RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W PET111P08468 800 aa8.14□□□□□ -1.11
SNF7YLR025W PRO3P32263 286 aaKnown RBP8.14□□□□□ -1.11
SNF7YLR025W YKL222CP35995 705 aa8.14□□□□□ -1.11
SNF7YLR025W YGL138CP53122 345 aa8.14□□□□□ -1.11
SNF7YLR025W FOL1P53848 824 aa8.14□□□□□ -1.11
SNF7YLR025W VPS30Q02948 557 aa8.14□□□□□ -1.11
SNF7YLR025W RBA50Q04418 439 aa8.14□□□□□ -1.11
SNF7YLR025W PNP1Q05788 311 aa8.14□□□□□ -1.11
SNF7YLR025W COG4Q06096 861 aa8.14□□□□□ -1.11
SNF7YLR025W YLR346CQ06139 101 aa8.14□□□□□ -1.11
SNF7YLR025W SPP382Q06411 708 aaPredicted RBP8.14□□□□□ -1.11
SNF7YLR025W YLH47Q06493 454 aa8.14□□□□□ -1.11
SNF7YLR025W SLK19Q08581 821 aaKnown RBP8.14□□□□□ -1.11
SNF7YLR025W RRP6Q12149 733 aaKnown RBP8.14□□□□□ -1.11
SNF7YLR025W RRG1Q12167 365 aaPredicted RBP8.14□□□□□ -1.11
SNF7YLR025W GIN4Q12263 1142 aa8.14□□□□□ -1.11
SNF7YLR025W OM45P16547 393 aa8.13□□□□□ -1.11
SNF7YLR025W PHO13P19881 312 aa8.13□□□□□ -1.11
SNF7YLR025W HIR1P32479 840 aa8.13□□□□□ -1.11
SNF7YLR025W YKU70P32807 602 aa8.13□□□□□ -1.11
SNF7YLR025W YET1P35723 206 aa8.13□□□□□ -1.11
SNF7YLR025W EFM2P38347 419 aa8.13□□□□□ -1.11
SNF7YLR025W VPS45P38932 577 aa8.13□□□□□ -1.11
SNF7YLR025W STT3P39007 718 aaKnown RBP8.13□□□□□ -1.11
SNF7YLR025W CCT3P39077 534 aaKnown RBP8.13□□□□□ -1.11
SNF7YLR025W ALA1P40825 983 aaKnown RBP8.13□□□□□ -1.11
SNF7YLR025W UBA2P52488 636 aa8.13□□□□□ -1.11
SNF7YLR025W DSE4P53753 1117 aa8.13□□□□□ -1.11
SNF7YLR025W MDM1Q01846 1127 aa8.13□□□□□ -1.11
SNF7YLR025W EBS1Q03466 884 aaKnown RBP8.13□□□□□ -1.11
SNF7YLR025W DSE3Q08729 430 aa8.13□□□□□ -1.11
SNF7YLR025W PSO2P30620 661 aa8.12□□□□□ -1.11
SNF7YLR025W DAL1P32375 460 aa8.12□□□□□ -1.11
SNF7YLR025W SUV3P32580 737 aa8.12□□□□□ -1.11
SNF7YLR025W PCH2P38126 564 aa8.12□□□□□ -1.11
SNF7YLR025W BCD1P38772 366 aa8.12□□□□□ -1.11
SNF7YLR025W RTT107P38850 1070 aa8.12□□□□□ -1.11
SNF7YLR025W SSN3P39073 555 aa8.12□□□□□ -1.11
SNF7YLR025W VTC2P43585 828 aa8.12□□□□□ -1.11
SNF7YLR025W VTC4P47075 721 aa8.12□□□□□ -1.11
SNF7YLR025W YJR098CP47139 656 aa8.12□□□□□ -1.11
SNF7YLR025W YGR237CP50089 785 aa8.12□□□□□ -1.11
SNF7YLR025W UTP5Q04177 643 aaKnown RBP8.12□□□□□ -1.11
SNF7YLR025W PMD1P32634 1753 aa8.12□□□□□ -1.11
SNF7YLR025W NUC1P08466 329 aa8.11□□□□□ -1.11
SNF7YLR025W RPL8AP17076 256 aaKnown RBP8.11□□□□□ -1.11
SNF7YLR025W GSY1P23337 708 aa8.11□□□□□ -1.11
SNF7YLR025W PRE8P23639 250 aa8.11□□□□□ -1.11
SNF7YLR025W RPS7AP26786 190 aaKnown RBP8.11□□□□□ -1.11
SNF7YLR025W REI1P38344 393 aaPredicted RBP8.11□□□□□ -1.11
SNF7YLR025W TPS3P38426 1054 aaKnown RBP8.11□□□□□ -1.11
SNF7YLR025W DAK2P43550 591 aa8.11□□□□□ -1.11
SNF7YLR025W SMC3P47037 1230 aa8.11□□□□□ -1.11
SNF7YLR025W LSB1P53281 241 aa8.11□□□□□ -1.11
SNF7YLR025W ALF1P53904 254 aa8.11□□□□□ -1.11
SNF7YLR025W OPY2Q06810 360 aa8.11□□□□□ -1.11
SNF7YLR025W SRM1P21827 482 aa8.1□□□□□ -1.11
SNF7YLR025W ICL1P28240 557 aaPredicted RBP8.1□□□□□ -1.11
SNF7YLR025W SRB4P32569 687 aa8.1□□□□□ -1.11
SNF7YLR025W YKL091CP33324 310 aaKnown RBP8.1□□□□□ -1.11
SNF7YLR025W STO1P34160 861 aaKnown RBP8.1□□□□□ -1.11
SNF7YLR025W SMC2P38989 1170 aaKnown RBP8.1□□□□□ -1.11
SNF7YLR025W LYS14P40971 790 aa8.1□□□□□ -1.11
SNF7YLR025W RET3P53600 189 aa8.1□□□□□ -1.11
SNF7YLR025W UBP2Q01476 1272 aa8.1□□□□□ -1.11
SNF7YLR025W VIP1Q06685 1146 aaKnown RBP8.1□□□□□ -1.11
SNF7YLR025W PCL8Q08966 492 aa8.1□□□□□ -1.11
SNF7YLR025W NOP14Q99207 810 aaKnown RBP8.1□□□□□ -1.11
SNF7YLR025W MTF2P10849 440 aa8.09□□□□□ -1.11
SNF7YLR025W UBC1P21734 215 aaKnown RBP8.09□□□□□ -1.11
SNF7YLR025W YEL043WP32618 956 aa8.09□□□□□ -1.11
SNF7YLR025W CAF130P53280 1122 aaPredicted RBP8.09□□□□□ -1.11
SNF7YLR025W NSG2P53898 299 aa8.09□□□□□ -1.11
SNF7YLR025W YDL124WQ07551 312 aaKnown RBP8.09□□□□□ -1.11
SNF7YLR025W PLP2Q12017 286 aa8.09□□□□□ -1.11
SNF7YLR025W SMC6Q12749 1114 aa8.09□□□□□ -1.11
SNF7YLR025W FIG2P25653 1609 aa8.09□□□□□ -1.11
SNF7YLR025W TOP1P04786 769 aa8.08□□□□□ -1.12
SNF7YLR025W CTT1P06115 562 aa8.08□□□□□ -1.12
SNF7YLR025W DPB3P27344 201 aa8.08□□□□□ -1.12
SNF7YLR025W RRP1P35178 278 aaPredicted RBP8.08□□□□□ -1.12
SNF7YLR025W PET10P36139 283 aa8.08□□□□□ -1.12
SNF7YLR025W MIP6P38760 659 aaKnown RBP8.08□□□□□ -1.12
SNF7YLR025W RRB1Q04225 511 aaKnown RBP8.08□□□□□ -1.12
SNF7YLR025W CRF1Q04930 467 aa8.08□□□□□ -1.12
SNF7YLR025W SML1Q04964 104 aa8.08□□□□□ -1.12
SNF7YLR025W SPO75Q07798 868 aa8.08□□□□□ -1.12
SNF7YLR025W HMI1Q12039 706 aa8.08□□□□□ -1.12
SNF7YLR025W FOB1O13329 566 aa8.07□□□□□ -1.12
SNF7YLR025W SPO11P23179 398 aa8.07□□□□□ -1.12
SNF7YLR025W RRN6P32786 894 aa8.07□□□□□ -1.12
SNF7YLR025W AFG2P32794 780 aa8.07□□□□□ -1.12
SNF7YLR025W SCD5P34758 872 aa8.07□□□□□ -1.12
SNF7YLR025W AHP1P38013 176 aaKnown RBP8.07□□□□□ -1.12
SNF7YLR025W ERT1P38140 529 aa8.07□□□□□ -1.12
SNF7YLR025W YBL028CP38202 106 aa8.07□□□□□ -1.12
SNF7YLR025W CST26P38226 397 aa8.07□□□□□ -1.12
SNF7YLR025W SEC9P40357 651 aa8.07□□□□□ -1.12
SNF7YLR025W ASE1P50275 885 aa8.07□□□□□ -1.12
SNF7YLR025W CBK1P53894 756 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms