RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C CHS3P29465 1165 aa3.96□□□□□ -1.78
TRS120YDR407C SER1P33330 395 aaKnown RBP3.96□□□□□ -1.78
TRS120YDR407C RIM8P53179 542 aa3.96□□□□□ -1.78
TRS120YDR407C ARP5P53946 755 aa3.96□□□□□ -1.78
TRS120YDR407C TAF9Q05027 157 aa3.96□□□□□ -1.78
TRS120YDR407C OSH2Q12451 1283 aa3.96□□□□□ -1.78
TRS120YDR407C TGL1P34163 548 aa3.95□□□□□ -1.78
TRS120YDR407C PGM2P37012 569 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C RPG1P38249 964 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C AXL1P40851 1208 aa3.95□□□□□ -1.78
TRS120YDR407C GPD2P41911 440 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C SDA1P53313 767 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C DON1Q05610 365 aa3.95□□□□□ -1.78
TRS120YDR407C UTP13Q05946 817 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C VIP1Q06685 1146 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C YDJ1P25491 409 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C BEM3P32873 1128 aa3.95□□□□□ -1.78
TRS120YDR407C LAS1P36146 502 aaPredicted RBP3.95□□□□□ -1.78
TRS120YDR407C PHO86P46956 311 aa3.95□□□□□ -1.78
TRS120YDR407C CUS1Q02554 436 aaPredicted RBP3.95□□□□□ -1.78
TRS120YDR407C RNT1Q02555 471 aa3.95□□□□□ -1.78
TRS120YDR407C DPL1Q05567 589 aa3.95□□□□□ -1.78
TRS120YDR407C ILV2P07342 687 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C CDC60P26637 1090 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C TRK2P28584 889 aa3.95□□□□□ -1.78
TRS120YDR407C CDC11P32458 415 aa3.95□□□□□ -1.78
TRS120YDR407C RAD54P32863 898 aa3.95□□□□□ -1.78
TRS120YDR407C SIC1P38634 284 aa3.95□□□□□ -1.78
TRS120YDR407C MAD1P40957 749 aa3.95□□□□□ -1.78
TRS120YDR407C YGL081WP53156 320 aa3.95□□□□□ -1.78
TRS120YDR407C FOL1P53848 824 aa3.95□□□□□ -1.78
TRS120YDR407C ADE12P80210 433 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C MTG1Q03151 367 aaPredicted RBP3.95□□□□□ -1.78
TRS120YDR407C ADY4Q05955 493 aa3.95□□□□□ -1.78
TRS120YDR407C STI1P15705 589 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
TRS120YDR407C AVT3P36062 692 aa3.95□□□□□ -1.78
TRS120YDR407C PET10P36139 283 aa3.95□□□□□ -1.78
TRS120YDR407C SMX2P40204 77 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C ARK1P53974 638 aa3.95□□□□□ -1.78
TRS120YDR407C LAM6Q08001 693 aa3.95□□□□□ -1.78
TRS120YDR407C SLK19Q08581 821 aaKnown RBP3.95□□□□□ -1.78
TRS120YDR407C GIS3Q12418 502 aa3.95□□□□□ -1.78
TRS120YDR407C PCK1P10963 549 aa3.94□□□□□ -1.78
TRS120YDR407C KIP2P28743 706 aa3.94□□□□□ -1.78
TRS120YDR407C GLN1P32288 370 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C FRD1P32614 470 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C SPT21P35209 758 aa3.94□□□□□ -1.78
TRS120YDR407C YJL045WP47052 634 aa3.94□□□□□ -1.78
TRS120YDR407C ENT3P47160 408 aa3.94□□□□□ -1.78
TRS120YDR407C PKH1Q03407 766 aa3.94□□□□□ -1.78
TRS120YDR407C RRI2Q12348 645 aa3.94□□□□□ -1.78
TRS120YDR407C NOT5Q12514 560 aaPredicted RBP3.94□□□□□ -1.78
TRS120YDR407C HCA4P20448 770 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C BUD31P25337 157 aaPredicted RBP3.94□□□□□ -1.78
TRS120YDR407C PDB1P32473 366 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C POL31P46957 487 aa3.94□□□□□ -1.78
TRS120YDR407C ZAP1P47043 880 aa3.94□□□□□ -1.78
TRS120YDR407C YNL040WP53960 456 aaPredicted RBP3.94□□□□□ -1.78
TRS120YDR407C ORC4P54791 529 aa3.94□□□□□ -1.78
TRS120YDR407C UME1Q03010 460 aa3.94□□□□□ -1.78
TRS120YDR407C BUL2Q03758 920 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C FMN1Q03778 218 aa3.94□□□□□ -1.78
TRS120YDR407C UTP5Q04177 643 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C TRS120Q04183 1289 aa3.94□□□□□ -1.78
TRS120YDR407C RRB1Q04225 511 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C YLR297WQ05899 129 aa3.94□□□□□ -1.78
TRS120YDR407C NOB1Q08444 459 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C STT4P37297 1900 aa3.94□□□□□ -1.78
TRS120YDR407C RPB2P08518 1224 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C PET123P17558 318 aa3.94□□□□□ -1.78
TRS120YDR407C CDC42P19073 191 aa3.94□□□□□ -1.78
TRS120YDR407C PDC6P26263 563 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C SMY1P32364 656 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C PTC3P34221 468 aaKnown RBP3.94□□□□□ -1.78
TRS120YDR407C REI1P38344 393 aaPredicted RBP3.94□□□□□ -1.78
TRS120YDR407C VHR2P40041 505 aa3.94□□□□□ -1.78
TRS120YDR407C NDC80P40460 691 aa3.94□□□□□ -1.78
TRS120YDR407C YMR1P47147 688 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
TRS120YDR407C AAD16Q02895 342 aa3.94□□□□□ -1.78
TRS120YDR407C VPS16Q03308 798 aa3.94□□□□□ -1.78
TRS120YDR407C NCA2Q12374 616 aa3.94□□□□□ -1.78
TRS120YDR407C SEC21P32074 935 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C PRP40P33203 583 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C YKL091CP33324 310 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C ASG1P40467 964 aa3.93□□□□□ -1.78
TRS120YDR407C YJL107CP42947 387 aa3.93□□□□□ -1.78
TRS120YDR407C VID30P53076 958 aa3.93□□□□□ -1.78
TRS120YDR407C YNL058CP53947 316 aa3.93□□□□□ -1.78
TRS120YDR407C OYE2Q03558 400 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C MTF2P10849 440 aa3.93□□□□□ -1.78
TRS120YDR407C SUV3P32580 737 aa3.93□□□□□ -1.78
TRS120YDR407C MRP4P32902 394 aa3.93□□□□□ -1.78
TRS120YDR407C SRP101P32916 621 aa3.93□□□□□ -1.78
TRS120YDR407C YAP5P40574 245 aa3.93□□□□□ -1.78
TRS120YDR407C MDJ2P42834 146 aa3.93□□□□□ -1.78
TRS120YDR407C LYS4P49367 693 aaPredicted RBP3.93□□□□□ -1.78
TRS120YDR407C SUB1P54000 292 aaKnown RBP3.93□□□□□ -1.78
TRS120YDR407C PTA1Q01329 785 aaPredicted RBP3.93□□□□□ -1.78
TRS120YDR407C SOV1Q04748 898 aa3.93□□□□□ -1.78
TRS120YDR407C YDR278CQ05612 105 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 112.7 ms