RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM5, Length 282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM5YER146W YEL025CP39991 1188 aa9.73□□□□□ -0.85
LSM5YER146W VFA1P40080 203 aa9.73□□□□□ -0.85
LSM5YER146W ALF1P53904 254 aa9.73□□□□□ -0.85
LSM5YER146W YLR225CQ05948 407 aaKnown RBP9.73□□□□□ -0.85
LSM5YER146W NEW1Q08972 1196 aaKnown RBP9.73□□□□□ -0.85
LSM5YER146W FAL1Q12099 399 aaKnown RBP9.73□□□□□ -0.85
LSM5YER146W TRM11Q12463 433 aa9.73□□□□□ -0.85
LSM5YER146W TIF6Q12522 245 aaKnown RBP9.73□□□□□ -0.85
LSM5YER146W SSB1P11484 613 aaKnown RBP9.72□□□□□ -0.85
LSM5YER146W PHO8P11491 566 aa9.72□□□□□ -0.85
LSM5YER146W MRF1P30775 413 aaPredicted RBP9.72□□□□□ -0.85
LSM5YER146W CCC2P38995 1004 aa9.72□□□□□ -0.85
LSM5YER146W SSB2P40150 613 aaKnown RBP9.72□□□□□ -0.85
LSM5YER146W MDR1P53258 950 aa9.72□□□□□ -0.85
LSM5YER146W TOF1P53840 1238 aa9.72□□□□□ -0.85
LSM5YER146W COQ9Q05779 260 aa9.72□□□□□ -0.85
LSM5YER146W YCG1Q06680 1035 aa9.72□□□□□ -0.85
LSM5YER146W PLP2Q12017 286 aa9.72□□□□□ -0.85
LSM5YER146W APL4Q12028 832 aa9.72□□□□□ -0.85
LSM5YER146W DBP5P20449 482 aaKnown RBP9.71□□□□□ -0.86
LSM5YER146W PRE10P21242 288 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
LSM5YER146W COT1P32798 439 aa9.71□□□□□ -0.86
LSM5YER146W RTT107P38850 1070 aa9.71□□□□□ -0.86
LSM5YER146W SPT8P38915 602 aa9.71□□□□□ -0.86
LSM5YER146W LCB2P40970 561 aa9.71□□□□□ -0.86
LSM5YER146W SPO75Q07798 868 aa9.71□□□□□ -0.86
LSM5YER146W RLP24Q07915 199 aaKnown RBP9.71□□□□□ -0.86
LSM5YER146W SMC5Q08204 1093 aa9.71□□□□□ -0.86
LSM5YER146W CDC53Q12018 815 aaKnown RBP9.71□□□□□ -0.86
LSM5YER146W CWC2Q12046 339 aaPredicted RBP9.71□□□□□ -0.86
LSM5YER146W SRF1Q12516 437 aa9.71□□□□□ -0.86
LSM5YER146W KIN82P25341 720 aa9.7□□□□□ -0.86
LSM5YER146W NAM7P30771 971 aaKnown RBP9.7□□□□□ -0.86
LSM5YER146W SDS3P40505 327 aa9.7□□□□□ -0.86
LSM5YER146W CCM1P48237 864 aaPredicted RBP9.7□□□□□ -0.86
LSM5YER146W MSC6Q08818 692 aaKnown RBP9.7□□□□□ -0.86
LSM5YER146W DED1P06634 604 aaKnown RBP9.69□□□□□ -0.86
LSM5YER146W KTR2P33550 425 aa9.69□□□□□ -0.86
LSM5YER146W VPS35P34110 944 aa9.69□□□□□ -0.86
LSM5YER146W RPC25P35718 212 aa9.69□□□□□ -0.86
LSM5YER146W MNR2P35724 969 aa9.69□□□□□ -0.86
LSM5YER146W VPS53P47061 822 aa9.69□□□□□ -0.86
LSM5YER146W RPS7BP48164 190 aaKnown RBP9.69□□□□□ -0.86
LSM5YER146W SCS3P53012 380 aa9.69□□□□□ -0.86
LSM5YER146W TAM41P53230 385 aa9.69□□□□□ -0.86
LSM5YER146W ERG5P54781 538 aa9.69□□□□□ -0.86
LSM5YER146W DON1Q05610 365 aa9.69□□□□□ -0.86
LSM5YER146W YLR287CQ05881 355 aa9.69□□□□□ -0.86
LSM5YER146W ATG9Q12142 997 aa9.69□□□□□ -0.86
LSM5YER146W EFT1P32324 842 aaKnown RBP9.68□□□□□ -0.86
LSM5YER146W ATG19P35193 415 aa9.68□□□□□ -0.86
LSM5YER146W ATG1P53104 897 aa9.68□□□□□ -0.86
LSM5YER146W YML020WQ03722 664 aa9.68□□□□□ -0.86
LSM5YER146W VPS38Q05919 439 aa9.68□□□□□ -0.86
LSM5YER146W ESC2Q06340 456 aa9.68□□□□□ -0.86
LSM5YER146W MET7Q08645 548 aa9.68□□□□□ -0.86
LSM5YER146W PPR1P07272 904 aaPredicted RBP9.67□□□□□ -0.86
LSM5YER146W POX1P13711 748 aa9.67□□□□□ -0.86
LSM5YER146W SEC23P15303 768 aaKnown RBP9.67□□□□□ -0.86
LSM5YER146W PCH2P38126 564 aa9.67□□□□□ -0.86
LSM5YER146W YGR130CP53278 816 aa9.67□□□□□ -0.86
LSM5YER146W IES4Q08561 116 aa9.67□□□□□ -0.86
LSM5YER146W NCR1Q12200 1170 aa9.67□□□□□ -0.86
LSM5YER146W SCP160P06105 1222 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
LSM5YER146W TUP1P16649 713 aa9.66□□□□□ -0.86
LSM5YER146W SPO12P17123 173 aa9.66□□□□□ -0.86
LSM5YER146W UBC1P21734 215 aaKnown RBP9.66□□□□□ -0.86
LSM5YER146W CDC48P25694 835 aaKnown RBP9.66□□□□□ -0.86
LSM5YER146W DPH2P32461 534 aa9.66□□□□□ -0.86
LSM5YER146W ERC1P38767 581 aa9.66□□□□□ -0.86
LSM5YER146W SHQ1P40486 507 aaPredicted RBP9.66□□□□□ -0.86
LSM5YER146W YAP5P40574 245 aa9.66□□□□□ -0.86
LSM5YER146W AVT1P47082 602 aa9.66□□□□□ -0.86
LSM5YER146W JSN1P47135 1091 aaKnown RBP RIP-Chip data9.66□□□□□ -0.86not detected
LSM5YER146W COS5P47187 383 aa9.66□□□□□ -0.86
LSM5YER146W RTT102P53330 157 aa9.66□□□□□ -0.86
LSM5YER146W UME1Q03010 460 aa9.66□□□□□ -0.86
LSM5YER146W GIR2Q03768 265 aaPredicted RBP9.66□□□□□ -0.86
LSM5YER146W YLR297WQ05899 129 aa9.66□□□□□ -0.86
LSM5YER146W ICL2Q12031 575 aa9.66□□□□□ -0.86
LSM5YER146W RRP6Q12149 733 aaKnown RBP9.66□□□□□ -0.86
LSM5YER146W ATG3P40344 310 aa9.65□□□□□ -0.86
LSM5YER146W EFM4P40516 257 aa9.65□□□□□ -0.86
LSM5YER146W TAD1P53065 400 aa9.65□□□□□ -0.86
LSM5YER146W SHE10P53075 577 aa9.65□□□□□ -0.86
LSM5YER146W VTC3Q02725 835 aa9.65□□□□□ -0.86
LSM5YER146W SVF1Q05515 481 aa9.65□□□□□ -0.86
LSM5YER146W ECM7Q06200 448 aa9.65□□□□□ -0.86
LSM5YER146W GPI13Q07830 1017 aa9.65□□□□□ -0.86
LSM5YER146W NOC3Q07896 663 aaPredicted RBP9.65□□□□□ -0.86
LSM5YER146W YLL058WQ12198 575 aa9.65□□□□□ -0.86
LSM5YER146W IRE1P32361 1115 aa9.64□□□□□ -0.87
LSM5YER146W HXT1P32465 570 aa9.64□□□□□ -0.87
LSM5YER146W FLR1P38124 548 aa9.64□□□□□ -0.87
LSM5YER146W AIM21P40563 679 aa9.64□□□□□ -0.87
LSM5YER146W DUS1P53759 423 aaKnown RBP9.64□□□□□ -0.87
LSM5YER146W ESBP6P53918 673 aa9.64□□□□□ -0.87
LSM5YER146W TIM8P57744 87 aa9.64□□□□□ -0.87
LSM5YER146W CSR1Q06705 408 aaKnown RBP9.64□□□□□ -0.87
LSM5YER146W YDR461C-AQ2V2P7 80 aa9.64□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms