□□□□ -0.46
YBR238CP38330 PUS2YGL063W 1113 nt12.18□□□□□ -0.46
YBR238CP38330 BUD23YCR047C 828 nt12.17□□□□□ -0.46
YBR238CP38330 YLR281CYLR281C 468 nt12.17□□□□□ -0.46
YBR238CP38330 BDH2YAL061W 1254 nt12.13□□□□□ -0.47
YBR238CP38330 NAB2YGL122C 1578 nt12.13□□□□□ -0.47
YBR238CP38330 SPT5YML010W 3192 nt12.1□□□□□ -0.47
YBR238CP38330 MRPL8YJL063C 717 nt12.07□□□□□ -0.48
YBR238CP38330 INM2YDR287W 879 nt12.05□□□□□ -0.48
YBR238CP38330 LSM3YLR438C-A 270 nt12.05□□□□□ -0.48
YBR238CP38330 WHI5YOR083W 888 nt12.03□□□□□ -0.48
YBR238CP38330 FPR4YLR449W 1179 nt12.02□□□□□ -0.49
YBR238CP38330 DAL1YIR027C 1383 nt12.02□□□□□ -0.49
YBR238CP38330 SSA4YER103W 1929 nt12□□□□□ -0.49
YBR238CP38330 YBL100CYBL100C 315 nt11.98□□□□□ -0.49
YBR238CP38330 FIS1YIL065C 468 nt11.95□□□□□ -0.5
YBR238CP38330 IMP2'YIL154C 1041 nt11.93□□□□□ -0.5
YBR238CP38330 PHO4YFR034C 939 nt11.89□□□□□ -0.51
YBR238CP38330 TRM9YML014W 840 nt11.88□□□□□ -0.51
YBR238CP38330 DSK2YMR276W 1122 nt11.87□□□□□ -0.51
YBR238CP38330 FMP45YDL222C 930 nt11.86□□□□□ -0.51
YBR238CP38330 FUN26YAL022C 1554 nt11.84□□□□□ -0.51
YBR238CP38330 YCH1YGR203W 447 nt11.84□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms