RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YDL121CQ07541 149 aa3.78□□□□□ -1.8
YIR040CYIR040C HSP42Q12329 375 aa3.78□□□□□ -1.8
YIR040CYIR040C DFG16Q99234 619 aa3.78□□□□□ -1.8
YIR040CYIR040C YER152CP10356 443 aa3.77□□□□□ -1.81
YIR040CYIR040C SNF5P18480 905 aa3.77□□□□□ -1.81
YIR040CYIR040C DBP5P20449 482 aaKnown RBP3.77□□□□□ -1.81
YIR040CYIR040C MLS1P30952 554 aa3.77□□□□□ -1.81
YIR040CYIR040C MDL2P33311 773 aa3.77□□□□□ -1.81
YIR040CYIR040C TFC3P34111 1160 aa3.77□□□□□ -1.81
YIR040CYIR040C SAS3P34218 831 aa3.77□□□□□ -1.81
YIR040CYIR040C SEG2P34250 1132 aa3.77□□□□□ -1.81
YIR040CYIR040C PAM1P37304 830 aaKnown RBP3.77□□□□□ -1.81
YIR040CYIR040C TPM2P40414 161 aa3.77□□□□□ -1.81
YIR040CYIR040C MPH1P40562 993 aa3.77□□□□□ -1.81
YIR040CYIR040C CNN1P43618 361 aa3.77□□□□□ -1.81
YIR040CYIR040C AVT1P47082 602 aa3.77□□□□□ -1.81
YIR040CYIR040C ORC3P54790 616 aa3.77□□□□□ -1.81
YIR040CYIR040C GDE1Q02979 1223 aa3.77□□□□□ -1.81
YIR040CYIR040C TIF35Q04067 274 aaKnown RBP3.77□□□□□ -1.81
YIR040CYIR040C AOS1Q06624 347 aa3.77□□□□□ -1.81
YIR040CYIR040C ETT1Q08421 412 aaKnown RBP3.77□□□□□ -1.81
YIR040CYIR040C SGT2Q12118 346 aaKnown RBP3.77□□□□□ -1.81
YIR040CYIR040C SPO21Q12411 609 aa3.77□□□□□ -1.81
YIR040CYIR040C ERP4Q12450 207 aa3.77□□□□□ -1.81
YIR040CYIR040C KAR1P11927 433 aa3.76□□□□□ -1.81
YIR040CYIR040C SRO9P25567 434 aaKnown RBP3.76□□□□□ -1.81
YIR040CYIR040C PWP2P25635 923 aaKnown RBP3.76□□□□□ -1.81
YIR040CYIR040C RAD27P26793 382 aa3.76□□□□□ -1.81
YIR040CYIR040C SAP190P36123 1033 aa3.76□□□□□ -1.81
YIR040CYIR040C RGD1P38339 666 aa3.76□□□□□ -1.81
YIR040CYIR040C TAF1P46677 1066 aa3.76□□□□□ -1.81
YIR040CYIR040C PRP43P53131 767 aaKnown RBP3.76□□□□□ -1.81
YIR040CYIR040C TNA1P53322 534 aa3.76□□□□□ -1.81
YIR040CYIR040C YNL247WP53852 767 aaKnown RBP3.76□□□□□ -1.81
YIR040CYIR040C CEF1Q03654 590 aaPredicted RBP3.76□□□□□ -1.81
YIR040CYIR040C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
YIR040CYIR040C RSC58Q07979 502 aa3.76□□□□□ -1.81
YIR040CYIR040C YPL260WQ08977 551 aa3.76□□□□□ -1.81
YIR040CYIR040C YDL177CQ12257 170 aa3.76□□□□□ -1.81
YIR040CYIR040C CLF1Q12309 687 aaPredicted RBP3.76□□□□□ -1.81
YIR040CYIR040C TRP2P00899 507 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C AIM26P32858 118 aa3.75□□□□□ -1.81
YIR040CYIR040C MNR2P35724 969 aa3.75□□□□□ -1.81
YIR040CYIR040C BAP2P38084 609 aa3.75□□□□□ -1.81
YIR040CYIR040C MUM2P38236 366 aa3.75□□□□□ -1.81
YIR040CYIR040C SEC9P40357 651 aa3.75□□□□□ -1.81
YIR040CYIR040C NNF1P47149 201 aa3.75□□□□□ -1.81
YIR040CYIR040C FAA4P47912 694 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C KEL2P50090 882 aa3.75□□□□□ -1.81
YIR040CYIR040C BNI5P53890 448 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C HOS3Q02959 697 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C HEL2Q05580 639 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C ENT2Q05785 613 aa3.75□□□□□ -1.81
YIR040CYIR040C GGA1Q06336 557 aa3.75□□□□□ -1.81
YIR040CYIR040C YPR172WQ06608 200 aa3.75□□□□□ -1.81
YIR040CYIR040C TMA46Q12000 345 aaKnown RBP3.75□□□□□ -1.81
YIR040CYIR040C TY1B-AO13527 1196 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C THR4P16120 514 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C RPA135P22138 1203 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C PUF4P25339 888 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
YIR040CYIR040C RNQ1P25367 405 aa3.74□□□□□ -1.81
YIR040CYIR040C RPL5P26321 297 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C EFB1P32471 206 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C LYP1P32487 611 aa3.74□□□□□ -1.81
YIR040CYIR040C SWI3P32591 825 aa3.74□□□□□ -1.81
YIR040CYIR040C STE5P32917 917 aa3.74□□□□□ -1.81
YIR040CYIR040C MOT2P34909 587 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C BYE1P36106 594 aa3.74□□□□□ -1.81
YIR040CYIR040C RPC37P36121 282 aa3.74□□□□□ -1.81
YIR040CYIR040C ABZ1P37254 787 aaPredicted RBP3.74□□□□□ -1.81
YIR040CYIR040C MCM7P38132 845 aa3.74□□□□□ -1.81
YIR040CYIR040C PMC1P38929 1173 aaPredicted RBP3.74□□□□□ -1.81
YIR040CYIR040C RPN3P40016 523 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C AIM20P40451 204 aa3.74□□□□□ -1.81
YIR040CYIR040C ECL1P48235 211 aa3.74□□□□□ -1.81
YIR040CYIR040C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
YIR040CYIR040C ECM16Q04217 1267 aaKnown RBP3.74□□□□□ -1.81
YIR040CYIR040C COG4Q06096 861 aa3.74□□□□□ -1.81
YIR040CYIR040C ESC2Q06340 456 aa3.74□□□□□ -1.81
YIR040CYIR040C YPL066WQ12194 479 aa3.74□□□□□ -1.81
YIR040CYIR040C GLE1Q12315 538 aa3.74□□□□□ -1.81
YIR040CYIR040C COQ4O13525 335 aa3.73□□□□□ -1.81
YIR040CYIR040C CLC1P17891 233 aa3.73□□□□□ -1.81
YIR040CYIR040C RPN12P32496 274 aa3.73□□□□□ -1.81
YIR040CYIR040C ELM1P32801 640 aa3.73□□□□□ -1.81
YIR040CYIR040C TSA1P34760 196 aaKnown RBP3.73□□□□□ -1.81
YIR040CYIR040C OCA5P38738 679 aa3.73□□□□□ -1.81
YIR040CYIR040C ETP1P38748 585 aaKnown RBP3.73□□□□□ -1.81
YIR040CYIR040C HNT2P49775 206 aa3.73□□□□□ -1.81
YIR040CYIR040C YGR053CP53234 283 aa3.73□□□□□ -1.81
YIR040CYIR040C VTC3Q02725 835 aa3.73□□□□□ -1.81
YIR040CYIR040C VPS16Q03308 798 aa3.73□□□□□ -1.81
YIR040CYIR040C PRP3Q03338 469 aaPredicted RBP3.73□□□□□ -1.81
YIR040CYIR040C JIP5Q06214 492 aaPredicted RBP3.73□□□□□ -1.81
YIR040CYIR040C CDA2Q06703 312 aa3.73□□□□□ -1.81
YIR040CYIR040C APC5Q08683 685 aa3.73□□□□□ -1.81
YIR040CYIR040C CEX1Q12453 761 aa3.73□□□□□ -1.81
YIR040CYIR040C INO1P11986 533 aa3.72□□□□□ -1.81
YIR040CYIR040C GAS1P22146 559 aaKnown RBP3.72□□□□□ -1.81
YIR040CYIR040C DBP2P24783 546 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms